Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20castellanii_20[genbank_20GCA_5F000193105.1_202011-03- 22] 1,521 sequences; 46,714,639 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq932 123 2e-22 seq1365 113 4e-19 seq618 105 5e-17 seq894 104 2e-16 seq638 104 2e-16 seq108 102 7e-16 seq666 100 2e-15 seq496 100 2e-15 seq754 98.7 8e-15 seq1182 96.9 3e-14 seq422 96.9 3e-14 seq40 93.3 3e-13 seq990 91.5 1e-12 seq723 91.5 1e-12 seq521 91.5 1e-12 seq542 89.7 4e-12 seq254 89.7 4e-12 seq628 87.8 1e-11 seq615 87.8 1e-11 seq696 86.0 5e-11 >seq932 Length=1165899 Score = 123 bits (136), Expect = 2e-22 Identities = 219/317 (69%), Gaps = 3/317 (1%) Strand=Plus/Minus Query 1147114 AATGAGTTAATTCCGGAAATTCCTTTTGCCCTCAAACTAAAGATTGCTTATCAAGCTTCC 1147173 |||||| | |||||||| ||||| || || || || ||||| || || |||| || Sbjct 293402 AATGAGCTCATTCCGGACATTCCATTCGCGCTGAAGGCCAAGATGGCGTACCAAGGCTCG 293343 Query 1147174 AAGGGAATGCATTTTCTACATTCGTCTGGTATTGTTCATCGTGATCTCAAGTCACTTAAT 1147233 ||||| ||||| || || || ||||| || || || || || || ||||| || || || Sbjct 293342 AAGGGCATGCACTTCCTGCACTCGTCGGGCATCGTGCACCGCGACCTCAAATCGCTCAAC 293283 Query 1147234 TTGTTGTTGGATTCCAAGTGGAATGTCAAAGTTAGTGATTTTGGTTTGACCAAGTTCAAA 1147293 || || | || ||||||||||| ||||| || || |||||| | ||||||||||| Sbjct 293282 CTGCTGCTCGACTCCAAGTGGAACGTCAAGGTCTCCGACTTTGGTCTCACCAAGTTCAAG 293223 Query 1147294 TCTGATATGGATAAAAACAAATCCGAAAAACAACTTAACTGTAGCATTCATTGGACAGCT 1147353 || ||| | || | || || ||| | | | ||| | || ||||| || Sbjct 293222 GAGGACATGAAGAAGGGCGGCACC-AAGGACA--TCGCCGGCAGCGTCCACTGGACGGCG 293166 Query 1147354 CCTGAAATCCTTAACGATTCATCCAATGTTGATTATATTTTGGCTGATGTCTATTCGTTT 1147413 || || ||||| ||||| || |||| || | ||| | || || || || || ||| Sbjct 293165 CCCGAGATCCTCAACGAGGTGACCGATGTGGACTTCATTCTCGCCGACGTGTACTCCTTT 293106 Query 1147414 GGCATCATTCTCTGGGA 1147430 ||| |||| |||||||| Sbjct 293105 GGCGTCATCCTCTGGGA 293089 Score = 107 bits (118), Expect = 2e-17 Identities = 130/177 (73%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 1147114 AATGAGTTAATTCCGGAAATTCCTTTTGCCCTCAAACTAAAGATTGCTTATCAAGCTTCC 1147173 || ||| | ||||| || ||||| | | |||| | | ||||| || || || || || Sbjct 39680 AACGAGCTCATTCCTGAGATTCCGCTGGAGCTCACAGTGAAGATGGCGTACCAGGCGGCC 39621 Query 1147174 AAGGGAATGCATTTTCTACATTCGTCTGGTATTGTTCATCGTGATCTCAAGTCACTTAAT 1147233 ||||| ||||| || || || ||||| || || || || || || |||||||| || || Sbjct 39620 AAGGGGATGCACTTCCTGCACTCGTCGGGCATCGTGCACCGCGACCTCAAGTCGCTCAAC 39561 Query 1147234 TTGTTGTTGGATTCCAAGTGGAATGTCAAAGTTAGTGATTTTGGTTTGACCAAGTTC 1147290 || || | || |||||||||| ||||| || || || ||||| ||||||||||| Sbjct 39560 CTGCTGCTCGACGCCAAGTGGAACGTCAAGGTGAGCGACTTTGGGCTGACCAAGTTC 39504 Score = 105 bits (116), Expect = 5e-17 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 1001563 AGTTAATTCATAATGAACTAATTCCTGAAATTCCATTCGCTCTCAAAGTTAAAATGGCTT 1001622 |||| | || ||||| || ||||| || ||||||||||| || || | || ||||| | Sbjct 293413 AGTTGCTGCACAATGAGCTCATTCCGGACATTCCATTCGCGCTGAAGGCCAAGATGGCGT 293354 Query 1001623 ACCAAGCTTCAAAAGGAATGCATTTTCTCCATTCATCCGGAATTGTTCATCGTGATCTTA 1001682 |||||| || || || ||||| || || || || || || || || || || || || | Sbjct 293353 ACCAAGGCTCGAAGGGCATGCACTTCCTGCACTCGTCGGGCATCGTGCACCGCGACCTCA 293294 Query 1001683 AATCACTCAATTTGCTACTTGATGCTAAATGGAATGTTAAAGTTAGCGATTTTGGTTTGA 1001742 |||| ||||| |||| || || | || ||||| || || || ||| |||||| | | Sbjct 293293 