Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20castellanii_20[genbank_20GCA_5F000193105.1_202011-03- 22] 1,521 sequences; 46,714,639 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq932 143 3e-29 seq447 141 1e-28 seq422 140 4e-28 seq1445 138 1e-27 seq1224 138 1e-27 seq1223 138 1e-27 seq1225 132 6e-26 seq1307 131 2e-25 seq638 129 7e-25 seq623 125 8e-24 seq414 125 8e-24 seq1357 104 3e-17 seq1356 104 3e-17 seq513 82.4 9e-11 >seq932 Length=1165899 Score = 143 bits (158), Expect = 3e-29 Identities = 147/192 (77%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || || ||||| || |||||||| || |||| || |||||||| |||||||| Sbjct 391077 TCCTTCTGGATGTTGTAGTCGGCCAGAGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAG 391136 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 ||||| ||||||||||| | || | || ||||||||| || ||||| || | || Sbjct 391137 ATGAGACGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGAATCTTTTGCTTAACGTTC 391196 Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | ||||||||||| || || |||| |||||||| ||||| || || ||||| || Sbjct 391197 TCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACG 391256 Query 43173 AAGATTTGCAtt 43184 ||||| |||||| Sbjct 391257 AAGATCTGCATT 391268 Score = 123 bits (136), Expect = 3e-23 Identities = 145/195 (74%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || ||||| || || |||| || |||||||| || ||||| Sbjct 390620 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCTTCGAGCTGCTTGCCGGCGAA 390679 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | ||| | || |||||||||| ||| || || || | | Sbjct 390680 GATGAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 390739 Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | |||||| |||| || || |||| ||||| || ||||| || |||||||| Sbjct 390740 TTCGATCGTGTCCGAGCTC---TCGACCTCGAGGGTGATAGTCTTGCCGGTCAGCGTCTT 390796 Query 43169 TACAAAGATTTGCAt 43183 || ||||| ||||| Sbjct 390797 GACGAAGATCTGCAT 390811 Score = 118 bits (130), Expect = 1e-21 Identities = 144/195 (74%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || ||||| || || |||| || |||||||| || ||||| Sbjct 390848 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCTTCGAGCTGCTTGCCGGCGAA 390907 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | ||| | || |||||||||| ||| || || || | | Sbjct 390908 GATGAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 390967 Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | |||||| |||| || || |||| |||||||| || || || || ||||| Sbjct 390968 TTCGATCGTGTCGGAGCTC---TCGACCTCGAGGGTGATGGTCTTACCGGTCAGAGTCTT 391024 Query 43169 TACAAAGATTTGCAt 43183 || ||||| ||||| Sbjct 391025 GACGAAGATCTGCAT 391039 >seq447 Length=587387 Score = 141 bits (156), Expect = 1e-28 Identities = 149/196 (76%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| ||||| ||||| || |||| || |||||||| || ||||| Sbjct 241046 CTCCTTCTGGATGTTGTAGTCAGCAAGAGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAA 240987 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| |||||||| || | || | || |||||||||| || || || || | | Sbjct 240986 GATGAGACGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGAATCTTCTGCTTCACGTT 240927 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | |||||||||||| || || |||| |||||||| ||||| || || ||||| || Sbjct 240926 CTCGATCGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCAC 240867 Query 43172 AAAGATTTGCAttttt 43187 ||||| |||||| || Sbjct 240866 GAAGATCTGCATTGTT 240851 Score = 134 bits (148), Expect = 2e-26 Identities = 145/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || |||| || |||||||| || ||||| Sbjct 241274 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 241215 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || ||||||||||||| || | | |||||||||| || ||||| |||| | Sbjct 241214 GATAAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTGAATCTTTTGCTTGACGTT 241155 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | ||||||||| || || || |||| ||||| || ||||| || |||||||| || Sbjct 241154 CTCGATCGTGTCGCTGGACTCGACCTCGAGGGTGATAGTCTTGCCGGTCAGCGTCTTGAC 