Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20castellanii_20[genbank_20GCA_5F000193105.1_202011-03- 22] 1,521 sequences; 46,714,639 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq932 125 6e-24 seq422 125 6e-24 seq414 125 6e-24 seq1225 122 8e-23 seq447 122 8e-23 seq1445 116 3e-21 seq1224 116 3e-21 seq1223 116 3e-21 seq1357 107 2e-18 seq1356 107 2e-18 >seq932 Length=1165899 Score = 125 bits (138), Expect = 6e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||||||||||| |||| || || || || || | | Sbjct 390583 ATGCAGATCTTCGTCAAGACGCTGACCGGCAAGACTATCACCCTCGAGGTCGAGTCCAGC 390524 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| |||| || || || || ||||| ||||| || ||||| || |||||||| Sbjct 390523 GACACGATCGAGAACGTGAAGCAGAAGATTCAGGACAAGGAGGGCATCCCTCCCGATCAG 390464 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||||||||| || | || ||| | ||| | |||| |||||| Sbjct 390463 CAGCGCCTTATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTGGCCGACTACAAC 390404 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCA 27216 || || |||||||| || | || | || | ||| |||| || |||| Sbjct 390403 ATCCAGAAGGAGTCCACGCTCCACCTCGTCCTCCGTCTGCGCGGCGGCA 390355 Score = 122 bits (134), Expect = 8e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||||||||||| |||| || || || || || || Sbjct 390811 ATGCAGATCTTCGTCAAGACGCTGACCGGCAAGACTATCACCCTCGAGGTCGAGAGCTCG 390752 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | || || || || || || ||||| || ||||| || || || || Sbjct 390751 GACACGATCGAAAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCGCCTGACCAG 390692 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||||||||| || | |||||| | ||| | |||| |||||| Sbjct 390691 CAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAAGACGGCCGTACCCTGGCCGACTACAAC 390632 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||||||||| | || | ||| | ||| |||| || || || Sbjct 390631 ATCCAGAAGGAGTCGACTCTTCACCTCGTTCTTCGTCTGCGCGGCGGTAT 390582 Score = 122 bits (134), Expect = 8e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||||||||| ||| | || || || || || || ||| Sbjct 391039 ATGCAGATCTTCGTCAAGACTCTGACCGGTAAGACCATCACCCTCGAGGTCGAGAGCTCC 390980 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | || || || || || || ||||| || ||||| || || || || Sbjct 390979 GACACGATCGAAAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCGCCTGACCAG 390920 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||||||||| || | |||||| | ||| | |||| |||||| Sbjct 390919 CAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAAGACGGCCGTACCCTGGCCGACTACAAC 390860 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||||||||| | || | ||| | ||| |||| || || || Sbjct 390859 ATCCAGAAGGAGTCGACTCTTCACCTCGTTCTTCGTCTGCGCGGCGGTAT 390810 Score = 113 bits (124), Expect = 4e-20 Identities = 145/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 26985 GCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCG 27044 || |||||||| || || || || |||||||||||| | || || || || || || || Sbjct 391270 GCAATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTCGAGTCG 391211 Query 27045 TCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGAT 27104 |||| | || |||| || || ||||| ||||| ||||| |||||||| || || || Sbjct 391210 AGCGACACCATCGAGAACGTTAAGCAAAAGATTCAGGACAAGGAAGGCATCCCTCCTGAC 391151 Query 27105 CAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTAC 27164 || |||||| | || | ||| ||||| || | || ||| | || | |||| ||| Sbjct 391150 CAGCAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGCACTCTGGCCGACTAC 391091 Query 27165 AACATTCAAAAGGAGTCGAC 27184 ||||| || ||||| ||||| Sbjct 391090 AACATCCAGAAGGAATCGAC 391071 >seq422 Length=916903 Score = 125 bits (138), Expect = 6e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||||||||||| | || || || || || || || | Sbjct 624314 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTCGAGTCGAGC 624373 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| |||| ||||| || || ||||| ||||| || || || || |||||||| Sbjct 624374 GACACGATCGAGAACGTCAAGCAGAAGATTCAGGACAAGGAGGGTATTCCTCCCGATCAG 624433 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||||||||| || | || ||| | || | |||| |||||| Sbjct 624434 CAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTCGCCGACTACAAC 624493 Query 27168 ATTCAAAAGGAGTCGAC 27184 || || ||||||||||| Sbjct 624494 