Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20castellanii_20[genbank_20GCA_5F000193105.1_202011-03- 22] 1,521 sequences; 46,714,639 total letters Query= NC_005946.1 Length=105903 Score E Sequences producing significant alignments: (Bits) Value seq693 86.0 4e-12 >seq693 Length=557339 Score = 86.0 bits (94), Expect = 4e-12 Identities = 114/152 (75%), Gaps = 6/152 (4%) Strand=Plus/Minus Query 71418 GGTCATCCTGGAGGGAAAGGCGTGGGGGTTGATGATGAGGTCGGGCACCACCCCGTCCTT 71477 |||||| | ||||| |||||||| ||||||||||||| ||||||| || || || Sbjct 273164 GGTCATACGCGAGGGGAAGGCGTGCGGGTTGATGATGACGTCGGGCGACATGCCCGACTC 273105 Query 71478 GTCGAAGGGCATGTCCTCCTGGGTCAGGACAGCTCCG-CATGTC-CCCTTTTGCGCCGTG 71535 | ||||||||||| |||||| | | |||||| | |||| | ||||| ||| ||||| Sbjct 273104 GCTGAAGGGCATGTTCTCCTGCGGC--CACAGCTGGGACATGACGCCCTTCTGC-CCGTG 273048 Query 71536 AAT-GACGCAAACTTGTCGCCCATCTCTGGGT 71566 | || || |||||||| || ||| | |||| Sbjct 273047 CCTCGATGCGAACTTGTCTCCGATCACCGGGT 273016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338758520253384