Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20castellanii_20[genbank_20GCA_5F000193105.1_202011-03- 22] 1,521 sequences; 46,714,639 total letters Query= NC_027365.1 Length=58076 Score E Sequences producing significant alignments: (Bits) Value seq405 87.8 7e-13 >seq405 Length=129346 Score = 87.8 bits (96), Expect = 7e-13 Identities = 119/161 (74%), Gaps = 4/161 (2%) Strand=Plus/Minus Query 44147 CAAGAACCTGCTCGGTATGCCGTGGCGCGTGGCGCTGGCGCTGCAGGACGACGGCTGGAT 44206 |||| | ||| |||| ||||||||||||||||| | || || |||| ||| |||||| Sbjct 77174 CAAGGATCTGATCGGCTTGCCGTGGCGCGTGGCGTTTGCACTCCAGGCCGATGGCTGGTA 77115 Query 44207 TCTGCGCAACGACGTTGTGTGGCAGAAGCCCAA-CGCGATCCCGCAGTCGAGCCGCGACC 44265 ||| | |||| |||| ||||| |||||||| || | |||| | ||| |||||| Sbjct 77114 CTTGCACTCCGACATTGTCTGGCACAAGCCCAATTGCCAGCCCG-AATCGGTGCGCGACA 77056 Query 44266 GGCTCAC-CGGCCGCTACGAGCACGTGTTCCTGTTCGTCAA 44305 ||| || || ||| ||||| |||| ||| |||| | ||| Sbjct 77055 GGCCGACGCGCGCGC-ACGAGTACGTCTTCTTGTTTGCCAA 77016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 185718245519676