Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20castellanii_20[genbank_20GCA_5F000193105.1_202011-03- 22] 1,521 sequences; 46,714,639 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq1357 131 1e-25 seq1356 131 1e-25 seq422 131 1e-25 seq447 127 2e-24 seq414 125 6e-24 seq638 114 1e-20 seq1445 113 4e-20 seq1307 113 4e-20 seq1225 113 4e-20 seq1223 113 4e-20 seq932 113 4e-20 seq623 105 6e-18 seq1224 104 2e-17 >seq1357 Length=817 Score = 131 bits (144), Expect = 1e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||| | |||||||| ||| |||| || || || || | | || Sbjct 197 ATGCAGATCTTCGTCAAGACTCTGACCGGTAAGACGATCACCCTCGAGGTCGAGAGCTCC 256 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | | || || || || || ||||||||||||||||| ||||| || Sbjct 257 GACACCATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGTATTCCCCCCGACCAG 316 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || |||||||| ||| | ||||| ||| ||| || |||| |||||| Sbjct 317 CAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACCCTCGCCGACTACAAC 376 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || ||||| || Sbjct 377 ATCCAGAAGGAATCGAC 393 Score = 95.1 bits (104), Expect = 1e-14 Identities = 117/160 (73%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 22256 TCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACA 22315 |||| || || || || ||| ||| ||| | || | | || || || || || |||| Sbjct 6 TCACCCTCGAGGTTGAGTCCAGCGACACCATCGAGAACGTGAAGCAGAAGATCCAGGACA 65 Query 22316 AGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATC 22375 ||||||||||||| ||||| || || ||||| || || |||||||| ||| | ||||| Sbjct 66 AGGAGGGTATTCCCCCCGACCAGCAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACG 125 Query 22376 ACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415 ||||| || |||| |||||||| || || || || || Sbjct 126 GTCGCACGCTCGCCGACTACAACATCCAGAAGGAGTCGAC 165 >seq1356 Length=778 Score = 131 bits (144), Expect = 1e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||| | |||||||| ||| |||| || || || || | | || Sbjct 217 ATGCAGATCTTCGTCAAGACTCTGACCGGTAAGACGATCACCCTCGAGGTCGAGAGCTCC 276 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | | || || || || || ||||||||||||||||| ||||| || Sbjct 277 GACACCATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGTATTCCCCCCGACCAG 336 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || |||||||| ||| | ||||| ||| ||| || |||| |||||| Sbjct 337 CAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACCCTCGCCGACTACAAC 396 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || ||||| || Sbjct 397 ATCCAGAAGGAATCGAC 413 Score = 87.8 bits (96), Expect = 2e-12 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || |||| || || || || | | |||| ||| | || | | || || Sbjct 13 ACTGGCAAGACCATCACCCTCGAGGTCGAGAGCTCCGACACCATCGAGAACGTGAAGCAG 72 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||| || || || ||||| || ||||| || || |||||||| Sbjct 73 AAGATCCAGGACAAGGAGGGCATCCCTCCTGATCAGCAGCGTCTCATCTTCGCCGGCAAG 132 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415 ||| | ||||| ||||| || |||| |||||||| || || || || || Sbjct 133 CAGCTCGAGGACGGTCGCACGCTCGCCGACTACAACATCCAGAAGGAGTCGAC 185 >seq422 Length=916903 Score = 131 bits (144), Expect = 1e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||| | |||||||| ||| |||| || || || || | | || Sbjct 210670 ATGCAGATCTTCGTCAAGACTCTGACCGGTAAGACGATCACCCTCGAGGTCGAGAGCTCC 210611 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | | || || || || || ||||||||||||||||| ||||| || Sbjct 210610 GACACCATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGTATTCCCCCCGACCAG 210551 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || |||||||| ||| | ||||| ||| ||| || |||| |||||| Sbjct 210550 CAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACCCTCGCCGACTACAAC 210491 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || ||||| || Sbjct 210490 ATCCAGAAGGAATCGAC 210474 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || || |||| || || || || | | | Sbjct 624314 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTCGAGTCGAGC 624373 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | |||| || || ||||| ||||||||||||||||| |||||||| Sbjct 624374 GACACGATCGAGAACGTCAAGCAGAAGATTCAGGACAAGGAGGGTATTCCTCCCGATCAG 624433 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || |||||||| ||| | ||||| |||||| || |||| |||||| Sbjct 624434 CAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTCGCCGACTACAAC 624493 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || || || Sbjct 624494 ATCCAGAAGGAGTCGAC 624510 Score = 109 bits (120), Expect = 5e-19 Identities = 144/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || |||||||| || || || || | || || || || |||| || || || || || Sbjct 