AATCGCTCAACCTGCTGCTCGACTCCAAGTGGAACGTCAAGGTCTCCGACTTTGGTCTCA 293234 Query 1001743 CAAAATTCAAG 1001753 | || |||||| Sbjct 293233 CCAAGTTCAAG 293223 Score = 104 bits (114), Expect = 2e-16 Identities = 129/177 (73%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 1147114 AATGAGTTAATTCCGGAAATTCCTTTTGCCCTCAAACTAAAGATTGCTTATCAAGCTTCC 1147173 || ||| | ||||| || ||||| | | ||| | | ||||| || || || || || Sbjct 21591 AACGAGCTCATTCCTGAGATTCCGCTGGAGCTCTCAGTGAAGATGGCGTACCAGGCGGCC 21532 Query 1147174 AAGGGAATGCATTTTCTACATTCGTCTGGTATTGTTCATCGTGATCTCAAGTCACTTAAT 1147233 ||||| ||||| || || || ||||| || || || || || || |||||||| || || Sbjct 21531 AAGGGGATGCACTTCCTGCACTCGTCGGGCATCGTGCACCGCGACCTCAAGTCGCTCAAC 21472 Query 1147234 TTGTTGTTGGATTCCAAGTGGAATGTCAAAGTTAGTGATTTTGGTTTGACCAAGTTC 1147290 || || | || |||||||||| ||||| || || || ||||| ||||||||||| Sbjct 21471 CTGCTGCTCGACGCCAAGTGGAACGTCAAGGTGAGCGACTTTGGGCTGACCAAGTTC 21415 Score = 93.3 bits (102), Expect = 3e-13 Identities = 116/159 (73%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 1147132 ATTCCTTTTGCCCTCAAACTAAAGATTGCTTATCAAGCTTCCAAGGGAATGCATTTTCTA 1147191 |||||| | | ||| || ||||| || || || || ||||||| ||||| || ||| Sbjct 185706 ATTCCTCTCTCGCTCTGCCTCAAGATGGCGTACCAGGCGGCCAAGGGCATGCACTTCCTA 185765 Query 1147192 CATTCGTCTGGTATTGTTCATCGTGATCTCAAGTCACTTAATTTGTTGTTGGATTCCAAG 1147251 || ||||| || ||||| || || || |||||||| || || | | | || ||||| Sbjct 185766 CACTCGTCGGGCATTGTGCACCGCGACCTCAAGTCCCTCAACCTCCTCCTCGACGCCAAG 185825 Query 1147252 TGGAATGTCAAAGTTAGTGATTTTGGTTTGACCAAGTTC 1147290 ||||| |||| || || || || || |||||||||||| Sbjct 185826 TGGAACCTCAAGGTCAGCGACTTCGGCTTGACCAAGTTC 185864 Score = 89.7 bits (98), Expect = 4e-12 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 1147114 AATGAGTTAATTCCGGAAATTCCTTTTGCCCTCAAACTAAAGATTGCTTATCAAGCTTCC 1147173 || ||| | || ||||| | || | || || || | ||||| || || || || || Sbjct 247071 AACGAGCTCATCCCGGAGCTGCCGATCGCGCTGAAGGTGAAGATGGCGTACCAGGCGGCC 247012 Query 1147174 AAGGGAATGCATTTTCTACATTCGTCTGGTATTGTTCATCGTGATCTCAAGTCACTTAAT 1147233 ||||| ||||| || || || ||||| || || || || || || |||||||| || || Sbjct 247011 AAGGGCATGCACTTCCTGCACTCGTCGGGCATCGTGCACCGCGACCTCAAGTCGCTCAAC 246952 Query 1147234 TTGTTGTTGGATTCCAAGTGGAATGTCAAAGTTAGTGATTTTGGTTTGACCAAGTTCAA 1147292 || || | || ||||||||| ||||| || || |||||| | ||||||||||| Sbjct 246951 CTGCTGCTCGACAACAAGTGGAACGTCAAGGTCTCCGACTTTGGTCTCACCAAGTTCAA 246893 >seq1365 Length=922901 Score = 113 bits (124), Expect = 4e-19 Identities = 225/331 (68%), Gaps = 7/331 (2%) Strand=Plus/Minus Query 1147114 AATGAGTTAATTCCGGAAATTCCTTTTGCCCTCAAACTAAAGATTGCTTATCAAGCTTCC 1147173 || ||| | || ||||| | || || || ||||| ||||| || || || || ||| Sbjct 284519 AACGAGCTGATCCCGGAGCTGCCGTTCGCGCTCAAGGCCAAGATGGCCTACCAGGCCTCC 284460 Query 1147174 AAGGGAATGCATTTTCTACATTCGTCTGGTATTGTTCATCGTGATCTCAAGTCACTTAAT 1147233 ||||| ||||| || || || ||||| || || || || || || |||||||| || || Sbjct 284459 AAGGGCATGCACTTCCTCCACTCGTCGGGCATCGTGCACCGCGACCTCAAGTCGCTCAAC 284400 Query 1147234 TTGTTGTTGGATTCCAAGTGGAATGTCAAAGTTAGTGATTTTGGTTTGACCAAGTTCAAA 1147293 || || | || |||||||||| ||||| || || || ||||| | ||||||||||| Sbjct 284399 CTGCTGCTCGACGCCAAGTGGAACGTCAAGGTGAGCGACTTTGGCCTCACCAAGTTCAAG 284340 Query 1147294 TCTGATATGGATAAAAACAAATC-CGAAAAACAAC-TTAACTGTAGCATTCATTGGACAG 1147351 || | | || || | || || | || | | | ||| | |||||||| | Sbjct 284339 GAGGACGTCAAGAACAAGACGTCGCG-----CGACGTGGCCGGCAGCGTGCATTGGACGG 