Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20castellanii_20[genbank_20GCA_5F000193105.1_202011-03- 22] 1,521 sequences; 46,714,639 total letters Query= NC_002794.1 Length=195859 Score E Sequences producing significant alignments: (Bits) Value seq990 82.4 1e-10 >seq990 Length=1179915 Score = 82.4 bits (90), Expect = 1e-10 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 94332 CGTCGAGTAACACAGGTTGTGCGCCATGATGATGGACGGGTACAGACTGGCGAAGTCGAA 94391 ||| ||||| || |||||||| || || |||||||||||||||| |||||| |||| Sbjct 553022 CGTGGAGTAGCAGAGGTTGTGGGCAATCATGATGGACGGGTACAACGAGGCGAAATCGAG 552963 Query 94392 CACGGCCACGGGCGCGTGGTGATAGCCCACCGTGGGCTCGAACACGGTGGCGCCCTGGTA 94451 ||| | |||| ||| || ||| || | |||| ||| |||| ||||||||| ||| Sbjct 552962 GGTGGCGATGGGCACGTCGTAGTAGGCCGTCTTGGGGGCGATCACGATGGCGCCCTTGTA 552903 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 626608886372040