Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20castellanii_20[genbank_20GCA_5F000193105.1_202011-03- 22] 1,521 sequences; 46,714,639 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq719 89.7 6e-13 >seq719 Length=131621 Score = 89.7 bits (98), Expect = 6e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 15401 TTTATGGGACCGACGTACTATCACCGACTCAAACACATGGTAAAGGACAAGATGCACGCG 15460 || || ||||| || ||||| || | || || |||||||| | |||||||| ||| || Sbjct 36075 TTCATCGGACCCACCTACTACCAGAGGCTGAAGCACATGGTGGACGACAAGATCCACTCG 36016 Query 15461 CGATCGCACGGACAGGTGACGACGCTCCATCGCCAGCCCAACTGCGGTCGATCGCAAGGC 15520 || | | ||| | |||| || ||| | |||||| || ||||||| | | Sbjct 36015 CGCGCTCGCGGCCCGGTGCAGATTCTCACGAGGCAGCCCGTGGAGGGCCGATCGCGCGAC 35956 Query 15521 GGTGGCCTCCGCTTTGGAGAGATGGAAAAGGACTGCATTCTGGTGCACGGCGCCACCCAA 15580 ||||| ||| | || ||||||||||| |||||||| | |||||||| |||| Sbjct 35955 GGTGGTCTCAGGTTCGGAGAGATGGAGCGCGACTGCATGATCTCCCACGGCGCGGCCCAG 35896 Query 15581 TTCCTCAACGAGCG 15594 |||||||| ||||| Sbjct 35895 TTCCTCAAGGAGCG 35882 Score = 89.7 bits (98), Expect = 6e-13 Identities = 113/153 (74%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 15047 ACGCCCGAGATTGGCGACAAGTTTTGCTCTGGT-ATGGCGCAAAAGGGCACGTGCGGCAT 15105 |||||| |||| ||||||||||| | || | ||||| |||||||| ||| ||||| Sbjct 36624 ACGCCCCAGATCGGCGACAAGTTCAGTTCGCGCCATGGC-CAAAAGGGTACGGTGGGCAT 36566 Query 15106 GATTTTCCCCCAGGAAGACATGCCCTTTACCGCGTCAGGCATGACGCCCGACATTATCAT 15165 || | || ||||| ||||||||||| | | |||||| || |||||||| ||| | Sbjct 36565 CATGTACCGGCAGGAGGACATGCCCTTCAACATCGAAGGCATCACCCCCGACATCATCGT 36506 Query 15166 CAACCCCAACTGCATCCCGTCCCGCATGACCAT 15198 |||||| || ||| || || || ||||| || Sbjct 36505 CAACCCGCACGCCATTCCCTCGCGTATGACTAT 36473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611380375909600