284285 Query 1147352 CTCCTGAAATCCTTAACGATTCATCCAATGTTGATTATATTTTGGCTGATGTCTATTCGT 1147411 | || || | || ||||| || | | || || | || ||||| || ||||| | Sbjct 284284 CGCCGGAGGTGCTCAACGAGTCGGGCGACGTGGACTTCATCTTGGCCGACGTCTACAGCT 284225 Query 1147412 TTGGCATCATTCTCTGGGAATTGTTTACTCG 1147442 | |||||||| |||||||| || | ||||| Sbjct 284224 TCGGCATCATCCTCTGGGAGCTGCTCACTCG 284194 Score = 111 bits (122), Expect = 1e-18 Identities = 132/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 1147114 AATGAGTTAATTCCGGAAATTCCTTTTGCCCTCAAACTAAAGATTGCTTATCAAGCTTCC 1147173 || ||| | |||||||| | || || || ||||| ||||| || || || || ||| Sbjct 360337 AACGAGCTGATTCCGGAGCTGCCGTTCGCGCTCAAGGCCAAGATGGCCTACCAGGCCTCC 360278 Query 1147174 AAGGGAATGCATTTTCTACATTCGTCTGGTATTGTTCATCGTGATCTCAAGTCACTTAAT 1147233 ||||| ||||| || || || ||||| || || || || || || |||||||| || || Sbjct 360277 AAGGGCATGCACTTCCTCCACTCGTCGGGCATCGTGCACCGCGACCTCAAGTCGCTCAAC 360218 Query 1147234 TTGTTGTTGGATTCCAAGTGGAATGTCAAAGTTAGTGATTTTGGTTTGACCAAGTTCAA 1147292 || || | || |||||||||| ||||| || || || ||||| | ||||||||||| Sbjct 360217 CTGCTGCTTGACACCAAGTGGAACGTCAAGGTGAGCGACTTTGGCCTCACCAAGTTCAA 360159 Score = 104 bits (114), Expect = 2e-16 Identities = 116/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 1147114 AATGAGTTAATTCCGGAAATTCCTTTTGCCCTCAAACTAAAGATTGCTTATCAAGCTTCC 1147173 || ||||| |||||||| ||||| || ||||| ||||| || || || || ||| Sbjct 193498 AACGAGTTGATTCCGGACATTCCGTTCCAGCTCAAGGGCAAGATGGCCTACCAGGCCTCC 193557 Query 1147174 AAGGGAATGCATTTTCTACATTCGTCTGGTATTGTTCATCGTGATCTCAAGTCACTTAAT 1147233 ||||| ||||| || || || ||||| || || || || || |||||||||||||| || Sbjct 193558 AAGGGCATGCACTTCCTCCACTCGTCGGGCATCGTGCACCGCGATCTCAAGTCACTCAAC 193617 Query 1147234 TTGTTGTTGGATTCCAAGTGGAATGTCAAAGTTAG 1147268 ||| | | || |||||||||| ||||| || || Sbjct 193618 TTGCTCCTCGACGCCAAGTGGAACGTCAAGGTGAG 193652 Score = 100 bits (110), Expect = 2e-15 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 1147153 AAGATTGCTTATCAAGCTTCCAAGGGAATGCATTTTCTACATTCGTCTGGTATTGTTCAT 1147212 ||||| || || || || ||||||| ||||| || || || ||||| || || || || Sbjct 177280 AAGATGGCCTACCAGGCGGCCAAGGGCATGCACTTCCTCCACTCGTCGGGCATCGTGCAC 177221 Query 1147213 CGTGATCTCAAGTCACTTAATTTGTTGTTGGATTCCAAGTGGAATGTCAAAGTTAGTGAT 1147272 || || |||||||| || || || || | || |||||||||| ||||| || || || Sbjct 177220 CGCGACCTCAAGTCGCTCAACCTGCTGCTCGACGCCAAGTGGAACGTCAAGGTGAGCGAC 177161 Query 1147273 TTTGGTTTGACCAAGTTCAA 1147292 |||||| | ||||||||||| Sbjct 177160 TTTGGTCTCACCAAGTTCAA 177141 Score = 100 bits (110), Expect = 2e-15 Identities = 131/180 (73%), Gaps = 1/180 (1%) Strand=Plus/Plus Query 1147114 AATGAGTTAATTCCGGAAATTCCTTTTGCCCTCAAACTAAAGATTGCTTATCAAGCTTCC 1147173 || ||| | |||||||| | || || || ||||| ||||| || || || || ||| Sbjct 388531 AACGAGCTGATTCCGGAGCTGCCGTTCGCGCTCAAGGCCAAGATGGCCTACCAGGCCTCC 388590 Query 1147174 AAGG-GAATGCATTTTCTACATTCGTCTGGTATTGTTCATCGTGATCTCAAGTCACTTAA 1147232 |||| | ||||| || || || ||||| || || || || || || |||||||| || || Sbjct 388591 AAGGTGCATGCACTTCCTCCACTCGTCGGGCATCGTGCACCGCGACCTCAAGTCGCTCAA 388650 Query 1147233 TTTGTTGTTGGATTCCAAGTGGAATGTCAAAGTTAGTGATTTTGGTTTGACCAAGTTCAA 1147292 || || | || |||||||||| ||||| || || || || || | ||||||||||| Sbjct 388651 CCTGCTGCTCGACGCCAAGTGGAACGTCAAGGTGAGCGACTTCGGCCTCACCAAGTTCAA 388710 Score = 96.9 bits (106), Expect = 3e-14 Identities = 121/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 