210901 AACATGCAAATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTTGAGTCC 210842 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | ||| ||| | || | | || || || || || ||||||||||||||||| ||||| Sbjct 210841 AGCGACACCATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGTATTCCCCCCGAC 210782 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || || ||||| || || |||||||| ||| | ||||| ||||| || |||| ||| Sbjct 210781 CAGCAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACGCTCGCCGACTAC 210722 Query 22396 AACATTCAAAAAGAATCCAC 22415 ||||| || || || || || Sbjct 210721 AACATCCAGAAGGAGTCGAC 210702 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||| | ||||| || || |||| || || || || | | | Sbjct 624542 ATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACCATCACCCTCGAGGTCGAGAGCTCG 624601 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | | || || || || || |||||||||||||| || || || || Sbjct 624602 GACACCATCGAAAACGTGAAGCAGAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAG 624661 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || ||||| ||| | ||||| |||||| || |||| |||||| Sbjct 624662 CAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGCACGCTCGCCGACTACAAC 624721 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || || || Sbjct 624722 ATCCAGAAGGAGTCGAC 624738 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || || |||| || || || || ||| | Sbjct 624770 ATGCAGATCTTCGTCAAGACGCTGACCGGCAAGACTATCACCCTCGAGGTAGAGTCCAGC 624829 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | |||| || || ||||| ||||| ||||||||||| ||||| || Sbjct 624830 GACACGATCGAGAACGTCAAGCAGAAGATTCAGGACAAAGAGGGTATTCCTCCCGACCAG 624889 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || ||||| || ||| | ||||| ||| ||| | | || |||||| Sbjct 624890 CAGCGCCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGTACCCTGGCTGACTACAAC 624949 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || ||||| Sbjct 624950 ATCCAGAAGGAGTCCAC 624966 >seq447 Length=587387 Score = 127 bits (140), Expect = 2e-24 Identities = 147/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || || |||| || || || || ||| | Sbjct 241083 ATGCAGATCTTCGTCAAGACGCTGACCGGCAAGACTATCACCCTCGAGGTCGAGTCCAGC 241142 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | |||| ||||| ||||| ||||||||||||||||| ||||| || Sbjct 241143 GACACGATCGAGAACGTCAAGCAAAAGATTCAGGACAAGGAGGGTATTCCTCCCGACCAG 241202 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || ||||| || |||||||| ||| | ||||| |||||| || |||| |||||| Sbjct 241203 CAGCGCCTTATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTCGCCGACTACAAC 241262 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || |||||| Sbjct 241263 ATCCAGAAGGAGTCCACC 241280 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || || |||| || || || || | | | Sbjct 240855 ATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCGAGC 240914 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | | || || || ||||| ||||||||||| || || || ||||| Sbjct 240915 GACACGATCGAGAACGTGAAGCAGAAGATTCAGGACAAGGAGGGCATCCCTCCTGATCAG 240974 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || |||||||| ||| | ||||| ||| || | | || |||||| Sbjct 240975 CAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACTCTTGCTGACTACAAC 241034 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || |||||| | || | ||| | || ||||||| ||| Sbjct 241035 ATCCAGAAGGAGTCCACCCTCCACCTCGTTCTTCGTCTGCGCGGCGGT 241082 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || ||||| ||| |||| || || || || | || Sbjct 241311 ATGCAGATCTTCGTCAAGACCCTCACGGGTAAGACGATCACCCTCGAGGTCGAGTCGTCC 241370 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | | || || || || || |||||||||||||| || || || || Sbjct 241371 GACACGATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAG 241430 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || ||||| ||| | ||||| ||| || | |||| |||||| Sbjct 241431 CAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGTACTCTGGCCGACTACAAC 241490 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || |||||| Sbjct 241491 ATCCAGAAGGAGTCCACC 241508 >seq414 Length=771140 Score = 125 bits (138), Expect = 6e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || ||| | ||||| || || || ||| | Sbjct 166769 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACGATTACTCTCGAGGTCGAGTCCAGC 166828 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | || | | || || || || || ||||||||||||||||| |||||||| Sbjct 166829 GATACCATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGTATTCCTCCCGATCAG 166888 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || ||||| ||| | |||||| |||||| || |||| |||||| Sbjct 