Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20castellanii_20[genbank_20GCA_5F000193105.1_202011-03- 22] 1,521 sequences; 46,714,639 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq1225 111 1e-19 seq638 111 1e-19 seq1307 105 4e-18 seq422 105 4e-18 seq1445 102 5e-17 seq1223 102 5e-17 seq414 100 2e-16 seq932 93.3 3e-14 seq447 87.8 1e-12 >seq1225 Length=780 Score = 111 bits (122), Expect = 1e-19 Identities = 161/224 (72%), Gaps = 4/224 (2%) Strand=Plus/Minus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || ||||| ||| || || |||||||| |||| ||| ||||| |||| || | || Sbjct 606 TGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGC 547 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || ||||| || || | |||||||||||| | || | ||| || ||||| ||| ||| Sbjct 546 TTGCCGGCGAAGATGAGACGCTGCTGATCGGGAGGAATACCCTCCTTGTCCTGAATCTTC 487 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 || ||| || | || | |||||||| || || || || | ||||| || || || || Sbjct 486 TGCTTC-ACGTTCTCGATCGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 428 Query 33726 TAACGTTTTTACAAAGATCTGCATAGTTGG--TGTGTTTATCGC 33767 | || || || ||||||||||| ||||| ||||| || ||| Sbjct 427 CAGGGTCTTCACGAAGATCTGCATTGTTGGCTTGTGTGTAGCGC 384 >seq638 Length=1393837 Score = 111 bits (122), Expect = 1e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || || ||| ||| || || |||||||| |||| ||| ||||| |||| || | || Sbjct 263051 TGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGC 263110 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 |||||||| || || | ||||||||| || | || | ||||| ||||| ||| ||| Sbjct 263111 TTTCCGGCGAAGATAAGACGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGAATCTTC 263170 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 || |||| | | || | ||||||||| || || || || | ||||| || || || || Sbjct 263171 TGCTTCA-CGTTCTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 263229 Query 33726 TAACGTTTTTACAAAGATCTGCATAGTTGG 33755 | || || || ||||||||||| ||||| Sbjct 263230 GAGGGTCTTCACGAAGATCTGCATTGTTGG 263259 Score = 87.8 bits (96), Expect = 1e-12 Identities = 154/219 (70%), Gaps = 4/219 (2%) Strand=Plus/Plus Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593 ||| | ||| | || || ||| ||| || || |||||||| |||| ||| ||||| | Sbjct 262582 ACGGAGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCC 262641 Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653 ||| || | || || ||||| || |||| |||||||| || | || | || || || Sbjct 262642 GTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTT 262701 Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGAT-TCCACGTCAACCGTG 33711 ||| || ||||| |||| ||| || | ||||| | | | || || || | ||| Sbjct 262702 GTCCTGGATCTTCTGCTTCA-CATTCTCGATCGTGTC-CGAGCTCTCGACCTCGAGGGTG 262759 Query 33712 ATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 ||||| ||||| || | ||| || || |||||||||||| Sbjct 262760 ATCGTCTTACCGGTCAGCGTCTTGACGAAGATCTGCATA 262798 Score = 87.8 bits (96), Expect = 1e-12 Identities = 144/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || || ||| ||| || || |||||||| |||| ||| || || |||| || | || Sbjct 262823 TGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCGTCTTCGAGCTGC 262882 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || || || || || | ||||||||| || | || | ||| || ||||| || ||| Sbjct 262883 TTGCCAGCGAAGATGAGACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTC 262942 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 || |||| | | || | ||| ||||| || || || || | || ||||| || || || Sbjct 262943 TGCTTCA-CGTTCTCGATGGTATCGCTCGACTCGACCTCGAGAGTAATCGTCTTGCCGGT 263001 Query 33726 TAACGTTTTTACAAAGATCTGCATA 33750 | || || ||||||||||||||| Sbjct 263002 AAGGGTCTTGACAAAGATCTGCATA 263026 >seq1307 Length=263854 Score = 105 bits (116), Expect = 4e-18 Identities = 149/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || ||||| ||| || || |||||||| |||| ||| ||||| |||| || | || Sbjct 170577 TGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCGTCCTCAAGCTGC 170636 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || || || || || | |||||||||||| | || | ||| || ||||| ||| ||| Sbjct 170637 