241095 Query 43172 AAAGATTTGCAt 43183 ||||| ||||| Sbjct 241094 GAAGATCTGCAT 241083 Score = 134 bits (148), Expect = 2e-26 Identities = 145/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || |||||||| || |||| || |||||||| |||||||| Sbjct 241502 CTCCTTCTGGATGTTGTAGTCGGCCAGAGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAA 241443 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | | |||||||||| ||| || || || | | Sbjct 241442 GATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 241383 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | ||||||| ||| || || |||| ||||| || || ||||| || ||||| || Sbjct 241382 CTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTACCCGTGAGGGTCTTGAC 241323 Query 43172 AAAGATTTGCAt 43183 ||||| ||||| Sbjct 241322 GAAGATCTGCAT 241311 >seq422 Length=916903 Score = 140 bits (154), Expect = 4e-28 Identities = 146/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| |||||||| || || |||| || |||||||| || ||||| Sbjct 624961 CTCCTTCTGGATGTTGTAGTCAGCCAGGGTACGGCCGTCCTCGAGCTGCTTTCCGGCGAA 624902 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||||| || | | ||| |||||| || || || |||| | Sbjct 624901 GATGAGGCGCTGCTGGTCGGGAGGAATACCCTCTTTGTCCTGAATCTTCTGCTTGACGTT 624842 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | ||||||||| || || || |||| ||||| || ||||| || |||||||| || Sbjct 624841 CTCGATCGTGTCGCTGGACTCTACCTCGAGGGTGATAGTCTTGCCGGTCAGCGTCTTGAC 624782 Query 43172 AAAGATTTGCAt 43183 ||||| ||||| Sbjct 624781 GAAGATCTGCAT 624770 Score = 138 bits (152), Expect = 1e-27 Identities = 148/196 (76%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || |||| || |||||||| || ||||| Sbjct 624505 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 624446 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| |||||||| |||| || | | |||||||||| || || || |||| | Sbjct 624445 GATGAGACGCTGCTGATCGGGAGGAATACCCTCCTTGTCCTGAATCTTCTGCTTGACGTT 624386 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | |||||||||||| || || |||| |||||||| ||||| || || ||||| || Sbjct 624385 CTCGATCGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 624326 Query 43172 AAAGATTTGCAttttt 43187 ||||| |||||| || Sbjct 624325 GAAGATCTGCATTGTT 624310 Score = 136 bits (150), Expect = 5e-27 Identities = 147/195 (75%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || |||| || |||||||| || ||||| Sbjct 210707 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAA 210766 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||||| || | | |||||||||| ||| || || || | | Sbjct 210767 GATGAGACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 210826 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | |||||||| || || || |||| |||||||| ||||| || || ||||| || Sbjct 210827 CTCGATGGTGTCGCTGGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCAC 210886 Query 43172 AAAGATTTGCAtttt 43186 ||||||||||| || Sbjct 210887 GAAGATTTGCATGTT 210901 Score = 109 bits (120), Expect = 6e-19 Identities = 142/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || |||| || |||||||| |||||||| Sbjct 624733 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAA 624674 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | | |||||||||| ||| || || || | | Sbjct 624673 GATGAGACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 624614 Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | ||||| |||| || || |||| |||||||| ||||| || || ||||| Sbjct 624613 TTCGATGGTGTCCGAGCTC---TCGACCTCGAGGGTGATGGTCTTGCCGGTCAGAGTCTT 624557 Query 43169 TACAAAGATTTGCAt 43183 || ||||| ||||| Sbjct 624556 GACGAAGATCTGCAT 624542 Score = 104 bits (114), Expect = 3e-17 Identities = 140/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || || ||||| || || || || || |||| || |||||||| || ||||| Sbjct 210480 TCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAG 210539 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 ||||| ||||||||||||| || | | |||||||||| ||| || || || | || Sbjct 210540 ATGAGACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTC 210599 Query 43113 GCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 