Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20castellanii_20[genbank_20GCA_5F000193105.1_202011-03- 22] 1,521 sequences; 46,714,639 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq932 143 3e-29 seq447 141 1e-28 seq422 140 4e-28 seq1445 136 4e-27 seq1224 136 4e-27 seq1223 136 4e-27 seq1225 132 5e-26 seq1307 131 2e-25 seq638 127 2e-24 seq623 125 8e-24 seq414 125 8e-24 seq1357 104 3e-17 seq1356 104 3e-17 seq376 100 3e-16 >seq932 Length=1165899 Score = 143 bits (158), Expect = 3e-29 Identities = 147/192 (77%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || || ||||| || |||||||| || |||| || |||||||| |||||||| Sbjct 391077 TCCTTCTGGATGTTGTAGTCGGCCAGAGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAG 391136 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 ||||| ||||||||||| | || | || ||||||||| || ||||| || | || Sbjct 391137 ATGAGACGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGAATCTTTTGCTTAACGTTC 391196 Query 42138 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197 | | ||||||||||| || || |||| |||||||| ||||| || || ||||| || Sbjct 391197 TCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACG 391256 Query 42198 AAGATTTGCATT 42209 ||||| |||||| Sbjct 391257 AAGATCTGCATT 391268 Score = 118 bits (130), Expect = 1e-21 Identities = 144/195 (74%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || ||||| || || |||| || |||||||| || ||||| Sbjct 390620 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCTTCGAGCTGCTTGCCGGCGAA 390679 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | || | || |||||||||| ||| || || || | | Sbjct 390680 GATGAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 390739 Query 42137 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | |||||| |||| || || |||| ||||| || ||||| || |||||||| Sbjct 390740 TTCGATCGTGTCCGAGCTC---TCGACCTCGAGGGTGATAGTCTTGCCGGTCAGCGTCTT 390796 Query 42194 TACAAAGATTTGCAT 42208 || ||||| ||||| Sbjct 390797 GACGAAGATCTGCAT 390811 Score = 114 bits (126), Expect = 1e-20 Identities = 143/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || ||||| || || |||| || |||||||| || ||||| Sbjct 390848 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCTTCGAGCTGCTTGCCGGCGAA 390907 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | || | || |||||||||| ||| || || || | | Sbjct 390908 GATGAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 390967 Query 42137 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | |||||| |||| || || |||| |||||||| || || || || ||||| Sbjct 390968 TTCGATCGTGTCGGAGCTC---TCGACCTCGAGGGTGATGGTCTTACCGGTCAGAGTCTT 391024 Query 42194 TACAAAGATTTGCAT 42208 || ||||| ||||| Sbjct 391025 GACGAAGATCTGCAT 391039 >seq447 Length=587387 Score = 141 bits (156), Expect = 1e-28 Identities = 147/193 (76%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| ||||| ||||| || |||| || |||||||| || ||||| Sbjct 241046 CTCCTTCTGGATGTTGTAGTCAGCAAGAGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAA 240987 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| |||||||| || | || | || |||||||||| || || || || | | Sbjct 240986 GATGAGACGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGAATCTTCTGCTTCACGTT 240927 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | |||||||||||| || || |||| |||||||| ||||| || || ||||| || Sbjct 240926 CTCGATCGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCAC 240867 Query 42197 AAAGATTTGCATT 42209 ||||| |||||| Sbjct 240866 GAAGATCTGCATT 240854 Score = 134 bits (148), Expect = 1e-26 Identities = 145/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || || || || |||| || |||||||| || ||||| Sbjct 241274 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 241215 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || || ||||||||||||| || | | |||||||||| || ||||| |||| | Sbjct 241214 GATAAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTGAATCTTTTGCTTGACGTT 241155 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | ||||||||| || || || |||| ||||| || ||||| || |||||||| || Sbjct 241154 CTCGATCGTGTCGCTGGACTCGACCTCGAGGGTGATAGTCTTGCCGGTCAGCGTCTTGAC 241095 Query 42197 AAAGATTTGCAT 42208 ||||| ||||| Sbjct 