Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20castellanii_20[genbank_20GCA_5F000193105.1_202011-03- 22] 1,521 sequences; 46,714,639 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq1307 123 8e-23 seq414 118 3e-21 seq1445 116 1e-20 seq1223 116 1e-20 seq1225 107 6e-18 seq932 107 6e-18 seq422 107 6e-18 seq638 105 2e-17 seq1224 104 7e-17 seq447 104 7e-17 seq754 87.8 5e-12 seq1356 86.0 2e-11 >seq1307 Length=263854 Score = 123 bits (136), Expect = 8e-23 Identities = 168/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||| ||||| | | || || || |||||||||||||| || || || || || || Sbjct 170549 CATACCGCCACGAAGACGGAGGACGAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTC 170608 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 | | || || || || ||||| || || ||||| ||||| ||||| ||||||||||| Sbjct 170609 GGCGAGGGTGCGACCGTCCTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGATCAGG 170668 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGG-TT 140685 ||||| || || || |||||||| || || || || || || | || | ||| | Sbjct 170669 GGGAATACCCTCCTTGTCCTGAATCTTCTGCTTCACGTTCTCGATGGTGTC-GCTGGACT 170727 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || || || || | ||||| |||||||| || || || || |||||||| Sbjct 170728 CGACCTCGAGGGTGATGGTCTTGCCGGTTAGGGTCTTGACGAAGATCTGCAT 170779 >seq414 Length=771140 Score = 118 bits (130), Expect = 3e-21 Identities = 167/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || || || ||||| ||||| || || || || || || Sbjct 166999 CATACCACCACGGAGGCGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTC 166940 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 | | || || ||||| || || || || ||||| ||||| ||||| |||||||| || Sbjct 166939 GGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCGGG 166880 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGG-TT 140685 |||||| || || || ||||| || || || || || || || | ||| | ||| | Sbjct 166879 AGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTATC-GCTGGACT 166821 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || || || |||| ||||| ||||| || || || || || |||||||| Sbjct 166820 CGACCTCGAGAGTAATCGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 166769 Score = 98.7 bits (108), Expect = 3e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 ||||| || || ||||| ||||| || || || || || || | | || || || || Sbjct 166752 AGAACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCC 166693 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || || ||||| ||||| ||||| ||||||||||| ||||| || || || ||| Sbjct 166692 TCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCAGGGGGAATACCCTCCTTGTCC 166633 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 ||||| || || || || || || | || | || || || || || | ||| Sbjct 166632 TGAATCTTCTGCTTCACGTTCTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTC 166573 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| || || || || || |||||||| Sbjct 166572 TTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 166541 >seq1445 Length=562458 Score = 116 bits (128), Expect = 1e-20 Identities = 167/233 (72%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||| ||||| | | || || || |||||||| ||||| || || || || || || Sbjct 27950 CATACCGCCACGAAGACGGAGGACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTC 27891 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 | | || || || || ||||| || || ||||| ||||| ||||| ||||||||||| Sbjct 27890 GGCGAGGGTGCGACCGTCCTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGATCAGG 27831 Query 140627 AGGAATTCCTTCTTTATCCTGAAT-TTTAGCTTTTACATTATCAATCGAATCAGATGGTT 140685 ||||| || || || |||||||| ||| || || || || || || | || | | Sbjct 27830 GGGAATACCCTCCTTGTCCTGAATCTTTTGC-TTCACGTTCTCGATGGTGTCGCTCGACT 27772 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 | || || || || | ||||| ||||| || || || || || ||||||||| Sbjct 27771 CGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATT 27719 Score = 105 bits (116), Expect = 2e-17 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||| ||||| | | || || || || || || ||||| || || || || || || Sbjct 28178 CATACCGCCACGAAGACGGAGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTC 28119 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 | | || || || || || || || || || || ||||| ||||| ||||||||||| Sbjct 28118 GGCCAGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCAGG 28059 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || || || || ||||| || || || || || ||||||| || || | || Sbjct 28058 GGGGATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCAATCGTGTCGGACGACTC 27999 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || |||| ||||| ||||| || || || || || |||||||| Sbjct 27998 GACCTCGAGAGTAATCGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 27948 >seq1223 Length=762 Score = 116 bits (128), Expect = 1e-20 Identities = 167/233 (72%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||| ||||| | | || || || |||||||| ||||| || || || || || || Sbjct 491 CATACCGCCACGAAGACGGAGGACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTC 550 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 | | || || || || ||||| || || ||||| ||||| ||||| ||||||||||| Sbjct 551 GGCGAGGGTGCGACCGTCCTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGATCAGG 610 Query 140627 AGGAATTCCTTCTTTATCCTGAAT-TTTAGCTTTTACATTATCAATCGAATCAGATGGTT 140685 ||||| || || || |||||||| ||| || || || || || || | || | | Sbjct 611 GGGAATACCCTCCTTGTCCTGAATCTTTTGC-TTCACGTTCTCGATGGTGTCGCTCGACT 669 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 | || || || || | ||||| ||||| || || || || || ||||||||| Sbjct 670 CGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATT 722 Score = 105 bits (116), Expect = 2e-17 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||| ||||| | | || || || || || || ||||| || || || || || || Sbjct 263 CATACCGCCACGAAGACGGAGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTC 322 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 | | || || || || || || || || || || ||||| ||||| ||||||||||| Sbjct 323 GGCCAGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCAGG 382 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || || || || ||||| || || || || || ||||||| || || | || Sbjct 383 GGGGATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCAATCGTGTCGGACGACTC 442 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || |||| ||||| ||||| || || || || || |||||||| Sbjct 443 GACCTCGAGAGTAATCGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 493 >seq1225 Length=780 Score = 107 bits (118), Expect = 6e-18 Identities = 163/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || || || ||||| ||||| || || || || || || Sbjct 634 CATACCACCACGGAGGCGGAGCACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTC 575 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 | | || || || || || || || || || || ||||| ||||| |||||||| || Sbjct 574 GGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCGGG 515 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||| || || || |||||||| || || || || || |||| || | || Sbjct 514 AGGAATACCCTCCTTGTCCTGAATCTTCTGCTTCACGTTCTCGATCGTGTCGCTCGACTC 455 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 || || || || | ||||| ||||| || || || || || ||||||||| Sbjct 454 GACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATT 403 >seq932 Length=1165899 Score = 107 bits (118), Expect = 6e-18 Identities = 165/233 (71%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || || || ||||| || || || || || || || || Sbjct 391037 CATACCACCACGGAGGCGGAGCACGAGGTGGAGAGTCGATTCCTTCTGGATGTTGTAGTC 391096 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 | | || || || || || || || || ||||| ||||| ||||| ||||| ||||| Sbjct 391097 GGCCAGAGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCAGG 391156 Query 140627 AGGAATTCCTTCTTTATCCTGAAT-TTTAGCTTTTACATTATCAATCGAATCAGATGGTT 140685 ||| || ||||| || |||||||| ||| || || || || || || | || | | Sbjct 391157 AGGGATGCCTTCCTTGTCCTGAATCTTTTGC-TTAACGTTCTCGATGGTGTCGCTCGACT 391215 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 | || || || || | ||||| ||||| || || || || || ||||||||| Sbjct 391216 CGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATT 391268 >seq422 Length=916903 Score = 107 bits (118), Expect = 6e-18 Identities = 163/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || || || ||||| ||||| || || || || || || Sbjct 624544 CATACCACCACGGAGGCGGAGCACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTC 624485 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 | | || || || || || || || || || || ||||| ||||| |||||||| || Sbjct 624484 GGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCGGG 624425 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||| || || || |||||||| || || || || || |||| || | || Sbjct 624424 AGGAATACCCTCCTTGTCCTGAATCTTCTGCTTGACGTTCTCGATCGTGTCGCTCGACTC 624365 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 || || || || | ||||| ||||| || || || || || ||||||||| Sbjct 624364 GACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATT 624313 Score = 102 bits (112), Expect = 2e-16 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | ||||| || || ||||| ||||| || || || || || || Sbjct 624772 CATACCACCACGGAGACGAAGAACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTC 624713 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 | | || || || || || || || || ||||| ||||| ||||| ||||| ||||| Sbjct 624712 GGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCAGG 624653 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || || || || ||||| || || || || || || || | || || || Sbjct 624652 GGGGATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTTTCGATGGTGTCCGAGCTCTC 624593 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || | ||||| ||||| || || || || || |||||||| Sbjct 624592 GACCTCGAGGGTGATGGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 624542 Score = 87.8 bits (96), Expect = 5e-12 Identities = 160/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || || || ||||| ||||| || || || || || || Sbjct 210668 CATACCACCACGGAGGCGGAGCACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTC 210727 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 | | || || || || || || || || || || ||||| ||||| ||||| || || Sbjct 210728 GGCGAGCGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGG 210787 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGG-TT 140685 ||||| || || || ||||| || || || || || || || | || | ||| | Sbjct 210788 GGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTC-GCTGGACT 210846 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 |||| || || || | ||||| || || || || || || || || ||||| Sbjct 210847 CAACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATTTGCAT 210898 >seq638 Length=1393837 