ATCCAGAAGGAGTCGAC 624510 Score = 116 bits (128), Expect = 3e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||||||||||| |||| || || || || || | | Sbjct 624770 ATGCAGATCTTCGTCAAGACGCTGACCGGCAAGACTATCACCCTCGAGGTAGAGTCCAGC 624829 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| |||| ||||| || || ||||| |||||||| || || || ||||| || Sbjct 624830 GACACGATCGAGAACGTCAAGCAGAAGATTCAGGACAAAGAGGGTATTCCTCCCGACCAG 624889 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | |||||| || || | || ||| | ||| | | || |||||| Sbjct 624890 CAGCGCCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGTACCCTGGCTGACTACAAC 624949 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCA 27216 || || |||||||| || | || | || | ||| | || ||||||| Sbjct 624950 ATCCAGAAGGAGTCCACGCTCCACCTCGTCCTCCGTCTCCGTGGTGGCA 624998 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||||||||| ||| | || || || || || || ||| Sbjct 210670 ATGCAGATCTTCGTCAAGACTCTGACCGGTAAGACGATCACCCTCGAGGTCGAGAGCTCC 210611 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| || || || || || || ||||| || || || || ||||| || Sbjct 210610 GACACCATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGTATTCCCCCCGACCAG 210551 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||||||||| || | || ||| | ||| | |||| |||||| Sbjct 210550 CAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACCCTCGCCGACTACAAC 210491 Query 27168 ATTCAAAAGGAGTCGAC 27184 || || ||||| ||||| Sbjct 210490 ATCCAGAAGGAATCGAC 210474 Score = 100 bits (110), Expect = 2e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || || || || || ||||| |||||| | || || || || || || | Sbjct 210899 CATGCAAATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTTGAGTCCAG 210840 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| | || |||| || || || || || || ||||| || || || || ||||| || Sbjct 210839 CGACACCATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGTATTCCCCCCGACCA 210780 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||||| | || | ||||||||| || | || ||| || || | |||| ||||| Sbjct 210779 GCAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACGCTCGCCGACTACAA 210720 Query 27167 CATTCAAAAGGAGTCGAC 27184 ||| || ||||||||||| Sbjct 210719 CATCCAGAAGGAGTCGAC 210702 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||||||||||||| | || || || || || || || Sbjct 624542 ATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACCATCACCCTCGAGGTCGAGAGCTCG 624601 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || || || || || ||||| || || || || || || || Sbjct 624602 GACACCATCGAAAACGTGAAGCAGAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAG 624661 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||| ||||| || | || ||| | || | |||| |||||| Sbjct 624662 CAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGCACGCTCGCCGACTACAAC 624721 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||||||||| | || | ||| | ||| | || ||||| || Sbjct 624722 ATCCAGAAGGAGTCGACTCTCCACCTCGTTCTTCGTCTCCGTGGTGGTAT 624771 >seq414 Length=771140 Score = 125 bits (138), Expect = 6e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||||||||||||| | || || || || || || || Sbjct 166997 ATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACCATCACCCTCGAGGTCGAGAGCTCG 167056 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | || || || || || || ||||| || ||||| || |||||||| Sbjct 167057 GACACGATCGAAAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCTCCCGATCAG 167116 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||||||||| || | || ||| | || | |||| |||||| Sbjct 167117 CAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGGCGTACTCTGGCCGACTACAAC 167176 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCA 27216 || || ||||||||||| | || | || | ||| |||| ||||||| Sbjct 167177 ATCCAGAAGGAGTCGACTCTCCACCTCGTCCTCCGTCTGCGCGGTGGCA 167225 Score = 123 bits (136), Expect = 2e-23 Identities = 169/236 (72%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 26982 TACGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAA 27041 || ||||||||||| || || || || |||||||||||| | || || || || || || Sbjct 166535 TAGGCCATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTCGAG 166594 Query 27042 CCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCC 27101 || |||| | || |||| || || || || ||||| ||||| || || || || || Sbjct 166595 