166889 CAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTACAAC 166948 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || || || Sbjct 166949 ATCCAGAAGGAGTCGAC 166965 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || || |||| || || || || | | | Sbjct 166541 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTCGAGTCGAGC 166600 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | | || || || ||||| ||||||||||||||||| || ||||| Sbjct 166601 GACACCATCGAGAACGTGAAGCAGAAGATTCAGGACAAGGAGGGTATTCCCCCTGATCAG 166660 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || ||||| ||| | ||||| |||||| || |||| |||||| Sbjct 166661 CAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGCACGCTCGCCGACTACAAC 166720 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || || || || | || | ||| | || ||||||| || Sbjct 166721 ATCCAGAAGGAGTCGACTCTCCACCTCGTTCTTCGTCTGCGCGGCGG 166767 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||| | ||||| || || |||| || || || || | | | Sbjct 166997 ATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACCATCACCCTCGAGGTCGAGAGCTCG 167056 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | | || || || || || ||||||||||| || || |||||||| Sbjct 167057 GACACGATCGAAAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCTCCCGATCAG 167116 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || |||||||| ||| | ||||| || || | |||| |||||| Sbjct 167117 CAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGGCGTACTCTGGCCGACTACAAC 167176 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || || || Sbjct 167177 ATCCAGAAGGAGTCGAC 167193 >seq638 Length=1393837 Score = 114 bits (126), Expect = 1e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | |||||||| ||| |||| || || || || | | | Sbjct 262797 ATGCAGATCTTCGTCAAGACGCTGACCGGTAAGACGATCACCCTCGAGGTCGAGAGCTCG 262738 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | || || || || || ||||||||||| || || ||||| || Sbjct 262737 GACACGATCGAGAATGTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAG 262678 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || |||||||| ||| | ||||| ||||||| || |||| |||||| Sbjct 262677 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCGCCGACTACAAC 262618 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || |||||| Sbjct 262617 ATCCAGAAGGAGTCCACC 262600 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | ||||| || ||| | ||||| || || || | | | Sbjct 263025 ATGCAGATCTTTGTCAAGACCCTTACCGGCAAGACGATTACTCTCGAGGTCGAGTCGAGC 262966 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | || | | || || || || || |||||||||||||| || || || || Sbjct 262965 GATACCATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAG 262906 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || ||||| ||| | || || ||| || || |||| |||||| Sbjct 262905 CAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAAGACGGCCGTACGCTCGCCGACTACAAC 262846 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || ||||| Sbjct 262845 ATCCAGAAGGAGTCCAC 262829 >seq1445 Length=562458 Score = 113 bits (124), Expect = 4e-20 Identities = 144/197 (73%), Gaps = 1/197 (1%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | | | ||||| || |||| || || || || ||| | Sbjct 28176 ATGCAGATCTTCGTCAAGACCTCA-CGGGTAAGACCATCACCCTCGAGGTCGAGTCCAGC 28234 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | | || || || || || ||||||||||||||||| || ||||| Sbjct 28235 GACACCATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGTATTCCCCCTGATCAG 28294 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || ||||| || |||||||| ||| | ||||| ||||||| | |||| |||||| Sbjct 28295 CAGCGCCTTATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTGGCCGACTACAAC 28354 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || ||||| Sbjct 28355 ATCCAGAAGGAGTCCAC 28371 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || || |||| || || || || | | | Sbjct 27720 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTCGAGTCGAGC 27779 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | | || ||||| ||||| ||||||||||||||||| || ||||| Sbjct 27780 GACACCATCGAGAACGTGAAGCAAAAGATTCAGGACAAGGAGGGTATTCCCCCTGATCAG 27839 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || || || ||| | ||||| |||||| || |||| |||||| Sbjct 27840 CAGCGTCTCATCTTCGCTGGTAAGCAGCTTGAGGACGGTCGCACCCTCGCCGACTACAAC 27899 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || || || Sbjct 27900 ATCCAGAAGGAGTCGAC 27916 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || ||| | ||||| || || || | || Sbjct 27948 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACGATTACTCTCGAGGTCGAGTCGTCC 28007 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | | || || || || || |||||||||||||| || || ||||| Sbjct 