1147127 CGGAAATTCCTTTTGCCCTCAAACTAAAGATTGCTTATCAAGCTTCCAAGGGAATGCATT 1147186 |||| | || || || ||||| ||||| || || || || |||||||| ||||| | Sbjct 333215 CGGAGCTGCCGTTCGCGCTCAAGGCCAAGATGGCCTACCAGGCCTCCAAGGGCATGCACT 333156 Query 1147187 TTCTACATTCGTCTGGTATTGTTCATCGTGATCTCAAGTCACTTAATTTGTTGTTGGATT 1147246 | || || ||||| || || || || || || |||||||| || || || || | || Sbjct 333155 TCCTCCACTCGTCGGGCATCGTGCACCGCGACCTCAAGTCGCTCAACCTGCTGCTCGACA 333096 Query 1147247 CCAAGTGGAATGTCAAAGTTAGTGATTTTGGTTTGACCAAGTTCAA 1147292 |||||||| | ||||| || || || ||||| | ||||||||||| Sbjct 333095 CCAAGTGGGACGTCAAGGTGAGCGACTTTGGCCTCACCAAGTTCAA 333050 Score = 86.0 bits (94), Expect = 5e-11 Identities = 119/167 (71%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 1003443 AATGTTAAAGTAGCTGATTTTGGCTTTGCGCGCATCAAACAAGAAAATGCAACAATGACT 1003502 || || || || || || ||||| || ||||||||||| | || || || || ||||| Sbjct 224140 AACGTGAAGGTGGCCGACTTTGGGTTCGCGCGCATCAAGGAGGAGAACGCCACGATGACC 224081 Query 1003503 CGCTGTGGTACTCCGTGTTGGACAGCACCCGAAATTATTCGTGGAGAAAAATACAACGAA 1003562 || ||||| || ||||| ||||| || || || || | || || || || ||| |||| Sbjct 224080 CGGTGTGGCACGCCGTGCTGGACGGCGCCGGAGATCCTGCGCGGGGAGAAGTACGACGAG 224021 Query 1003563 AAAGCAGATGTATTTTCATTTGGTGTAGTTATGTGGGAAATGGTGAC 1003609 || || || || || || || || || |||||| | ||||||| Sbjct 224020 CGCGCCGACGTGTTCTCCTTCGGCGTGGTCATGTGGCAGGTGGTGAC 223974 >seq618 Length=7599 Score = 105 bits (116), Expect = 5e-17 Identities = 93/116 (80%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 1147153 AAGATTGCTTATCAAGCTTCCAAGGGAATGCATTTTCTACATTCGTCTGGTATTGTTCAT 1147212 ||| | || || || || |||||||| ||||| ||| | || ||||| || || |||||| Sbjct 6595 AAGGTGGCCTACCAGGCCTCCAAGGGCATGCACTTTTTGCACTCGTCAGGCATCGTTCAT 6536 Query 1147213 CGTGATCTCAAGTCACTTAATTTGTTGTTGGATTCCAAGTGGAATGTCAAAGTTAG 1147268 |||||||||||||| || ||| | || |||||||||||||||| ||||| || || Sbjct 6535 CGTGATCTCAAGTCCCTCAATCTTCTGCTGGATTCCAAGTGGAACGTCAAGGTAAG 6480 Score = 87.8 bits (96), Expect = 1e-11 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 1003443 AATGTTAAAGTAGCTGATTTTGGCTTTGCGCGCATCAAACAAGAAAATGCAACAATGACT 1003502 || || || || || || ||||| || ||||||||||| | || || || || ||||| Sbjct 4148 AACGTGAAGGTGGCCGACTTTGGATTCGCGCGCATCAAGGAGGAGAACGCGACGATGACC 4089 Query 1003503 CGCTGTGGTACTCCGTGTTGGACAGCACCCGAAATTATTCGTGGAGAAAAATACAACGAA 1003562 |||||||| || || || ||||| || || || | || || || || || ||| ||||| Sbjct 4088 CGCTGTGGCACCCCCTGCTGGACGGCGCCGGAGGTCATCCGCGGCGAGAAGTACGACGAA 4029 Query 1003563 AAAGCAGATGTATTTTCATTTGGTGTAGTTATGTGGGA 1003600 || || || || | || ||||| | | |||||||| Sbjct 4028 AAGGCCGACGTGTACTCGTTTGGCATCATCATGTGGGA 3991 >seq894 Length=1401 Score = 104 bits (114), Expect = 2e-16 Identities = 129/177 (73%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 1147114 AATGAGTTAATTCCGGAAATTCCTTTTGCCCTCAAACTAAAGATTGCTTATCAAGCTTCC 1147173 || ||| | ||||| || || || | | || || | ||||| || || || || || Sbjct 404 AACGAGCTCATTCCAGACATACCGCTGGAGCTGAAGGTGAAGATGGCGTACCAGGCGGCC 345 Query 1147174 AAGGGAATGCATTTTCTACATTCGTCTGGTATTGTTCATCGTGATCTCAAGTCACTTAAT 1147233 ||||| ||||| || || || ||||| || || || || || || ||||||||||| || Sbjct 344 AAGGGGATGCACTTCCTGCACTCGTCGGGCATCGTGCACCGCGACCTCAAGTCACTCAAC 285 Query 1147234 TTGTTGTTGGATTCCAAGTGGAATGTCAAAGTTAGTGATTTTGGTTTGACCAAGTTC 1147290 || || | || |||||||||| ||||| || || || ||||| ||||||||||| Sbjct 284 