Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20castellanii_20[genbank_20GCA_5F000193105.1_202011-03- 22] 1,521 sequences; 46,714,639 total letters Query= NC_020844.1 Length=40695 Score E Sequences producing significant alignments: (Bits) Value seq405 82.4 2e-11 >seq405 Length=129346 Score = 82.4 bits (90), Expect = 2e-11 Identities = 119/166 (72%), Gaps = 4/166 (2%) Strand=Plus/Plus Query 2431 TTGGACAGCAGGAAGATGTACTCGTGCGCCTTTGTGCAGCGGTCGCGCACGCTCTCCGGC 2490 |||| | || ||||| |||||||||||| || | ||||||||| || ||| Sbjct 77016 TTGGCAAACAAGAAGACGTACTCGTGCGCGCGCGTCGGCCTGTCGCGCACCGATTCGGGC 77075 Query 2491 ATTGGG--TTTGGCTTGTGCCAGATAATATCCTGACGCAGGTACCAGCCGTCGGCTTGCA 2548 ||| || ||||||||||||| ||| || ||| ||||||||| ||||| || | Sbjct 77076 --TGGCAATTGGGCTTGTGCCAGACAATGTCGGAGTGCAAGTACCAGCCATCGGCCTGGA 77133 Query 2549 GGGCGAACGCTACGCGCCAGGGGATGCCGATAAGGTCTTTTGCTTT 2594 | || ||||| |||||||| || | |||||| || || || | ||| Sbjct 77134 GTGCAAACGCCACGCGCCACGGCAAGCCGATCAGATCCTTGGGTTT 77179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130100050106714