28008 GACACGATTGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGTATCCCCCCTGATCAG 28067 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || |||||||| ||| | ||||| |||||| | |||| |||||| Sbjct 28068 CAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACTCTGGCCGACTACAAC 28127 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || ||||| Sbjct 28128 ATCCAGAAGGAGTCCAC 28144 >seq1307 Length=263854 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || ||||||| || || |||| || || || || ||| | Sbjct 170779 ATGCAGATCTTCGTCAAGACCCTAACCGGCAAGACCATCACCCTCGAGGTCGAGTCCAGC 170720 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | | || || || ||||| ||||||||||||||||| || ||||| Sbjct 170719 GACACCATCGAGAACGTGAAGCAGAAGATTCAGGACAAGGAGGGTATTCCCCCTGATCAG 170660 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || || || ||| | ||||| |||||| || |||| |||||| Sbjct 170659 CAGCGTCTCATCTTCGCTGGTAAGCAGCTTGAGGACGGTCGCACCCTCGCCGACTACAAC 170600 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || || || Sbjct 170599 ATCCAGAAGGAGTCTAC 170583 Score = 100 bits (110), Expect = 2e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || ||||| ||| |||| || || || || | | Sbjct 170551 ATGCAGATCTTCGTCAAGACCCTCACGGGTAAGACGATCACCCTCGAGGTCGAGTCGTCG 170492 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | | || || || || || ||||||||||| || || |||||||| Sbjct 170491 GACACCATCGAAAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCTCCCGATCAG 170432 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || |||||||| ||| | ||||| ||| || | |||| |||||| Sbjct 170431 CAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACTCTGGCCGACTACAAC 170372 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || |||||| Sbjct 170371 ATCCAGAAGGAGTCCACC 170354 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || || |||| || || || || | || Sbjct 170323 ATGCAGATCTTCGTCAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTCGAGTCGTCC 170264 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | | || || || || || |||||||||||||| || || || || Sbjct 170263 GACACGATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAG 170204 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || ||||| ||| | ||||| ||||||| || |||| |||||| Sbjct 170203 CAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGCACCCTCGCCGACTACAAC 170144 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || |||||| Sbjct 170143 ATCCAGAAGGAGTCCACC 170126 >seq1225 Length=780 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || || |||| || || || || | | | Sbjct 404 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTCGAGTCGAGC 463 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | | || || || ||||| ||||||||||||||||| |||||||| Sbjct 464 GACACGATCGAGAACGTGAAGCAGAAGATTCAGGACAAGGAGGGTATTCCTCCCGATCAG 523 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || |||||||| ||| | ||||| |||||| || |||| |||||| Sbjct 524 CAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTCGCCGACTACAAC 583 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || || || Sbjct 584 ATCCAGAAGGAGTCGAC 600 >seq1223 Length=762 Score = 113 bits (124), Expect = 4e-20 Identities = 144/197 (73%), Gaps = 1/197 (1%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | | | ||||| || |||| || || || || ||| | Sbjct 265 ATGCAGATCTTCGTCAAGACCTCA-CGGGTAAGACCATCACCCTCGAGGTCGAGTCCAGC 207 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | | || || || || || ||||||||||||||||| || ||||| Sbjct 206 GACACCATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGTATTCCCCCTGATCAG 147 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || ||||| || |||||||| ||| | ||||| ||||||| | |||| |||||| Sbjct 146 CAGCGCCTTATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTGGCCGACTACAAC 87 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || ||||| Sbjct 86 ATCCAGAAGGAGTCCAC 70 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || || |||| || || || || | | | Sbjct 721 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTCGAGTCGAGC 662 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | | || ||||| ||||| ||||||||||||||||| || ||||| Sbjct 661 GACACCATCGAGAACGTGAAGCAAAAGATTCAGGACAAGGAGGGTATTCCCCCTGATCAG 602 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || || || ||| | ||||| |||||| || |||| |||||| Sbjct 601 CAGCGTCTCATCTTCGCTGGTAAGCAGCTTGAGGACGGTCGCACCCTCGCCGACTACAAC 542 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || || || Sbjct 541 ATCCAGAAGGAGTCGAC 525 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || ||| | ||||| || || || | || Sbjct 493 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACGATTACTCTCGAGGTCGAGTCGTCC 434 