CTGCTGCTCGACGCCAAGTGGAACGTCAAGGTGAGCGACTTTGGGCTGACCAAGTTC 228 >seq638 Length=1393837 Score = 104 bits (114), Expect = 2e-16 Identities = 216/319 (68%), Gaps = 7/319 (2%) Strand=Plus/Plus Query 1147114 AATGAGTTAATTCCGGAAATTCCTTTTGCCCTCA--AACTAAAGATTGCTTATCAAGCTT 1147171 || ||| | || ||||| || || || || || ||| ||||| || || || || Sbjct 1040233 AACGAGCTGATCCCGGACATCCCGTTCGCGCTGCGCAAC--AAGATGGCCTACCAGGCGG 1040290 Query 1147172 CCAAGGGAATGCATTTTCTACATTCGTCTGGTATTGTTCATCGTGATCTCAAGTCACTTA 1147231 ||||||| ||||| || || || ||||| || || || || || || |||||||| || | Sbjct 1040291 CCAAGGGCATGCACTTCCTCCACTCGTCGGGCATCGTGCACCGCGACCTCAAGTCCCTCA 1040350 Query 1147232 ATTTGTTGTTGGATTCCAAGTGGAATGTCAAAGTTAGTGATTTTGGTTTGACCAAGTTCA 1147291 | || | | || ||||||||||| ||||| || || || || || |||||||||||| Sbjct 1040351 ACCTGCTCCTCGACTCCAAGTGGAACGTCAAGGTGAGCGACTTCGGCCTGACCAAGTTCA 1040410 Query 1147292 AATCTGATATGGATAAAAACAAATCCGAAAAACAACTTAACTGTAGCATTCATTGGACAG 1147351 | || ||| || ||| | | || | | | | ||| | || ||||| | Sbjct 1040411 AGGAGGAGATG---AACCGCAACGCGGCCAAGGAGGTCCAGGGCAGCGTGCACTGGACGG 1040467 Query 1147352 CTCCTGAAATCCTTAACGATTCATCCAATGTTGATTATATTTTGGCTGATGTCTATTCGT 1147411 | || || ||||| ||||| | || | || || || |||| || ||||||||| Sbjct 1040468 CGCCAGAGATCCTCAACGAGGCCATGGATATCGACTACATGGTGGCCGACATCTATTCGT 1040527 Query 1147412 TTGGCATCATTCTCTGGGA 1147430 | |||||||| | ||||| Sbjct 1040528 TCGGCATCATCTTGTGGGA 1040546 >seq108 Length=164275 Score = 102 bits (112), Expect = 7e-16 Identities = 193/282 (68%), Gaps = 3/282 (1%) Strand=Plus/Minus Query 1147153 AAGATTGCTTATCAAGCTTCCAAGGGAATGCATTTTCTACATTCGTCTGGTATTGTTCAT 1147212 ||||| || || || || ||||||| ||||| || || || ||||| || || || || Sbjct 128589 AAGATGGCCTACCAGGCCGCCAAGGGCATGCACTTCCTCCACTCGTCGGGCATCGTGCAC 128530 Query 1147213 CGTGATCTCAAGTCACTTAATTTGTTGTTGGATTCCAAGTGGAATGTCAAAGTTAGTGAT 1147272 || || |||||||| |||||| || || | || ||||||||| ||||| || || Sbjct 128529 CGCGACCTCAAGTCCCTTAATCTGCTGCTCGACAACAAGTGGAACGTCAAGGTCTCCGAC 128470 Query 1147273 TTTGGTTTGACCAAGTTCAAATCTGATATGGATAAAAACAAATCCGAAAAACAACTTAAC 1147332 |||||| ||||||||||||| || ||| | | | ||| || | | | Sbjct 128469 TTTGGTCTGACCAAGTTCAAGGAGGAGATGAAGCGCGGCGGAGGCGACAAGGAGATGCAG 128410 Query 1147333 TGTAGCATTCATTGGACAGCTCCTGAAATCCTTAACGATTCATCCAATGTTGATTATATT 1147392 | ||| | || |||| || || || || || ||||| | || || || || || Sbjct 128409 GGCAGCGTCCACTGGATGGCGCCCGAGATTCTCAACGA-GGAGCC--GGTCGACTACATG 128353 Query 1147393 TTGGCTGATGTCTATTCGTTTGGCATCATTCTCTGGGAATTG 1147434 ||||| ||| |||| || |||||||| |||||||||||| Sbjct 128352 TTGGCCGATATCTACAGCTTCGGCATCATCCTCTGGGAATTG 128311 >seq666 Length=190869 Score = 100 bits (110), Expect = 2e-15 Identities = 121/165 (73%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 1003392 ATTATTCATAGAGATATCAAATCAAGCAATATTCTGGTTGATGAAAATGATAATGTTAAA 1003451 ||||||||| | ||| |||| || |||| | ||||| ||||| || ||||| || Sbjct 182769 ATTATTCATCGCGATCTCAAGCCATCCAATCTGCTGGTGGATGAGAACTGGAATGTGAAG 182828 Query 1003452 GTAGCTGATTTTGGCTTTGCGCGCATCAAACAAGAAAATGCAACAATGACTCGCTGTGGT 1003511 || || ||||| || || ||||||||||| | || || || || ||||| ||||| || Sbjct 182829 GTGGCCGATTTCGGGTTCGCGCGCATCAAGGAGGAGAACGCCACCATGACCCGCTGCGGC 182888 Query 1003512 ACTCCGTGTTGGACAGCACCCGAAATTATTCGTGGAGAAAAATAC 1003556 || || || ||||| |||||||| || | || || || || ||| Sbjct 182889 ACGCCCTGCTGGACCGCACCCGAGATACTCCGCGGCGAGAAGTAC 182933 >seq496 Length=104993 Score = 100 bits (110), Expect = 2e-15 Identities = 193/285 (68%), Gaps = 0/285 (0%) Strand=Plus/Plus Query 1146981 GGATGAAGTCAGAATCATGAAAAGCTTGAGACATCCTAATGTTGTATTGTTTATGGCAGC 1147040 ||| || || || |||||| | || | || || || || || | || ||||| || Sbjct 88004 GGACGAGGTGCGAGTCATGAGCCGTCTGCGGCACCCCAACGTGGTCCTCTTCATGGCCGC 88063 Query 1147041 ATCCACACGCCCTCCCAAGATGTGTATTGTAATGGAATTTATGTCACTGGGAAGTCTATG 1147100 | ||| || || || |||| || || ||||| || ||| | || || || | Sbjct 88064 CTGCACGCGACCGCCGCGTCTGTGCATCGTGATGGAGTTCATGGCGCTCGGGTCGCTCTA 88123 Query 1147101 TGAAATTCTCGAGAATGAGTTAATTCCGGAAATTCCTTTTGCCCTCAAACTAAAGATTGC 1147160 || | ||| |||| ||| | || ||||| ||||| | |||||| | ||||| || Sbjct 88124 CGACCTGCTCCAGAACGAGCTCATACCGGACATTCCCCACGGCCTCAAGTTCAAGATGGC 88183 Query 1147161 TTATCAAGCTTCCAAGGGAATGCATTTTCTACATTCGTCTGGTATTGTTCATCGTGATCT 1147220 || || || ||||||| ||||| || || || ||||| || || || || || || || Sbjct 88184 CTACCAGGCGGCCAAGGGCATGCACTTCCTCCACTCGTCGGGCATCGTGCACCGCGACCT 88243 Query 1147221 CAAGTCACTTAATTTGTTGTTGGATTCCAAGTGGAATGTCAAAGT 1147265 |||||| || || || | | || |||||||||||||||| || Sbjct 88244 CAAGTCGCTCAACCTGCTCCTCGACGCCAAGTGGAATGTCAAGGT 88288 >seq754 Length=611063 Score = 98.7 bits (108), Expect = 8e-15 Identities = 129/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 1147114 AATGAGTTAATTCCGGAAATTCCTTTTGCCCTCAAACTAAAGATTGCTTATCAAGCTTCC 1147173 |||||| | || |||||| | || || || ||||| ||||| || || || || ||| Sbjct 23317 AATGAGCTGATCCCGGAACTGCCGTTCGCGCTCAAGGCCAAGATGGCCTACCAGGCCTCC 23376 Query 1147174 AAGGGAATGCATTTTCTACATTCGTCTGGTATTGTTCATCGTGATCTCAAGTCACTTAAT 1147233 ||||| ||||| || || || || || || || || || || || | ||||| || ||| Sbjct 23377 AAGGGCATGCACTTCCTCCACTCCTCGGGCATCGTGCACCGCGACTTGAAGTCGCTCAAT 23436 Query 1147234 TTGTTGTTGGATTCCAAGTGGAATGTCAAAGTTAGTGATTTTGGTTTGACCAAGTTCAA 1147292 || || | || |||||||||| ||||| || || || || ||||||||||||| Sbjct 23437 CTGCTGCTCGACGCCAAGTGGAACGTCAAGGTGTCGGACTTCGGCCTGACCAAGTTCAA 23495 >seq1182 Length=1895500 Score = 96.9 bits (106), Expect = 3e-14 Identities = 115/154 (75%), Gaps = 4/154 (3%) Strand=Plus/Minus Query 1147114 AATGAGTTAATTCCGGAAATTCCTTTTGCCCTCA--AACTAAAGATTGCTTATCAAGCTT 1147171 || ||| | |||||||| || || || || || ||| ||||| || || || || Sbjct 1217522 AACGAGCTGATTCCGGACATCCCGTTCGCGCTGCGCAAC--AAGATGGCCTACCAGGCGG 1217465 Query 1147172 CCAAGGGAATGCATTTTCTACATTCGTCTGGTATTGTTCATCGTGATCTCAAGTCACTTA 1147231 ||||||| ||||| || || || ||||| || || || ||||| ||||||||||| || | Sbjct 1217464 CCAAGGGCATGCACTTCCTCCACTCGTCCGGCATCGTCCATCGCGATCTCAAGTCGCTCA 1217405 Query 1147232 ATTTGTTGTTGGATTCCAAGTGGAATGTCAAAGT 1147265 ||||| | | || ||||||||||| ||||| || Sbjct 1217404 ATTTGCTCCTCGACTCCAAGTGGAACGTCAAGGT 1217371 >seq422 Length=916903 Score = 96.9 bits (106), Expect = 3e-14 Identities = 91/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 1147153 AAGATTGCTTATCAAGCTTCCAAGGGAATGCATTTTCTACATTCGTCTGGTATTGTTCAT 1147212 ||| | || || || || |||||||| ||||| ||| | || || || || || |||||| Sbjct 725389 AAGGTGGCCTACCAGGCCTCCAAGGGCATGCACTTTTTGCACTCATCGGGCATCGTTCAT 725330 Query 1147213 CGTGATCTCAAGTCACTTAATTTGTTGTTGGATTCCAAGTGGAATGTCAAAGTTAG 1147268 |||||||| ||||| || ||| | || |||||||||||||||| ||||| || || Sbjct 725329 CGTGATCTAAAGTCCCTCAATCTTCTGCTGGATTCCAAGTGGAACGTCAAGGTAAG 725274 >seq40 Length=205865 Score = 93.3 bits (102), Expect = 3e-13 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 1147144 