Score = 105 bits (116), Expect = 2e-17 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || || || || || ||||| || || || || || || Sbjct 262795 CATACCACCACGAAGGCGGAGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTC 262854 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 | | || || || ||||| || || || ||||| ||||| ||||| ||||| ||||| Sbjct 262855 GGCGAGCGTACGGCCGTCTTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCAGG 262914 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || || || || ||||| || || || || || || || | ||| | || Sbjct 262915 GGGGATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTATCGCTCGACTC 262974 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || |||| ||||| ||||| || || || ||||| |||||||| Sbjct 262975 GACCTCGAGAGTAATCGTCTTGCCGGTAAGGGTCTTGACAAAGATCTGCAT 263025 Score = 98.7 bits (108), Expect = 3e-15 Identities = 161/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || || || || || ||||| || || || || || || Sbjct 263023 CATACCACCACGAAGACGGAGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTC 263082 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 | | || || || || || || || ||||| || ||||| ||||| ||||| || || Sbjct 263083 GGCGAGCGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATAAGACGCTGCTGGTCGGG 263142 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||| || ||||| || |||||||| || || || || || || | || | || Sbjct 263143 AGGGATGCCTTCCTTGTCCTGAATCTTCTGCTTCACGTTCTCGATGGTGTCGCTCGACTC 263202 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 || || || || | ||||| ||||| || || || || || ||||||||| Sbjct 263203 GACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCATT 263254 >seq1224 Length=756 Score = 104 bits (114), Expect = 7e-17 Identities = 162/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || || || ||||| ||||| || || || || || || Sbjct 601 CATACCACCACGGAGGCGGAGCACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTC 542 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 | | || || || || || || || || ||||| ||||| ||||| ||||| || || Sbjct 541 GGCGAGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGG 482 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||| || || || ||||| || || || || || || || | || || | || Sbjct 481 AGGAATACCCTCCTTGTCCTGGATCTTCTGCTTGACGTTCTCGATGGTGTCGGACGACTC 422 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 || || || || | ||||| || || || || || || || ||||||||| Sbjct 421 GACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCATT 370 >seq447 Length=587387 Score = 104 bits (114), Expect = 7e-17 Identities = 162/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||| || || | | ||||| || || || || ||||| || || || || || || Sbjct 241085 CATACCGCCGCGCAGACGAAGAACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 241026 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || || || || || || || || ||||| ||||| ||||||||||| Sbjct 241025 AGCAAGAGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCAGG 240966 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||| || || || || |||||||| || || || || || |||| || | || Sbjct 240965 AGGGATGCCCTCCTTGTCCTGAATCTTCTGCTTCACGTTCTCGATCGTGTCGCTCGACTC 240906 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 || || || || | ||||| ||||| || || || || || ||||||||| Sbjct 240905 GACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCATT 240854 Score = 100 bits (110), Expect = 9e-16 Identities = 165/233 (71%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || || || || || ||||| || || || || || || Sbjct 241313 CATACCACCACGAAGACGAAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 241254 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 | | || || || || || || || || || || ||||| || || ||||| || || Sbjct 241253 GGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCGGG 241194 Query 140627 AGGAATTCCTTCTTTATCCTGAAT-TTTAGCTTTTACATTATCAATCGAATCAGATGG-T 140684 |||||| || || || |||||||| ||| || || || || || |||| || | ||| Sbjct 241193 AGGAATACCCTCCTTGTCCTGAATCTTTTGC-TTGACGTTCTCGATCGTGTC-GCTGGAC 241136 Query 140685 TCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || || | ||||| ||||| || || || || || |||||||| Sbjct 241135 TCGACCTCGAGGGTGATAGTCTTGCCGGTCAGCGTCTTGACGAAGATCTGCAT 241083 >seq754 Length=611063 Score = 87.8 bits (96), Expect = 5e-12 Identities = 75/91 (82%), Gaps = 5/91 (5%) Strand=Plus/Plus Query 423765 AGCATGGATGCCCGAGT-GGTCTAAGGGGGCAGACTTAAGATCTGCTGG----CGAAAGC 423819 ||| |||||| |||||| ||||||||| ||||||||||||||||||||| || | Sbjct 230476 AGCCTGGATGGCCGAGTTGGTCTAAGGCGGCAGACTTAAGATCTGCTGGTGTTCGCGCAC 230535 Query 423820 CTCGTGGGTTCAAACCCCACTCCGTGCATTT 423850 | ||||||||||||||||||||| ||| || Sbjct 230536 CGCGTGGGTTCAAACCCCACTCCAGGCAATT 230566 >seq1356 Length=778 Score = 86.0 bits (94), Expect = 2e-11 Identities = 107/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || || || ||||| ||||| || || || || || || Sbjct 219 CATACCACCACGGAGGCGGAGCACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTC 160 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 | | || || || || || || || || || || ||||| ||||| ||||||||||| Sbjct 159 GGCGAGCGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCAGG 100 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTT 140653 ||| || || || || ||||| || || Sbjct 99 AGGGATGCCCTCCTTGTCCTGGATCTT 73 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515224871006363