241094 GAAGATCTGCAT 241083 Score = 134 bits (148), Expect = 1e-26 Identities = 145/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || |||||||| || |||| || |||||||| |||||||| Sbjct 241502 CTCCTTCTGGATGTTGTAGTCGGCCAGAGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAA 241443 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | || | | |||||||||| ||| || || || | | Sbjct 241442 GATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 241383 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | ||||||| ||| || || |||| ||||| || || ||||| || ||||| || Sbjct 241382 CTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTACCCGTGAGGGTCTTGAC 241323 Query 42197 AAAGATTTGCAT 42208 ||||| ||||| Sbjct 241322 GAAGATCTGCAT 241311 >seq422 Length=916903 Score = 140 bits (154), Expect = 4e-28 Identities = 146/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| |||||||| || || |||| || |||||||| || ||||| Sbjct 624961 CTCCTTCTGGATGTTGTAGTCAGCCAGGGTACGGCCGTCCTCGAGCTGCTTTCCGGCGAA 624902 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||||| || | | ||| |||||| || || || |||| | Sbjct 624901 GATGAGGCGCTGCTGGTCGGGAGGAATACCCTCTTTGTCCTGAATCTTCTGCTTGACGTT 624842 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | ||||||||| || || || |||| ||||| || ||||| || |||||||| || Sbjct 624841 CTCGATCGTGTCGCTGGACTCTACCTCGAGGGTGATAGTCTTGCCGGTCAGCGTCTTGAC 624782 Query 42197 AAAGATTTGCAT 42208 ||||| ||||| Sbjct 624781 GAAGATCTGCAT 624770 Score = 138 bits (152), Expect = 1e-27 Identities = 148/196 (76%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || || || || |||| || |||||||| || ||||| Sbjct 210707 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAA 210766 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||||| || | | |||||||||| ||| || || || | | Sbjct 210767 GATGAGACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 210826 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | |||||||| || || || |||| |||||||| ||||| || || ||||| || Sbjct 210827 CTCGATGGTGTCGCTGGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCAC 210886 Query 42197 AAAGATTTGCATTTTC 42212 ||||||||||| ||| Sbjct 210887 GAAGATTTGCATGTTC 210902 Score = 136 bits (150), Expect = 4e-27 Identities = 146/193 (76%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || || || || |||| || |||||||| || ||||| Sbjct 624505 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 624446 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| |||||||| |||| || | | |||||||||| || || || |||| | Sbjct 624445 GATGAGACGCTGCTGATCGGGAGGAATACCCTCCTTGTCCTGAATCTTCTGCTTGACGTT 624386 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | |||||||||||| || || |||| |||||||| ||||| || || ||||| || Sbjct 624385 CTCGATCGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 624326 Query 42197 AAAGATTTGCATT 42209 ||||| |||||| Sbjct 624325 GAAGATCTGCATT 624313 Score = 109 bits (120), Expect = 6e-19 Identities = 142/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || || || || |||| || |||||||| |||||||| Sbjct 624733 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAA 624674 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | || | | |||||||||| ||| || || || | | Sbjct 624673 GATGAGACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 624614 Query 42137 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | ||||| |||| || || |||| |||||||| ||||| || || ||||| Sbjct 624613 TTCGATGGTGTCCGAGCTC---TCGACCTCGAGGGTGATGGTCTTGCCGGTCAGAGTCTT 624557 Query 42194 TACAAAGATTTGCAT 42208 || ||||| ||||| Sbjct 624556 GACGAAGATCTGCAT 624542 Score = 104 bits (114), Expect = 3e-17 Identities = 140/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || || ||||| || || || || || |||| || |||||||| || ||||| Sbjct 210480 TCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAG 210539 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 ||||| ||||||||||||| || | | |||||||||| ||| || || || | || Sbjct 210540 ATGAGACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTC 210599 Query 42138 GCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 42194 | | ||||| |||| || || |||| ||||| || || || || || ||||| Sbjct 210600 