Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20castellanii_20[genbank_20GCA_5F000193105.1_202011-03- 22] 1,521 sequences; 46,714,639 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq932 125 7e-24 seq414 116 4e-21 seq42 109 5e-19 seq1445 107 2e-18 seq1307 107 2e-18 seq1223 107 2e-18 seq422 107 2e-18 seq623 105 7e-18 seq447 105 7e-18 seq638 104 2e-17 seq1225 98.7 1e-15 seq1224 95.1 1e-14 >seq932 Length=1165899 Score = 125 bits (138), Expect = 7e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 |||||| || | ||| | || | ||| | ||| ||||| || || ||||| || ||| Sbjct 390356 GCCGCCGCGCAGACGGAGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGC 390415 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 || |||| ||| |||||||| || || || |||| || || |||||||||||||| Sbjct 390416 CAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGATCGGGAGG 390475 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 ||||| || ||||| || || || || | | || | |||||| ||| ||| || Sbjct 390476 GATGCCCTCCTTGTCCTGAATCTTCTGCTTCACGTTCTCGATCGTGTCGCTGGACTCGAC 390535 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||| | ||| | ||||||||||||| ||| || ||||| || |||||| Sbjct 390536 CTCGAGGGTGATAGTCTTGCCGGTCAGCGTCTTGACGAAGATCTGCATA 390584 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 ||||| || | ||| | ||| | ||||| || ||||| || || ||||| || ||| | Sbjct 390585 CCGCCGCGCAGACGAAGAACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCC 390644 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | |||||||||||| || || || |||| ||||| ||||| || || || Sbjct 390645 AGGGTACGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGCGGG 390704 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 ||||| || ||||| ||| || || || | | ||| | ||||| | | ||| ||| Sbjct 390705 ATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTTTCGATCGTGTCCGAGCTCTCGACC 390764 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | ||| | ||||||||||||| ||| || ||||| || |||||| Sbjct 390765 TCGAGGGTGATAGTCTTGCCGGTCAGCGTCTTGACGAAGATCTGCATA 390812 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 ||||| || | ||| | ||| | ||||| || ||||| || || ||||| || ||| | Sbjct 390813 CCGCCGCGCAGACGAAGAACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCC 390872 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | |||||||||||| || || || |||| ||||| ||||| || || || Sbjct 390873 AGGGTACGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGCGGG 390932 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 ||||| || ||||| ||| || || || | | ||| | ||||||| | ||| ||| Sbjct 390933 ATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTTTCGATCGTGTCGGAGCTCTCGACC 390992 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | ||| | ||||| ||||||| || || ||||| || |||||| Sbjct 390993 TCGAGGGTGATGGTCTTACCGGTCAGAGTCTTGACGAAGATCTGCATA 391040 Score = 111 bits (122), Expect = 2e-19 Identities = 145/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || || || || || ||||| || ||| || |||| ||| |||||||| || ||| Sbjct 391071 GTCGATTCCTTCTGGATGTTGTAGTCGGCCAGAGTGCGGCCGTCCTCGAGCTGCTTGCCA 391130 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 || |||| ||||| ||||| || ||||| |||||||| ||||| || ||||| || Sbjct 391131 GCGAAGATGAGACGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGAATCTTTTGCTTA 391190 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | || | |||||| | | ||| ||||| | ||| | ||||||||||||| || Sbjct 391191 ACGTTCTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTC 391250 Query 139748 TTTACGAATATTTGCATAGCT 139768 || ||||| || ||||| ||| Sbjct 391251 TTCACGAAGATCTGCATTGCT 391271 >seq414 Length=771140 Score = 116 bits (128), Expect = 4e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| || || | ||| | || | ||| | || ||||| || || ||||| || ||| Sbjct 167224 GCCACCGCGCAGACGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGC 167165 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 || || | | ||| |||||||| || || || |||| ||||| |||||||||||||| Sbjct 167164 CAGAGTACGCCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCGGGAGG 167105 