Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20castellanii_20[genbank_20GCA_5F000193105.1_202011-03- 22] 1,521 sequences; 46,714,639 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq1307 102 6e-17 >seq1307 Length=263854 Score = 102 bits (112), Expect = 6e-17 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 ||||| ||||| || || || || ||||| ||||||| || | | || || | ||| Sbjct 170577 TGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCGTCCTCAAGCTGC 170636 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 ||||| || || || | |||||| ||||| || ||||| || || || || ||||| || Sbjct 170637 TTACCAGCGAAGATGAGACGCTGCTGATCAGGGGGAATACCCTCCTTGTCCTGAATCTTC 170696 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || || || | || | ||||| | || || || || |||| || ||||||||| Sbjct 170697 TGCTTCACGTTCTCGATGGTGTCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTT 170756 Query 101447 AAAGTTTTTACAAATATCTGCATGGT 101472 | || || || || ||||||||||| Sbjct 170757 AGGGTCTTGACGAAGATCTGCATGGT 170782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396271054112997