TCGATGGTGTCGGAGCTC---TCGACCTCGAGGGTGATCGTCTTACCGGTCAGAGTCTTG 210656 Query 42195 ACAAAGATTTGCAT 42208 || ||||| ||||| Sbjct 210657 ACGAAGATCTGCAT 210670 >seq1445 Length=562458 Score = 136 bits (150), Expect = 4e-27 Identities = 146/193 (76%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || || || || |||| || ||||||||||||||||| Sbjct 27911 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCGTCCTCAAGCTGCTTACCAGCGAA 27852 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| |||||||| || | || | | |||||||||| || ||||| || | | Sbjct 27851 GATGAGACGCTGCTGATCAGGGGGAATACCCTCCTTGTCCTGAATCTTTTGCTTCACGTT 27792 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | ||||||||||| || || |||| |||||||| ||||| || || ||||| || Sbjct 27791 CTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 27732 Query 42197 AAAGATTTGCATT 42209 ||||| |||||| Sbjct 27731 GAAGATCTGCATT 27719 >seq1224 Length=756 Score = 136 bits (150), Expect = 4e-27 Identities = 146/193 (76%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || || || || |||| || |||||||| |||||||| Sbjct 562 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAA 503 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||||| || | | |||||||||| ||| || || |||| | Sbjct 502 GATGAGACGCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTGGATCTTCTGCTTGACGTT 443 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | |||||| ||| || || |||| |||||||| ||||| || || ||||| || Sbjct 442 CTCGATGGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCAC 383 Query 42197 AAAGATTTGCATT 42209 ||||| |||||| Sbjct 382 GAAGATCTGCATT 370 Score = 104 bits (114), Expect = 3e-17 Identities = 117/157 (75%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 42052 CGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCT 42111 |||| || |||||||| |||||||| ||||| ||||||||||| | || | | ||||| Sbjct 755 CGTCTTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCAGGGGGAATACCCTCCT 696 Query 42112 TGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGA 42171 ||||| ||| || || || | || | | || ||||| || || || |||| |||| Sbjct 695 TGTCCTGGATCTTCTGCTTCACGTTCTCAATGGTATCGCTGGACTCGACCTCGAGGGTGA 636 Query 42172 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || ||||| || || ||||| || ||||| ||||| Sbjct 635 TCGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 599 >seq1223 Length=762 Score = 136 bits (150), Expect = 4e-27 Identities = 146/193 (76%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || || || || |||| || ||||||||||||||||| Sbjct 530 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCGTCCTCAAGCTGCTTACCAGCGAA 589 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| |||||||| || | || | | |||||||||| || ||||| || | | Sbjct 590 GATGAGACGCTGCTGATCAGGGGGAATACCCTCCTTGTCCTGAATCTTTTGCTTCACGTT 649 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | ||||||||||| || || |||| |||||||| ||||| || || ||||| || Sbjct 650 CTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 709 Query 42197 AAAGATTTGCATT 42209 ||||| |||||| Sbjct 710 GAAGATCTGCATT 722 >seq1225 Length=780 Score = 132 bits (146), Expect = 5e-26 Identities = 145/193 (75%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || || || || |||| || |||||||| || ||||| Sbjct 595 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 536 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| |||||||| |||| || | | |||||||||| || || || || | | Sbjct 535 GATGAGACGCTGCTGATCGGGAGGAATACCCTCCTTGTCCTGAATCTTCTGCTTCACGTT 476 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | |||||||||||| || || |||| |||||||| ||||| || || ||||| || Sbjct 475 CTCGATCGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 416 Query 42197 AAAGATTTGCATT 42209 ||||| |||||| Sbjct 415 GAAGATCTGCATT 403 Score = 86.0 bits (94), Expect = 7e-12 Identities = 111/152 (73%), Gaps = 6/152 (4%) Strand=Plus/Minus Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 |||||||| |||||||| ||||| ||||||||||| | || | | |||||||||| | Sbjct 780 AGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGG 721 Query 42120 ATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTT 42176 || || || || | | | | ||||| |||| || || |||| |||||||| Sbjct 