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 ||||| || ||||| ||| || || || | | ||| | ||||| | | ||| || Sbjct 167104 GATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTTTCGATCGTGTCCGAGCTCTCGAC 167045 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||| | ||| | ||||||||||||| || || ||||| || |||||| Sbjct 167044 CTCGAGGGTGATGGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCATA 166996 Score = 107 bits (118), Expect = 2e-18 Identities = 164/234 (70%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 |||||| || | ||| | ||| | ||| | || ||||| || || ||||| || ||| Sbjct 166768 GCCGCCGCGCAGACGAAGAACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGC 166709 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | |||| ||| |||||||| || ||||| |||| ||||| |||||||| || || Sbjct 166708 GAGCGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCAGGGGG 166649 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || || || ||||| || || || || | | || | |||||| | | ||| || Sbjct 166648 AATACCCTCCTTGTCCTGAATCTTCTGCTTCACGTTCTCGATGGTGTCGCTCGACTCGAC 166589 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATAGCTTA 139770 ||| | ||| | ||||||||||||| || || ||||| || ||||| || || Sbjct 166588 CTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCATGGCCTA 166535 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || ||||| || || ||||| || ||| | |||| || |||||||| || ||| Sbjct 166965 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCA 166906 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 || |||| ||||| |||||||||||||| || || || ||||| ||| || || || Sbjct 166905 GCGAAGATGAGACGCTGCTGATCGGGAGGAATACCCTCCTTGTCCTGGATCTTCTGCTTC 166846 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | || | || ||| ||| ||| ||||| | || | |||||||||||| | || Sbjct 166845 ACGTTCTCGATGGTATCGCTGGACTCGACCTCGAGAGTAATCGTCTTGCCGGTGAGGGTC 166786 Query 139748 TTTACGAATATTTGCAT 139764 || ||||| || ||||| Sbjct 166785 TTGACGAAGATCTGCAT 166769 >seq42 Length=72740 Score = 109 bits (120), Expect = 5e-19 Identities = 185/266 (70%), Gaps = 9/266 (3%) Strand=Plus/Plus Query 152716 GAGCGACGGTAAATTGCTGGGAATTGGCCGCCGGAAGCGTACGAAAATAGTACATGCCCG 152775 || ||||||| || || | ||||| || || | || |||| ||||||||||| | Sbjct 18721 GATCGACGGTGAACTGGATCGCGTTGGCGGCGGGCCGGGTGCGAAGGTAGTACATGCCGG 18780 Query 152776 TCTTGAGGCCACGTTGCCAGCCGTACATGTGCACCGACGCCATCTTAGCCAAAGTAGGGT 152835 |||||||||| ||||| |||| | ||||| ||| | | |||||| || | || | Sbjct 18781 TCTTGAGGCCCTTGCGCCAGGCGTAGAAGTGCATCGAGGTGAGCTTAGCGAACGAGGGCT 18840 Query 152836 CGGCCATGTACACGTTAAACGATTGACTTTGATCAATAAATGCGCCTCTATCTGCTGCCA 152895 || ||||||| ||||| | ||| || || || || || | || | ||| || |||| Sbjct 18841 CGCCCATGTAGACGTTGAGCGACTGGCTCTGGTCGATGTAGGCCGAGCGATCGGCGGCCA 18900 Query 152896 TGTCGATCATGAATTTTCCGTTGTTGTGCCAGCATTCCCAGATTGTCATGTACAGCTTTT 152955 ||||||| |||| || | || | ||| ||||| | ||| |||||||||| | Sbjct 18901 TGTCGATGATGA------CG-CGCTGCGGGAGC--TCCCACACGGTCTTGTACAGCTTCT 18951 Query 152956 TAATGTTGTCGGGAATTTCATCTATG 152981 | |||| |||||| || || || ||| Sbjct 18952 TGATGTCGTCGGGGATCTCCTCGATG 18977 >seq1445 Length=562458 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 ||||| || | ||| | || | ||||| || ||||| || || ||||| || ||| Sbjct 27946 CCGCCACGAAGACGGAGGACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCG 27887 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||| || ||||| |||||||| |||| ||||| |||||||| || || Sbjct 27886 AGGGTGCGACCGTCCTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGATCAGGGGGA 27827 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || || || ||||| || ||||| || | | || | |||||| | | ||| ||| Sbjct 27826 ATACCCTCCTTGTCCTGAATCTTTTGCTTCACGTTCTCGATGGTGTCGCTCGACTCGACC 27767 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | ||| | ||||||||||||| || || ||||| || ||||| Sbjct 27766 TCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 27720 Score = 105 bits (116), Expect = 7e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 ||||| || | ||| | || | ||| | ||| ||||| || || ||||| || ||| | Sbjct 28174 CCGCCACGAAGACGGAGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCC 28115 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||| |||||||| || || || |||| ||||| |||||||| || || Sbjct 28114 AGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCAGGGGGG 28055 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || || || ||||| ||| || || || | | || | ||||||| | ||| ||| Sbjct 28054 ATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCAATCGTGTCGGACGACTCGACC 27995 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | || | |||||||||||| | || || ||||| || |||||| Sbjct 27994 TCGAGAGTAATCGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATA 27947 >seq1307 Length=263854 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 ||||| || | ||| | || | ||||| |||||||| || || ||||| || ||| Sbjct 170553 CCGCCACGAAGACGGAGGACGAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCG 170612 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||| || ||||| |||||||| |||| ||||| |||||||| || || Sbjct 170613 AGGGTGCGACCGTCCTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGATCAGGGGGA 170672 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || || || ||||| || || || || | | || | |||||| ||| ||| ||| Sbjct 170673 ATACCCTCCTTGTCCTGAATCTTCTGCTTCACGTTCTCGATGGTGTCGCTGGACTCGACC 170732 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | ||| | ||||||||||| | || || ||||| || ||||| Sbjct 170733 TCGAGGGTGATGGTCTTGCCGGTTAGGGTCTTGACGAAGATCTGCAT 170779 Score = 100 bits (110), Expect = 3e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || ||||| || || ||||| || ||| || || | ||| |||||||| || || Sbjct 170355 GTGGACTCCTTCTGGATGTTGTAGTCGGCCAGAGTACGGCCGTCCTCGAGCTGCTTGCCG 170414 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 || |||| ||||| |||||||||||||| ||||| || ||||| ||| || || || Sbjct 170415 GCGAAGATGAGACGCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTC 170474 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | ||| | ||||| | | ||| ||||| | ||| | |||||| || || | || Sbjct 170475 ACGTTTTCGATGGTGTCCGACGACTCGACCTCGAGGGTGATCGTCTTACCCGTGAGGGTC 170534 Query 139748 TTTACGAATATTTGCATA 139765 || ||||| || |||||| Sbjct 170535 TTGACGAAGATCTGCATA 170552 >seq1223 Length=762 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 ||||| || | ||| | || | ||||| || ||||| || || ||||| || ||| Sbjct 495 CCGCCACGAAGACGGAGGACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCG 554 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||| || ||||| |||||||| |||| ||||| |||||||| || || Sbjct 555 AGGGTGCGACCGTCCTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGATCAGGGGGA 614 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || || || ||||| || ||||| || | | || | |||||| | | ||| ||| Sbjct 615 ATACCCTCCTTGTCCTGAATCTTTTGCTTCACGTTCTCGATGGTGTCGCTCGACTCGACC 674 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | ||| | ||||||||||||| || || ||||| || ||||| Sbjct 675 TCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 721 Score = 105 bits (116), Expect = 7e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 ||||| || | ||| | || | ||| | ||| ||||| || || ||||| || ||| | Sbjct 267 CCGCCACGAAGACGGAGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCC 326 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||| |||||||| || || || |||| ||||| |||||||| || || Sbjct 327 AGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCAGGGGGG 386 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || || || ||||| ||| || || || | | || | ||||||| | ||| ||| Sbjct 387 ATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCAATCGTGTCGGACGACTCGACC 446 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | || | |||||||||||| | || || ||||| || |||||| Sbjct 447 TCGAGAGTAATCGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATA 494 >seq422 Length=916903 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| || || | ||| | || | ||| | ||| ||||| || || ||||| || || Sbjct 624997 GCCACCACGGAGACGGAGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCAGC 624938 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 || || | ||| |||||||| || || || |||| || || ||||| |||||||| Sbjct 624937 CAGGGTACGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCGGGAGG 624878 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || || |||||||| || || || || | | || | |||||| ||| ||| || Sbjct 624877 AATACCCTCTTTGTCCTGAATCTTCTGCTTGACGTTCTCGATCGTGTCGCTGGACTCTAC 624818 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||| | ||| | ||||||||||||| ||| || ||||| || |||||| Sbjct 624817 CTCGAGGGTGATAGTCTTGCCGGTCAGCGTCTTGACGAAGATCTGCATA 624769 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| | ||| | ||| | || ||||| || || ||||| || ||| Sbjct 624768 CCACCACGGAGACGAAGAACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCG 624709 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||| |||||||| || ||||| |||| ||||| ||||| || || || Sbjct 624708 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCAGGGGGG 624649 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || || || ||||| ||| || || || | | ||| | ||||| | | ||| ||| Sbjct 624648 ATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTTTCGATGGTGTCCGAGCTCTCGACC 624589 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | ||| | ||||||||||||| || || ||||| || |||||| Sbjct 624588 TCGAGGGTGATGGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCATA 624541 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || ||||| || || ||||| || ||| | |||| ||| |||||||| || || Sbjct 624510 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCG 624451 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 || |||| ||||| |||||||||||||| || || || ||||| || || || || Sbjct 624450 GCGAAGATGAGACGCTGCTGATCGGGAGGAATACCCTCCTTGTCCTGAATCTTCTGCTTG 624391 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | || | |||||| | | ||| ||||| | ||| | ||||||||||||| || Sbjct 624390 ACGTTCTCGATCGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTC 624331 Query 139748 TTTACGAATATTTGCAT 139764 || ||||| || ||||| Sbjct 624330 TTCACGAAGATCTGCAT 624314 >seq623 Length=316623 Score = 105 bits (116), Expect = 7e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 139550 CGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAG 139609 |||| || | ||| | || ||||| || || ||||| || ||| || || | | Sbjct 68351 CGCAGGACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCG 68410 Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 || |||||||| || ||||| |||| ||||| ||||| |||||||| ||||| || ||| Sbjct 68411 TCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTG 68470 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729 || ||| || || || | | ||| | ||||| | | ||| ||||| | ||| | Sbjct 68471 TCCTGGATCTTCTGCTTCACGTTTTCGATGGTGTCCGAGCTCTCGACCTCGAGGGTGATG 68530 Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||||||||||| | || || ||||| || |||||| Sbjct 68531 GTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCATA 68566 >seq447 Length=587387 Score = 105 bits (116), Expect = 7e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || ||||| || || ||||| || ||| | |||| ||| |||||||| || || Sbjct 241279 GTGGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCG 241220 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 || |||| || || ||||| |||||||| || || || ||||| || ||||| || Sbjct 241219 GCGAAGATAAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTGAATCTTTTGCTTG 241160 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | || | |||||| ||| ||| ||||| | ||| | ||||||||||||| ||| Sbjct 241159 ACGTTCTCGATCGTGTCGCTGGACTCGACCTCGAGGGTGATAGTCTTGCCGGTCAGCGTC 241100 Query 139748 TTTACGAATATTTGCATA 139765 || ||||| || |||||| Sbjct 241099 TTGACGAAGATCTGCATA 241082 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 ||||| || | ||| | ||| | ||| | || ||||| || || ||||| || || Sbjct 241081 CCGCCGCGCAGACGAAGAACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCA 241022 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | ||| |||||||| || || || |||| ||||| |||||||| ||||| Sbjct 241021 AGAGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCAGGAGGG 240962 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 ||||| || ||||| || || || || | | || | |||||| | | ||| ||| Sbjct 240961 