43169 | | ||||| |||| || || |||| ||||| || || || || || ||||| Sbjct 210600 TCGATGGTGTCGGAGCTC---TCGACCTCGAGGGTGATCGTCTTACCGGTCAGAGTCTTG 210656 Query 43170 ACAAAGATTTGCAt 43183 || ||||| ||||| Sbjct 210657 ACGAAGATCTGCAT 210670 >seq1445 Length=562458 Score = 138 bits (152), Expect = 1e-27 Identities = 148/196 (76%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || |||| || ||||||||||||||||| Sbjct 27911 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCGTCCTCAAGCTGCTTACCAGCGAA 27852 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| |||||||| || | || | | |||||||||| || ||||| || | | Sbjct 27851 GATGAGACGCTGCTGATCAGGGGGAATACCCTCCTTGTCCTGAATCTTTTGCTTCACGTT 27792 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | ||||||||||| || || |||| |||||||| ||||| || || ||||| || Sbjct 27791 CTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 27732 Query 43172 AAAGATTTGCAttttt 43187 ||||| |||||| || Sbjct 27731 GAAGATCTGCATTGTT 27716 >seq1224 Length=756 Score = 138 bits (152), Expect = 1e-27 Identities = 148/196 (76%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || |||| || |||||||| |||||||| Sbjct 562 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAA 503 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||||| || | | |||||||||| ||| || || |||| | Sbjct 502 GATGAGACGCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTGGATCTTCTGCTTGACGTT 443 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | |||||| ||| || || |||| |||||||| ||||| || || ||||| || Sbjct 442 CTCGATGGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCAC 383 Query 43172 AAAGATTTGCAttttt 43187 ||||| |||||| || Sbjct 382 GAAGATCTGCATTGTT 367 Score = 104 bits (114), Expect = 3e-17 Identities = 117/157 (75%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 43027 CGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCT 43086 |||| || |||||||| |||||||| ||||| ||||||||||| | || | | ||||| Sbjct 755 CGTCTTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCAGGGGGAATACCCTCCT 696 Query 43087 TGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146 ||||| ||| || || || | || | | || ||||| || || || |||| |||| Sbjct 695 TGTCCTGGATCTTCTGCTTCACGTTCTCAATGGTATCGCTGGACTCGACCTCGAGGGTGA 636 Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAt 43183 | || ||||| || || ||||| || ||||| ||||| Sbjct 635 TCGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 599 >seq1223 Length=762 Score = 138 bits (152), Expect = 1e-27 Identities = 148/196 (76%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || |||| || ||||||||||||||||| Sbjct 530 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCGTCCTCAAGCTGCTTACCAGCGAA 589 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| |||||||| || | || | | |||||||||| || ||||| || | | Sbjct 590 GATGAGACGCTGCTGATCAGGGGGAATACCCTCCTTGTCCTGAATCTTTTGCTTCACGTT 649 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | ||||||||||| || || |||| |||||||| ||||| || || ||||| || Sbjct 650 CTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 709 Query 43172 AAAGATTTGCAttttt 43187 ||||| |||||| || Sbjct 710 GAAGATCTGCATTGTT 725 >seq1225 Length=780 Score = 132 bits (146), Expect = 6e-26 Identities = 147/196 (75%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || |||| || |||||||| || ||||| Sbjct 595 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 536 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| |||||||| |||| || | | |||||||||| || || || || | | Sbjct 535 GATGAGACGCTGCTGATCGGGAGGAATACCCTCCTTGTCCTGAATCTTCTGCTTCACGTT 476 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | |||||||||||| || || |||| |||||||| ||||| || || ||||| || Sbjct 475 CTCGATCGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 416 Query 43172 AAAGATTTGCAttttt 43187 ||||| |||||| || Sbjct 415 GAAGATCTGCATTGTT 400 Score = 86.0 bits (94), Expect = 7e-12 Identities = 111/152 (73%), Gaps = 6/152 (4%) Strand=Plus/Minus Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 |||||||| |||||||| ||||| ||||||||||| | || | | |||||||||| | Sbjct 