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | | || || || || || |||||||||||||| || || ||||| Sbjct 433 GACACGATTGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGTATCCCCCCTGATCAG 374 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || |||||||| ||| | ||||| |||||| | |||| |||||| Sbjct 373 CAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACTCTGGCCGACTACAAC 314 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || ||||| Sbjct 313 ATCCAGAAGGAGTCCAC 297 >seq932 Length=1165899 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || || |||| || || || || ||| | Sbjct 390583 ATGCAGATCTTCGTCAAGACGCTGACCGGCAAGACTATCACCCTCGAGGTCGAGTCCAGC 390524 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | | || || || ||||| ||||||||||| || || |||||||| Sbjct 390523 GACACGATCGAGAACGTGAAGCAGAAGATTCAGGACAAGGAGGGCATCCCTCCCGATCAG 390464 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || ||||| || |||||||| ||| | ||||| ||||||| | |||| |||||| Sbjct 390463 CAGCGCCTTATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTGGCCGACTACAAC 390404 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || ||||| Sbjct 390403 ATCCAGAAGGAGTCCAC 390387 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||| | |||||||| || |||| || || || || | | || Sbjct 391039 ATGCAGATCTTCGTCAAGACTCTGACCGGTAAGACCATCACCCTCGAGGTCGAGAGCTCC 390980 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | | || || || || || ||||||||||| || || || || || Sbjct 390979 GACACGATCGAAAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCGCCTGACCAG 390920 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || |||||||| ||| | || || ||| ||| | |||| |||||| Sbjct 390919 CAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAAGACGGCCGTACCCTGGCCGACTACAAC 390860 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || || || | || | ||| | || ||||||| ||| Sbjct 390859 ATCCAGAAGGAGTCGACTCTTCACCTCGTTCTTCGTCTGCGCGGCGGT 390812 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || || |||| || || || || | | | Sbjct 390811 ATGCAGATCTTCGTCAAGACGCTGACCGGCAAGACTATCACCCTCGAGGTCGAGAGCTCG 390752 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | | || || || || || ||||||||||| || || || || || Sbjct 390751 GACACGATCGAAAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCGCCTGACCAG 390692 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || |||||||| ||| | || || ||| ||| | |||| |||||| Sbjct 390691 CAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAAGACGGCCGTACCCTGGCCGACTACAAC 390632 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || || || | || | ||| | || ||||||| ||| Sbjct 390631 ATCCAGAAGGAGTCGACTCTTCACCTCGTTCTTCGTCTGCGCGGCGGT 390584 >seq623 Length=316623 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || || |||| || || || || | | | Sbjct 68565 ATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGAGCTCG 68506 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | | || || || || || ||||||||||| || || ||||| || Sbjct 68505 GACACCATCGAAAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAG 68446 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || ||||| ||| | ||||| ||| ||| | |||| |||||| Sbjct 68445 CAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGTACCCTGGCCGACTACAAC 68386 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || |||||| | || | || ||||| |||| || ||| Sbjct 68385 ATCCAGAAGGAGTCCACCCTGCACCTTGTCCTGCGACTGCGTGGTGGT 68338 >seq1224 Length=756 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || || |||| || || || || | || Sbjct 371 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTCGAGTCGTCC 430 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | |||| || || || || ||||||||||||||||| ||||| || Sbjct 431 GACACCATCGAGAACGTCAAGCAGAAGATCCAGGACAAGGAGGGTATTCCTCCCGACCAG 490 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || ||||| ||| | ||||| ||| ||| || |||| |||||| Sbjct 491 CAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGTACCCTCGCCGACTACAAC 550 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || || || Sbjct 551 ATCCAGAAGGAGTCGAC 567 Score = 86.0 bits (94), Expect = 5e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || ||| |||| || || || || ||| | Sbjct 599 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACGATCACCCTCGAGGTCGAGTCCAGC 658 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | || | | || || || || || ||||||||||||||||| || || || Sbjct 659 GATACCATTGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGTATTCCCCCTGACCAG 718 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGA 22373 || ||||| || || || ||||| ||| | || || Sbjct 719 CAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAAGA 753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419720219423365