TTACCAGCGAAGATGAGACGCTGCTGATCAGGGGGAATACCCTCCTTGTCCTGAATCTTC 170696 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 || ||| || | || | ||||||||| || || || || | ||||| || || || || Sbjct 170697 TGCTTC-ACGTTCTCGATGGTGTCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 170755 Query 33726 TAACGTTTTTACAAAGATCTGCATAGT 33752 || || || || ||||||||||| || Sbjct 170756 TAGGGTCTTGACGAAGATCTGCATGGT 170782 Score = 84.2 bits (92), Expect = 1e-11 Identities = 143/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || || ||| ||| || || |||||||| |||| || || || |||| || | || Sbjct 170349 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGAGTACGGCCGTCCTCGAGCTGC 170408 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || ||||| || || | |||||||||||| | || | || || ||||| || ||| Sbjct 170409 TTGCCGGCGAAGATGAGACGCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTGGATCTTC 170468 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 || ||| || | || | |||||| || || || || | |||||||| ||||| || Sbjct 170469 TGCTTC-ACGTTTTCGATGGTGTCCGACGACTCGACCTCGAGGGTGATCGTCTTACCCGT 170527 Query 33726 TAACGTTTTTACAAAGATCTGCATA 33750 | || || || |||||||||||| Sbjct 170528 GAGGGTCTTGACGAAGATCTGCATA 170552 >seq422 Length=916903 Score = 105 bits (116), Expect = 4e-18 Identities = 160/224 (71%), Gaps = 4/224 (2%) Strand=Plus/Minus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || ||||| ||| || || |||||||| |||| ||| ||||| |||| || | || Sbjct 624516 TGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGC 624457 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || ||||| || || | |||||||||||| | || | ||| || ||||| ||| ||| Sbjct 624456 TTGCCGGCGAAGATGAGACGCTGCTGATCGGGAGGAATACCCTCCTTGTCCTGAATCTTC 624397 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 || || || | || | |||||||| || || || || | ||||| || || || || Sbjct 624396 TGCTT-GACGTTCTCGATCGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 624338 Query 33726 TAACGTTTTTACAAAGATCTGCATAGTTGG--TGTGTTTATCGC 33767 | || || || ||||||||||| ||||| ||||| || ||| Sbjct 624337 CAGGGTCTTCACGAAGATCTGCATTGTTGGCTTGTGTGTAGCGC 624294 Score = 87.8 bits (96), Expect = 1e-12 Identities = 144/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || || ||| ||| || || |||||||| || | || || || |||| || | || Sbjct 624972 TGGAGCGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTACGGCCGTCCTCGAGCTGC 624913 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 |||||||| || || | |||||||| || | || | ||| |||||||| ||| ||| Sbjct 624912 TTTCCGGCGAAGATGAGGCGCTGCTGGTCGGGAGGAATACCCTCTTTGTCCTGAATCTTC 624853 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 || || | | | || | |||||||| || || || || | ||||| || || || || Sbjct 624852 TGCTTGA-CGTTCTCGATCGTGTCGCTGGACTCTACCTCGAGGGTGATAGTCTTGCCGGT 624794 Query 33726 TAACGTTTTTACAAAGATCTGCATA 33750 | ||| || || |||||||||||| Sbjct 624793 CAGCGTCTTGACGAAGATCTGCATA 624769 >seq1445 Length=562458 Score = 102 bits (112), Expect = 5e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || ||||| ||| || || |||||||| |||| ||| ||||| |||| || | || Sbjct 27922 TGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCGTCCTCAAGCTGC 27863 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || || || || || | |||||||||||| | || | ||| || ||||| ||| || Sbjct 27862 TTACCAGCGAAGATGAGACGCTGCTGATCAGGGGGAATACCCTCCTTGTCCTGAATCTTT 27803 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 || |||| | | || | ||||||||| || || || || | ||||| || || || || Sbjct 27802 TGCTTCA-CGTTCTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 27744 Query 33726 TAACGTTTTTACAAAGATCTGCATAGTTGG 33755 | || || || ||||||||||| ||||| Sbjct 27743 CAGGGTCTTCACGAAGATCTGCATTGTTGG 27714 Score = 95.1 bits (104), Expect = 8e-15 Identities = 154/218 (71%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593 ||| | ||| | || || ||| ||| || || |||||||| |||| || ||||| | Sbjct 28390 ACGGAGCACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCC 28331 Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653 ||| || | || || ||||| || || | ||||||||||| | || | ||| || || Sbjct 28330 GTCCTCGAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGATCAGGGGGAATACCCTCCTT 28271 Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGA 33712 ||| || ||||| ||| || | || | ||||||||| || || || || | |||| Sbjct 28270 GTCCTGGATCTTCTGCTTC-ACGTTCTCGATGGTGTCGCTGGACTCGACCTCGAGGGTGA 28212 Query 33713 TCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || ||||| | | | || || || |||||||||||| Sbjct 28211 TGGTCTTACCCG-TGAGGTCTTGACGAAGATCTGCATA 28175 Score = 84.2 bits (92), Expect = 1e-11 Identities = 143/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || || ||| ||| || || |||||||| |||| || ||||| |||| || | || Sbjct 28150 TGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGAGTGCGGCCGTCCTCGAGCTGC 28091 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || ||||| || || | |||||||||||| | || | ||| || ||||| || ||| Sbjct 28090 TTGCCGGCGAAGATGAGACGCTGCTGATCAGGGGGGATACCCTCCTTGTCCTGGATCTTC 28031 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 || ||| || | || | |||||| || || || || | || ||||| || || || Sbjct 28030 TGCTTC-ACGTTCTCAATCGTGTCGGACGACTCGACCTCGAGAGTAATCGTCTTGCCGGT 27972 Query 33726 TAACGTTTTTACAAAGATCTGCATA 33750 | || || || |||||||||||| Sbjct 27971 GAGGGTCTTGACGAAGATCTGCATA 27947 >seq1223 Length=762 Score = 102 bits (112), Expect = 5e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || ||||| ||| || || |||||||| |||| ||| ||||| |||| || | || Sbjct 519 TGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCGTCCTCAAGCTGC 578 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || || || || || | |||||||||||| | || | ||| || ||||| ||| || Sbjct 579 TTACCAGCGAAGATGAGACGCTGCTGATCAGGGGGAATACCCTCCTTGTCCTGAATCTTT 638 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 || ||| || | || | ||||||||| || || || || | ||||| || || || || Sbjct 639 TGCTTC-ACGTTCTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 697 Query 33726 TAACGTTTTTACAAAGATCTGCATAGTTGG 33755 | || || || ||||||||||| ||||| Sbjct 698 CAGGGTCTTCACGAAGATCTGCATTGTTGG 727 Score = 95.1 bits (104), Expect = 8e-15 Identities = 154/218 (71%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593 ||| | ||| | || || ||| ||| || || |||||||| |||| || ||||| | Sbjct 51 ACGGAGCACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCC 110 Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653 ||| || | || || ||||| || || | ||||||||||| | || | ||| || || Sbjct 111 GTCCTCGAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGATCAGGGGGAATACCCTCCTT 170 Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGA 33712 ||| || ||||| ||| || | || | ||||||||| || || || || | |||| Sbjct 171 GTCCTGGATCTTCTGCTTC-ACGTTCTCGATGGTGTCGCTGGACTCGACCTCGAGGGTGA 229 Query 33713 TCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || ||||| | | | || || || |||||||||||| Sbjct 230 TGGTCTTACCCG-TGAGGTCTTGACGAAGATCTGCATA 266 Score = 84.2 bits (92), Expect = 1e-11 Identities = 143/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || || ||| ||| || || |||||||| |||| || ||||| |||| || | || Sbjct 291 TGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGAGTGCGGCCGTCCTCGAGCTGC 350 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || ||||| || || | |||||||||||| | || | ||| || ||||| || ||| Sbjct 351 TTGCCGGCGAAGATGAGACGCTGCTGATCAGGGGGGATACCCTCCTTGTCCTGGATCTTC 410 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 || ||| || | || | |||||| || || || || | || ||||| || || || Sbjct 411 TGCTTC-ACGTTCTCAATCGTGTCGGACGACTCGACCTCGAGAGTAATCGTCTTGCCGGT 469 Query 33726 TAACGTTTTTACAAAGATCTGCATA 33750 | || || || |||||||||||| Sbjct 470 GAGGGTCTTGACGAAGATCTGCATA 494 >seq414 Length=771140 Score = 100 bits (110), Expect = 2e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || ||||| ||| || || |||||||| |||| ||| ||||| |||| || | || Sbjct 166743 TGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGC 166684 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || || || || || | |||||||||||| | || | ||| || ||||| ||| ||| Sbjct 166683 TTGCCAGCGAAGATGAGACGCTGCTGATCAGGGGGAATACCCTCCTTGTCCTGAATCTTC 166624 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 || |||| | | || | ||||||||| || || || || | ||||| || || || || Sbjct 166623 TGCTTCA-CGTTCTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 166565 Query 