780 AGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGG 721 Query 43095 ATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTT 43151 || || || || | | | | ||||| |||| || || |||| |||||||| Sbjct 720 ATCTTCTGCTTCACGTTTTCGATGGTGTCCGAGCTC---TCGACCTCGAGGGTGATGGTC 664 Query 43152 TTGCCCGTTAGCGTCTTTACAAAGATTTGCAt 43183 ||||| || || ||||| || ||||| ||||| Sbjct 663 TTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 632 >seq1307 Length=263854 Score = 131 bits (144), Expect = 2e-25 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || |||| || |||||||| |||||||| Sbjct 170132 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAA 170191 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | | |||||||||| ||| || || || | | Sbjct 170192 GATGAGACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 170251 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | ||||||| ||| || || |||| |||||||| ||||| || || ||||| || Sbjct 170252 CTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTGAC 170311 Query 43172 AAAGATTTGCAt 43183 ||||| ||||| Sbjct 170312 GAAGATCTGCAT 170323 Score = 131 bits (144), Expect = 2e-25 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || |||| || ||||||||||||||||| Sbjct 170588 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCGTCCTCAAGCTGCTTACCAGCGAA 170647 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| |||||||| || | || | | |||||||||| || || || || | | Sbjct 170648 GATGAGACGCTGCTGATCAGGGGGAATACCCTCCTTGTCCTGAATCTTCTGCTTCACGTT 170707 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | |||||||| || || || |||| |||||||| ||||| ||||| ||||| || Sbjct 170708 CTCGATGGTGTCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTTAGGGTCTTGAC 170767 Query 43172 AAAGATTTGCAt 43183 ||||| ||||| Sbjct 170768 GAAGATCTGCAT 170779 >seq638 Length=1393837 Score = 129 bits (142), Expect = 7e-25 Identities = 146/196 (74%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || |||| || |||||||| || ||||| Sbjct 263062 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAA 263121 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || ||||||||||||| || | || ||||||||| || || || || | | Sbjct 263122 GATAAGACGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGAATCTTCTGCTTCACGTT 263181 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | ||||||||||| || || |||| |||||||| ||||| || || ||||| || Sbjct 263182 CTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCAC 263241 Query 43172 AAAGATTTGCAttttt 43187 ||||| |||||| || Sbjct 263242 GAAGATCTGCATTGTT 263257 Score = 125 bits (138), Expect = 8e-24 Identities = 143/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || |||| || |||||||| |||||||| Sbjct 262834 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCGTCTTCGAGCTGCTTGCCAGCGAA 262893 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | | |||||||||| ||| || || || | | Sbjct 262894 GATGAGACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 262953 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | || |||||||| || || |||| || || || ||||| || || ||||| || Sbjct 262954 CTCGATGGTATCGCTCGACTCGACCTCGAGAGTAATCGTCTTGCCGGTAAGGGTCTTGAC 263013 Query 43172 AAAGATTTGCAt 43183 |||||| ||||| Sbjct 263014 AAAGATCTGCAT 263025 Score = 114 bits (126), Expect = 1e-20 Identities = 143/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || |||| || |||||||| || ||||| Sbjct 262606 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 262665 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || ||||||||||||| || | || |||||||||| ||| || || || | | Sbjct 262666 GATCAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACATT 262725 Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | | |||||| |||| || || |||| ||||| || || || || |||||||| Sbjct 262726 CTCGATCGTGTCCGAGCTC---TCGACCTCGAGGGTGATCGTCTTACCGGTCAGCGTCTT 262782 Query 43169 TACAAAGATTTGCAt 43183 || ||||| ||||| Sbjct 262783 GACGAAGATCTGCAT 262797 >seq623 Length=316623 Score = 125 bits (138), Expect = 8e-24 Identities = 152/206 (74%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 