720 ATCTTCTGCTTCACGTTTTCGATGGTGTCCGAGCTC---TCGACCTCGAGGGTGATGGTC 664 Query 42177 TTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||| || || ||||| || ||||| ||||| Sbjct 663 TTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 632 >seq1307 Length=263854 Score = 131 bits (144), Expect = 2e-25 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || || || || |||| || |||||||| |||||||| Sbjct 170132 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAA 170191 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | || | | |||||||||| ||| || || || | | Sbjct 170192 GATGAGACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 170251 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | ||||||| ||| || || |||| |||||||| ||||| || || ||||| || Sbjct 170252 CTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTGAC 170311 Query 42197 AAAGATTTGCAT 42208 ||||| ||||| Sbjct 170312 GAAGATCTGCAT 170323 Score = 131 bits (144), Expect = 2e-25 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || || || || |||| || ||||||||||||||||| Sbjct 170588 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCGTCCTCAAGCTGCTTACCAGCGAA 170647 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| |||||||| || | || | | |||||||||| || || || || | | Sbjct 170648 GATGAGACGCTGCTGATCAGGGGGAATACCCTCCTTGTCCTGAATCTTCTGCTTCACGTT 170707 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | |||||||| || || || |||| |||||||| ||||| ||||| ||||| || Sbjct 170708 CTCGATGGTGTCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTTAGGGTCTTGAC 170767 Query 42197 AAAGATTTGCAT 42208 ||||| ||||| Sbjct 170768 GAAGATCTGCAT 170779 >seq638 Length=1393837 Score = 127 bits (140), Expect = 2e-24 Identities = 144/193 (75%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || || || || |||| || |||||||| || ||||| Sbjct 263062 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAA 263121 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || || ||||||||||||| || | || ||||||||| || || || || | | Sbjct 263122 GATAAGACGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGAATCTTCTGCTTCACGTT 263181 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | ||||||||||| || || |||| |||||||| ||||| || || ||||| || Sbjct 263182 CTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCAC 263241 Query 42197 AAAGATTTGCATT 42209 ||||| |||||| Sbjct 263242 GAAGATCTGCATT 263254 Score = 125 bits (138), Expect = 8e-24 Identities = 143/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || || || || |||| || |||||||| |||||||| Sbjct 262834 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCGTCTTCGAGCTGCTTGCCAGCGAA 262893 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | || | | |||||||||| ||| || || || | | Sbjct 262894 GATGAGACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 262953 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | || |||||||| || || |||| || || || ||||| || || ||||| || Sbjct 262954 CTCGATGGTATCGCTCGACTCGACCTCGAGAGTAATCGTCTTGCCGGTAAGGGTCTTGAC 263013 Query 42197 AAAGATTTGCAT 42208 |||||| ||||| Sbjct 263014 AAAGATCTGCAT 263025 Score = 114 bits (126), Expect = 1e-20 Identities = 143/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || || || || |||| || |||||||| || ||||| Sbjct 262606 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 262665 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || || ||||||||||||| || | || |||||||||| ||| || || || | | Sbjct 262666 GATCAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACATT 262725 Query 42137 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | | |||||| |||| || || |||| ||||| || || || || |||||||| Sbjct 262726 CTCGATCGTGTCCGAGCTC---TCGACCTCGAGGGTGATCGTCTTACCGGTCAGCGTCTT 262782 Query 42194 TACAAAGATTTGCAT 42208 || ||||| ||||| Sbjct 262783 GACGAAGATCTGCAT 262797 >seq623 Length=316623 Score = 125 bits (138), Expect = 8e-24 Identities = 152/206 (74%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 42006 TGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGC 42065 |||| ||| |||||| || || ||||| || ||||| || || |||| || |||||| Sbjct 68363 TGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGC 68422 Query 42066 TTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTT 42125 || |||||||| ||||| ||||||||||||| || | || |||||||||| ||| || Sbjct 68423 TTGCCAGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTC 68482 Query 42126 TGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCC 42182 || || | | | | ||||| |||| || || |||| |||||||| ||||| Sbjct 68483 TGCTTCACGTTTTCGATGGTGTCCGAGCTC---TCGACCTCGAGGGTGATGGTCTTGCCG 68539 Query 42183 GTTAGCGTCTTTACAAAGATTTGCAT 42208 || || ||||| || ||||| ||||| Sbjct 68540 GTGAGGGTCTTCACGAAGATCTGCAT 68565 >seq414 Length=771140 Score = 125 bits (138), Expect = 8e-24 Identities = 143/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || || || || |||| || |||||||| |||||||| Sbjct 166732 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAA 166673 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| |||||||| || | || | | |||||||||| || || || || | | Sbjct 166672 GATGAGACGCTGCTGATCAGGGGGAATACCCTCCTTGTCCTGAATCTTCTGCTTCACGTT 166613 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | ||||||||||| || || |||| |||||||| ||||| || || ||||| || Sbjct 166612 CTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTGAC 166553 Query 42197 AAAGATTTGCAT 42208 ||||| ||||| Sbjct 166552 GAAGATCTGCAT 166541 >seq1357 Length=817 Score = 104 bits (114), Expect = 3e-17 Identities = 140/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || || ||||| || || || || || |||| || |||||||| || ||||| Sbjct 387 TCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAG 328 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 ||||| ||||||||||||| || | | |||||||||| ||| || || || | || Sbjct 327 ATGAGACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTC 268 Query 42138 GCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 42194 | | ||||| |||| || || |||| ||||| || || || || || ||||| Sbjct 267 TCGATGGTGTCGGAGCTC---TCGACCTCGAGGGTGATCGTCTTACCGGTCAGAGTCTTG 211 Query 42195 ACAAAGATTTGCAT 42208 || ||||| ||||| Sbjct 210 ACGAAGATCTGCAT 197 Score = 102 bits (112), Expect = 9e-17 Identities = 118/159 (74%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || || || || |||| || |||||||| || ||||| Sbjct 160 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAA 101 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||||| || | | |||||||||| ||| || || || | | Sbjct 100 GATGAGACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 41 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGT 42175 | | | |||||||| || || || |||| |||||||| Sbjct 40 CTCGATGGTGTCGCTGGACTCAACCTCGAGGGTGATGGT 2 >seq1356 Length=778 Score = 104 bits (114), Expect = 3e-17 Identities = 140/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || || ||||| || || || || || |||| || |||||||| || ||||| Sbjct 407 TCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAG 348 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 ||||| ||||||||||||| || | | |||||||||| ||| || || || | || Sbjct 347 ATGAGACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTC 288 Query 42138 GCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 42194 | | ||||| |||| || || |||| ||||| || || || || || ||||| Sbjct 287 TCGATGGTGTCGGAGCTC---TCGACCTCGAGGGTGATCGTCTTACCGGTCAGAGTCTTG 231 Query 42195 ACAAAGATTTGCAT 42208 || ||||| ||||| Sbjct 230 ACGAAGATCTGCAT 217 >seq376 Length=602607 Score = 100 bits (110), Expect = 3e-16 Identities = 140/194 (72%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || || ||||| || |||| | || |||| || |||||||| |||||| | Sbjct 283237 TCCTTCTGGATGTTGTAGTCGGCCAATGACCTGCCGTCCTCGAGCTGCTTGCCAGCGCAG 283296 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 ||||| ||||| | || ||||||| ||||||||| | || || || | ||| Sbjct 283297 ATGAGGCGCTGGAGCTCCTTGGGCACGCCCTCCTTGTCGTGCACCTTCTGCTTCACAGTC 283356 Query 42138 GCCACCGTGTCGCTCGAT-TCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | |||||||||| || | ||||| |||| |||||| || |||| || | ||| || Sbjct 283357 TCTACCGTGTCGC-CGCTCTCCACCTCGAGCGTGATCGTCCGCCCCGACAGGGCCTTCAC 283415 Query 42197 AAAGATTTGCATTT 42210 ||||||||||||| Sbjct 283416 GAAGATTTGCATTT 283429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543202472166640