ATGCCCTCCTTGTCCTGAATCTTCTGCTTCACGTTCTCGATCGTGTCGCTCGACTCGACC 240902 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | ||| | ||||||||||| | || || ||||| || ||||| Sbjct 240901 TCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 240855 >seq638 Length=1393837 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| | || | ||| | ||| ||||| || || ||||| || ||| Sbjct 263027 CCACCACGAAGACGGAGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCG 263086 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||| |||||||| || || || |||| ||||| ||||| |||||||| Sbjct 263087 AGCGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATAAGACGCTGCTGGTCGGGAGGG 263146 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 |||||||| ||||| || || || || | | || | |||||| | | ||| ||| Sbjct 263147 ATGCCTTCCTTGTCCTGAATCTTCTGCTTCACGTTCTCGATGGTGTCGCTCGACTCGACC 263206 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | ||| | ||||||||||| | || || ||||| || ||||| Sbjct 263207 TCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 263253 Score = 86.0 bits (94), Expect = 6e-12 Identities = 142/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 139561 GTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTG 139620 ||| | ||| ||||| || || ||||| || ||| | || | |||||||||||| Sbjct 262822 GTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCGTCTTCGAGCTG 262881 Query 139621 TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTT 139680 || ||||| |||| ||||| ||||| || || || || || || ||||| ||| || Sbjct 262882 CTTGCCAGCGAAGATGAGACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTT 262941 Query 139681 TTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740 || || | | || | || ||| | | ||| ||||| | || | |||||||||||| Sbjct 262942 CTGCTTCACGTTCTCGATGGTATCGCTCGACTCGACCTCGAGAGTAATCGTCTTGCCGGT 263001 Query 139741 CAACGTTTTTACGAATATTTGCATA 139765 | || || || || || |||||| Sbjct 263002 AAGGGTCTTGACAAAGATCTGCATA 263026 >seq1225 Length=780 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || ||||| || || ||||| || ||| | |||| ||| |||||||| || || Sbjct 600 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCG 541 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 || |||| ||||| |||||||||||||| || || || ||||| || || || || Sbjct 540 GCGAAGATGAGACGCTGCTGATCGGGAGGAATACCCTCCTTGTCCTGAATCTTCTGCTTC 481 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | || | |||||| | | ||| ||||| | ||| | ||||||||||||| || Sbjct 480 ACGTTCTCGATCGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTC 421 Query 139748 TTTACGAATATTTGCAT 139764 || ||||| || ||||| Sbjct 420 TTCACGAAGATCTGCAT 404 Score = 82.4 bits (90), Expect = 8e-11 Identities = 108/150 (72%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 139616 AGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTG 139675 ||||| || ||||| |||| ||||| ||||| || || || || || || ||||| | Sbjct 780 AGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGG 721 Query 139676 ATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTG 139735 || || || || | | ||| | ||||| | | ||| ||||| | ||| | |||||| Sbjct 720 ATCTTCTGCTTCACGTTTTCGATGGTGTCCGAGCTCTCGACCTCGAGGGTGATGGTCTTG 661 Query 139736 CCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||||||| || || ||||| || |||||| Sbjct 660 CCGGTCAGAGTCTTGACGAAGATCTGCATA 631 >seq1224 Length=756 Score = 95.1 bits (104), Expect = 1e-14 Identities = 115/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 139609 GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 139668 |||||||||||| || ||||| |||| ||||| ||||| || || || || || || || Sbjct 754 GTCTTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCAGGGGGAATACCCTCCTT 695 Query 139669 GTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCAC 139728 ||| ||| || || || | | || | || ||| ||| ||| ||||| | ||| | Sbjct 694 GTCCTGGATCTTCTGCTTCACGTTCTCAATGGTATCGCTGGACTCGACCTCGAGGGTGAT 635 Query 139729 CGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 |||||||||||| | || || ||||| || |||||| Sbjct 634 CGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATA 598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496054568583200