33726 TAACGTTTTTACAAAGATCTGCAT 33749 | || || || ||||||||||| Sbjct 166564 CAGGGTCTTGACGAAGATCTGCAT 166541 Score = 86.0 bits (94), Expect = 4e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || ||||| ||| || || |||||||| |||| ||| ||||| | || || | || Sbjct 166971 TGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATCCTCGAGCTGC 166912 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || || || || || | |||||||||||| | || | ||| || ||||| || ||| Sbjct 166911 TTGCCAGCGAAGATGAGACGCTGCTGATCGGGAGGAATACCCTCCTTGTCCTGGATCTTC 166852 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 || |||| | | || | ||| ||||| || || || || | || ||||| || || || Sbjct 166851 TGCTTCA-CGTTCTCGATGGTATCGCTGGACTCGACCTCGAGAGTAATCGTCTTGCCGGT 166793 Query 33726 TAACGTTTTTACAAAGATCTGCAT 33749 | || || || ||||||||||| Sbjct 166792 GAGGGTCTTGACGAAGATCTGCAT 166769 >seq932 Length=1165899 Score = 93.3 bits (102), Expect = 3e-14 Identities = 145/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || || ||| ||| || || |||||||| |||| || ||||| |||| || | || Sbjct 390381 TGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGC 390440 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || ||||| || || | ||||||||||| | || | || || ||||| ||| ||| Sbjct 390441 TTGCCGGCGAAGATAAGGCGCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTGAATCTTC 390500 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 || ||| || | || | |||||||| || || || || | ||||| || || || || Sbjct 390501 TGCTTC-ACGTTCTCGATCGTGTCGCTGGACTCGACCTCGAGGGTGATAGTCTTGCCGGT 390559 Query 33726 TAACGTTTTTACAAAGATCTGCATA 33750 | ||| || || |||||||||||| Sbjct 390560 CAGCGTCTTGACGAAGATCTGCATA 390584 Score = 89.7 bits (98), Expect = 3e-13 Identities = 149/212 (70%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618 || || || |||||||| |||| || ||||| |||| || | || || || || || Sbjct 391077 TCCTTCTGGATGTTGTAGTCGGCCAGAGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAG 391136 Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678 || | ||||||||| || | || | ||||| ||||| ||| || || || ||| | Sbjct 391137 ATGAGACGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGAATCTTTTGCTT-AACGTT 391195 Query 33679 GTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC 33737 || | ||||||||| || || || || | ||||| || || || || | || || || Sbjct 391196 CTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 391255 Query 33738 AAAGATCTGCATAGTTGG--TGTGTTTATCGC 33767 ||||||||||| | ||| ||||| || ||| Sbjct 391256 GAAGATCTGCATTGCTGGCTTGTGTGTAGCGC 391287 >seq447 Length=587387 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || || ||| ||| || || |||||||| || | || || || |||| || | || Sbjct 241057 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTACGGCCGTCCTCGAGCTGC 240998 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || ||||| || || | |||||||||||| | || | || || ||||| ||| ||| Sbjct 240997 TTGCCGGCGAAGATGAGACGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGAATCTTC 240938 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 || ||| || | || | |||||||| || || || || | ||||| || || || || Sbjct 240937 TGCTTC-ACGTTCTCGATCGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 240879 Query 33726 TAACGTTTTTACAAAGATCTGCATAGTTGG 33755 | || || || ||||||||||| ||||| Sbjct 240878 GAGGGTCTTCACGAAGATCTGCATTGTTGG 240849 Score = 87.8 bits (96), Expect = 1e-12 Identities = 144/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || || ||| ||| || || |||||||| |||| ||| ||||| |||| || | || Sbjct 241285 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGC 241226 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || ||||| || || | |||||||| || | || | ||| || ||||| ||| || Sbjct 241225 TTGCCGGCGAAGATAAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTGAATCTTT 241166 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 || || | | | || | |||||||| || || || || | ||||| || || || || Sbjct 241165 TGCTTGA-CGTTCTCGATCGTGTCGCTGGACTCGACCTCGAGGGTGATAGTCTTGCCGGT 241107 Query 33726 TAACGTTTTTACAAAGATCTGCATA 33750 | ||| || || |||||||||||| Sbjct 241106 CAGCGTCTTGACGAAGATCTGCATA 241082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328697906752320