42981 TGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGC 43040 |||| ||| |||||| || || ||||| || ||||| || || |||| || |||||| Sbjct 68363 TGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGC 68422 Query 43041 TTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTT 43100 || |||||||| ||||| ||||||||||||| || | || |||||||||| ||| || Sbjct 68423 TTGCCAGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTC 68482 Query 43101 TGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCC 43157 || || | | | | ||||| |||| || || |||| |||||||| ||||| Sbjct 68483 TGCTTCACGTTTTCGATGGTGTCCGAGCTC---TCGACCTCGAGGGTGATGGTCTTGCCG 68539 Query 43158 GTTAGCGTCTTTACAAAGATTTGCAt 43183 || || ||||| || ||||| ||||| Sbjct 68540 GTGAGGGTCTTCACGAAGATCTGCAT 68565 >seq414 Length=771140 Score = 125 bits (138), Expect = 8e-24 Identities = 143/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || |||| || |||||||| |||||||| Sbjct 166732 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAA 166673 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| |||||||| || | || | | |||||||||| || || || || | | Sbjct 166672 GATGAGACGCTGCTGATCAGGGGGAATACCCTCCTTGTCCTGAATCTTCTGCTTCACGTT 166613 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | ||||||||||| || || |||| |||||||| ||||| || || ||||| || Sbjct 166612 CTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTGAC 166553 Query 43172 AAAGATTTGCAt 43183 ||||| ||||| Sbjct 166552 GAAGATCTGCAT 166541 >seq1357 Length=817 Score = 104 bits (114), Expect = 3e-17 Identities = 140/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || || ||||| || || || || || |||| || |||||||| || ||||| Sbjct 387 TCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAG 328 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 ||||| ||||||||||||| || | | |||||||||| ||| || || || | || Sbjct 327 ATGAGACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTC 268 Query 43113 GCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 43169 | | ||||| |||| || || |||| ||||| || || || || || ||||| Sbjct 267 TCGATGGTGTCGGAGCTC---TCGACCTCGAGGGTGATCGTCTTACCGGTCAGAGTCTTG 211 Query 43170 ACAAAGATTTGCAt 43183 || ||||| ||||| Sbjct 210 ACGAAGATCTGCAT 197 Score = 102 bits (112), Expect = 9e-17 Identities = 118/159 (74%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || |||| || |||||||| || ||||| Sbjct 160 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAA 101 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||||| || | | |||||||||| ||| || || || | | Sbjct 100 GATGAGACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 41 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGT 43150 | | | |||||||| || || || |||| |||||||| Sbjct 40 CTCGATGGTGTCGCTGGACTCAACCTCGAGGGTGATGGT 2 >seq1356 Length=778 Score = 104 bits (114), Expect = 3e-17 Identities = 140/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || || ||||| || || || || || |||| || |||||||| || ||||| Sbjct 407 TCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAG 348 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 ||||| ||||||||||||| || | | |||||||||| ||| || || || | || Sbjct 347 ATGAGACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTC 288 Query 43113 GCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 43169 | | ||||| |||| || || |||| ||||| || || || || || ||||| Sbjct 287 TCGATGGTGTCGGAGCTC---TCGACCTCGAGGGTGATCGTCTTACCGGTCAGAGTCTTG 231 Query 43170 ACAAAGATTTGCAt 43183 || ||||| ||||| Sbjct 230 ACGAAGATCTGCAT 217 >seq513 Length=350598 Score = 82.4 bits (90), Expect = 9e-11 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 42987 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 43046 ||||||||| ||| || ||||| || | || || | |||| || |||||||| ||| Sbjct 19521 GTGCTCTCCGGTTGGATGTTGTAGTCGCCGAGCGTGCAGCCGTCCTCGAGCTGCTTGCCA 19462 Query 43047 GCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCC 43091 ||||| |||| ||||||||||||| ||| | || |||| ||||| Sbjct 19461 GCGAAGATGATGCGCTGCTGGTCGGGCGGGATGCCCTCCATGTCC 19417 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571806728317880