CTCAAACTAAAGATTGCTTATCAAGCTTCCAAGGGAATGCATTTTCTACATTCGTCTGGT 1147203 ||||| | ||||| | ||| || || ||||||| ||||| || || || ||||| || Sbjct 141041 CTCAAGGTCAAGATGGTTTACCAGGCGGCCAAGGGCATGCACTTCCTCCACTCGTCGGGC 141100 Query 1147204 ATTGTTCATCGTGATCTCAAGTCACTTAATTTGTTGTTGGATTCCAAGTGGAATGTCAAA 1147263 || || || || ||||||||||| || || | || | || |||||||||| ||||| Sbjct 141101 ATCGTGCACCGCGATCTCAAGTCGCTCAACCTCCTGCTCGACGCCAAGTGGAACGTCAAG 141160 Query 1147264 GTTAGTGATTTTGGTTTGACCAAGTTCAA 1147292 || || |||||| | ||||||||||| Sbjct 141161 GTGTCCGACTTTGGTCTCACCAAGTTCAA 141189 Score = 86.0 bits (94), Expect = 5e-11 Identities = 119/167 (71%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 1003443 AATGTTAAAGTAGCTGATTTTGGCTTTGCGCGCATCAAACAAGAAAATGCAACAATGACT 1003502 || || || || || ||||| ||||| ||||||||||| | || || || || ||||| Sbjct 143673 AACGTGAAGGTCGCCGATTTCGGCTTCGCGCGCATCAAGGAGGAGAACGCCACCATGACC 143732 Query 1003503 CGCTGTGGTACTCCGTGTTGGACAGCACCCGAAATTATTCGTGGAGAAAAATACAACGAA 1003562 ||||| || || || ||||| || || || || ||||| || || || ||| ||| Sbjct 143733 CGCTGCGGCACGCCCGCCTGGACCGCGCCGGAGATCATTCGCGGCGAGAAGTACTCCGAG 143792 Query 1003563 AAAGCAGATGTATTTTCATTTGGTGTAGTTATGTGGGAAATGGTGAC 1003609 || || ||| | | ||||| || || |||||||| ||| |||| Sbjct 143793 AAGGCCGATCTGTACAGCTTTGGCGTCGTCATGTGGGAGATGCTGAC 143839 >seq990 Length=1179915 Score = 91.5 bits (100), Expect = 1e-12 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 1147153 AAGATTGCTTATCAAGCTTCCAAGGGAATGCATTTTCTACATTCGTCTGGTATTGTTCAT 1147212 |||| || || || || ||||||| ||||| || || || ||||| || || || || Sbjct 923135 AAGACCGCCTACCAGGCCGCCAAGGGCATGCACTTCCTGCACTCGTCGGGCATCGTGCAC 923076 Query 1147213 CGTGATCTCAAGTCACTTAATTTGTTGTTGGATTCCAAGTGGAATGTCAAAGTTAGTGAT 1147272 || || |||||||| || ||| || || | || ||||||||||||||||| || || Sbjct 923075 CGCGACCTCAAGTCGCTCAATCTGCTGCTCGACTCCAAGTGGAATGTCAAGGTGTCCGAC 923016 Query 1147273 TTTGGTTTGACCAAGTTC 1147290 ||||| | ||||||||| Sbjct 923015 TTTGGGCTCACCAAGTTC 922998 >seq723 Length=538283 Score = 91.5 bits (100), Expect = 1e-12 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 1147153 AAGATTGCTTATCAAGCTTCCAAGGGAATGCATTTTCTACATTCGTCTGGTATTGTTCAT 1147212 ||||| || || || || ||||||| ||||| || || || ||||| || || || || Sbjct 4314 AAGATCGCCTACCACGCGGCCAAGGGCATGCACTTCCTCCACTCGTCGGGCATCGTGCAC 4373 Query 1147213 CGTGATCTCAAGTCACTTAATTTGTTGTTGGATTCCAAGTGGAATGTCAAAGT 1147265 || || ||||||||||| ||| || || | || ||||||||||||||||| || Sbjct 4374 CGCGACCTCAAGTCACTCAATCTGCTGCTTGACTCCAAGTGGAATGTCAAGGT 4426 >seq521 Length=740919 Score = 91.5 bits (100), Expect = 1e-12 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 1147153 AAGATTGCTTATCAAGCTTCCAAGGGAATGCATTTTCTACATTCGTCTGGTATTGTTCAT 1147212 ||||| || || || || ||||||| ||||| || || || ||||| || || || ||| Sbjct 84146 AAGATCGCCTACCAGGCGGCCAAGGGCATGCACTTCCTCCACTCGTCGGGCATCGTGCAT 84205 Query 1147213 CGTGATCTCAAGTCACTTAATTTGTTGTTGGATTCCAAGTGGAATGTCAAAGTTAGTGAT 1147272 || || |||||||| || || || || | || ||||||||||| ||||| || || Sbjct 84206 CGCGACCTCAAGTCGCTCAACCTGCTGCTCGACTCCAAGTGGAACGTCAAGGTCTCCGAC 84265 Query 1147273 TTTGGTTTGACCAAGTTCAA 1147292 |||||| | ||| ||| ||| Sbjct 84266 TTTGGTCTCACCCAGTCCAA 84285 >seq542 Length=164111 Score = 89.7 bits (98), Expect = 4e-12 Identities = 129/180 (72%), Gaps = 4/180 (2%) Strand=Plus/Plus Query 1147114 AATGAGTTAATTCCGGAAATTCCTTTTGCCCTCA--AACTAAAGATTGCTTATCAAGCTT 1147171 || ||| | || ||||| || || || || || ||| ||||| || || || || Sbjct 49216 AACGAGCTGATCCCGGACATCCCGTTCGCGCTGCGCAAC--AAGATGGCCTACCAGGCGG 49273 Query 1147172 CCAAGGGAATGCATTTTCTACATTCGTCTGGTATTGTTCATCGTGATCTCAAGTCACTTA 1147231 ||||||| ||||| || || || ||||| || || || || || || ||||| || || | Sbjct 49274 CCAAGGGCATGCACTTCCTCCACTCGTCGGGCATCGTGCACCGCGACCTCAAATCGCTCA 49333 Query 1147232 ATTTGTTGTTGGATTCCAAGTGGAATGTCAAAGTTAGTGATTTTGGTTTGACCAAGTTCA 1147291 | || || | || ||||||||||| ||||| || || ||||| |||||||||||| Sbjct 49334 ACCTGCTGCTCGACTCCAAGTGGAACGTCAAGGTGTCCGACTTTGGCCTGACCAAGTTCA 49393 >seq254 Length=699841 Score = 89.7 bits (98), Expect = 4e-12 Identities = 120/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 1003443 AATGTTAAAGTAGCTGATTTTGGCTTTGCGCGCATCAAACAAGAAAATGCAACAATGACT 1003502 ||||| || || || || |||||||||||||| ||||| | || || || || ||||| Sbjct 272709 AATGTGAAGGTGGCCGACTTTGGCTTTGCGCGGATCAAGGAGGAGAACGCGACCATGACC 272650 Query 1003503 CGCTGTGGTACTCCGTGTTGGACAGCACCCGAAATTATTCGTGGAGAAAAATACAACGAA 1003562 ||||| || || || || ||||| || || || || || || || || || ||| |||| Sbjct 272649 CGCTGCGGCACGCCCTGCTGGACGGCGCCGGAGATCATCCGCGGCGAGAAGTACGACGAG 272590 Query 1003563 AAAGCAGATGTATTTTCATTTGGTGTAGTTATGTGGGAAATGGTGAC 1003609 || || || | || || || || || |||||| | ||||||| Sbjct 272589 CGGGCCGACGTGTACTCGTTCGGGGTGGTCATGTGGCAGGTGGTGAC 272543 >seq628 Length=1085379 Score = 87.8 bits (96), Expect = 1e-11 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 1003443 AATGTTAAAGTAGCTGATTTTGGCTTTGCGCGCATCAAACAAGAAAATGCAACAATGACT 1003502 ||||| || || ||||| ||||| || ||||| ||||| | || || || || ||||| Sbjct 148808 AATGTGAAGGTGGCTGACTTTGGGTTCGCGCGGATCAAGGAGGAGAACGCGACGATGACG 148749 Query 1003503 CGCTGTGGTACTCCGTGTTGGACAGCACCCGAAATTATTCGTGGAGAAAAATACAACGAA 1003562 || || || || ||||||||||| || || || | ||||| || || || ||| |||| Sbjct 148748 CGGTGCGGCACGCCGTGTTGGACGGCGCCGGAGGTGATTCGCGGCGACAAGTACGACGAG 148689 Query 1003563 AAAGCAGATGTATTTTCATTTGGTGTAGTTATGTGG 1003598 || || || || || || || || || |||||| Sbjct 148688 CGGGCCGACGTGTTCTCGTTCGGCGTGGTCATGTGG 148653 >seq615 Length=307551 Score = 87.8 bits (96), Expect = 1e-11 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 1147153 AAGATTGCTTATCAAGCTTCCAAGGGAATGCATTTTCTACATTCGTCTGGTATTGTTCAT 1147212 ||| | || || ||||| |||||||| |||||||| | ||||| || || || || ||| Sbjct 134196 AAGGTCGCCTACCAAGCCTCCAAGGGCATGCATTTCTTGCATTCCTCCGGCATCGTGCAT 134137 Query 1147213 CGTGATCTCAAGTCACTTAATTTGTTGTTGGATTCCAAGTGGAATGTCAAAGT 1147265 || || |||||||| || || || || | || ||||||||||| ||||| || Sbjct 134136 CGCGACCTCAAGTCCCTCAACCTGCTGCTCGACTCCAAGTGGAACGTCAAGGT 134084 >seq696 Length=139578 Score = 86.0 bits (94), Expect = 5e-11 Identities = 115/159 (72%), Gaps = 1/159 (1%) Strand=Plus/Minus Query 1003443 AATGTTAAAGTAGCTGA-TTTTGGCTTTGCGCGCATCAAACAAGAAAATGCAACAATGAC 1003501 || || || || || || |||||| || ||||||||||| | || || || || ||||| Sbjct 10803 AACGTGAAGGTGGCCGACTTTTGGATTCGCGCGCATCAAGGAGGAGAACGCGACGATGAC 10744 Query 1003502 TCGCTGTGGTACTCCGTGTTGGACAGCACCCGAAATTATTCGTGGAGAAAAATACAACGA 1003561 |||||||| || || || ||||| || || || | || || || || || ||| |||| Sbjct 10743 CCGCTGTGGCACCCCCTGCTGGACGGCGCCGGAGGTCATCCGCGGCGAGAAGTACGACGA 10684 Query 1003562 AAAAGCAGATGTATTTTCATTTGGTGTAGTTATGTGGGA 1003600 ||| || || || | || ||||| | | |||||||| Sbjct 10683 AAAGGCCGACGTGTACTCGTTTGGCATCATCATGTGGGA 10645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029215562660290