Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20castellanii_20[genbank_20GCA_5F000193105.1_202011-03- 22] 1,521 sequences; 46,714,639 total letters Query= NC_005261.2 Length=137821 Score E Sequences producing significant alignments: (Bits) Value seq447 111 1e-19 >seq447 Length=587387 Score = 111 bits (122), Expect = 1e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 99549 GGTGAGCGAGGTGTTGAGCAGCAGCACGCCGCGGCGCGCCCAGGCCTCCAGGCAGCCGTG 99608 |||| || || |||||| ||||| |||||||| ||||||| | ||||||||||| Sbjct 290766 GGTGTACGTGGCGTTGAGGAGCAGGACGCCGCGCTGCGCCCACTCGGTGAGGCAGCCGTG 290825 Query 99609 CTGCGGCCGCGGGGTCCCGGGGAAGTTCTTCTGCACGGCCGCGTAGATGTTCTGGAGGCT 99668 | || ||| | ||||||| | | || | | |||||||| |||| |||| Sbjct 290826 GTTGGGGCGCCGCCAGCCGGGGATGCTGCGCTCGAGCTCGGCGTAGATCTTCTTGAGGGA 290885 Query 99669 GGGCGGGATCGGAACGCCGCGGTTCACGCTGAAGGCCAGGCCGTGGGCCTGCCCGTGGCT 99728 |||||| | || ||||| ||| |||| ||||| |||||||||||||| | | | Sbjct 290886 GGGCGGCACCGCCACGCCCCGGGTCACCGAGAAGGAGAGGCCGTGGGCCTGGTTCTCGTT 290945 Query 99729 GTGGTAGGGGTCCTGGCCCAGGATGACGACCTTGAC 99764 | ||| |||||||| |||||||| || ||||| || Sbjct 290946 GAAGTACGGGTCCTGACCCAGGATCACCACCTTCAC 290981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440890817403960