TCGAGCGACACCATCGAGAACGTGAAGCAGAAGATTCAGGACAAGGAGGGTATTCCCCCT 166654 Query 27102 GATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGAT 27161 ||||| |||||| | || | ||| ||||| || | || ||| | || | |||| Sbjct 166655 GATCAGCAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGCACGCTCGCCGAC 166714 Query 27162 TACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||| || ||||||||||| | || | ||| | ||| |||| || ||||| Sbjct 166715 TACAACATCCAGAAGGAGTCGACTCTCCACCTCGTTCTTCGTCTGCGCGGCGGCAT 166770 Score = 102 bits (112), Expect = 7e-17 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 26984 CGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACC 27043 || ||||||||| || || || || || ||||||||| | |||||||| || || || | Sbjct 166765 CGGCATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACGATTACTCTCGAGGTCGAGTC 166824 Query 27044 GTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGA 27103 ||| | || |||| || || || || || || ||||| || || || || ||||| Sbjct 166825 CAGCGATACCATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGTATTCCTCCCGA 166884 Query 27104 TCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTA 27163 ||| |||||| | || | ||| ||||| || | || || | || | |||| || Sbjct 166885 TCAGCAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTA 166944 Query 27164 CAACATTCAAAAGGAGTCGAC 27184 |||||| || ||||||||||| Sbjct 166945 CAACATCCAGAAGGAGTCGAC 166965 >seq1225 Length=780 Score = 122 bits (134), Expect = 8e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||||||||||| | || || || || || || || | Sbjct 404 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTCGAGTCGAGC 463 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| |||| || || || || ||||| ||||| || || || || |||||||| Sbjct 464 GACACGATCGAGAACGTGAAGCAGAAGATTCAGGACAAGGAGGGTATTCCTCCCGATCAG 523 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||||||||| || | || ||| | || | |||| |||||| Sbjct 524 CAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTCGCCGACTACAAC 583 Query 27168 ATTCAAAAGGAGTCGAC 27184 || || ||||||||||| Sbjct 584 ATCCAGAAGGAGTCGAC 600 >seq447 Length=587387 Score = 122 bits (134), Expect = 8e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||||||||||| |||| || || || || || | | Sbjct 241083 ATGCAGATCTTCGTCAAGACGCTGACCGGCAAGACTATCACCCTCGAGGTCGAGTCCAGC 241142 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| |||| ||||| ||||| ||||| ||||| || || || || ||||| || Sbjct 241143 GACACGATCGAGAACGTCAAGCAAAAGATTCAGGACAAGGAGGGTATTCCTCCCGACCAG 241202 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||||||||| || | || ||| | || | |||| |||||| Sbjct 241203 CAGCGCCTTATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTCGCCGACTACAAC 241262 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||| ||| | || | || | ||| | || ||||| || Sbjct 241263 ATCCAGAAGGAGTCCACCCTCCACCTCGTCCTTCGTCTTCGTGGTGGTAT 241312 >seq1445 Length=562458 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||||||||||| | || || || || || || || | Sbjct 27720 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTCGAGTCGAGC 27779 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| || || ||||| ||||| ||||| || || || || || ||||| Sbjct 27780 GACACCATCGAGAACGTGAAGCAAAAGATTCAGGACAAGGAGGGTATTCCCCCTGATCAG 27839 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||| || || || | || ||| || ||| | |||| |||||| Sbjct 27840 CAGCGTCTCATCTTCGCTGGTAAGCAGCTTGAGGACGGTCGCACCCTCGCCGACTACAAC 27899 Query 27168 ATTCAAAAGGAGTCGAC 27184 || || ||||||||||| Sbjct 27900 ATCCAGAAGGAGTCGAC 27916 >seq1224 Length=756 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || ||||| |||||| | || || || || || || ||||| Sbjct 371 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTCGAGTCGTCC 430 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| ||||| || || || || ||||| || || || || ||||| || Sbjct 431 GACACCATCGAGAACGTCAAGCAGAAGATCCAGGACAAGGAGGGTATTCCTCCCGACCAG 490 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||| ||||| || | || ||| | ||| | |||| |||||| Sbjct 491 CAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGTACCCTCGCCGACTACAAC 550 Query 27168 ATTCAAAAGGAGTCGAC 27184 || || ||||||||||| Sbjct 551 ATCCAGAAGGAGTCGAC 567 >seq1223 Length=762 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||||||||||| | || || || || || || || | Sbjct 721 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTCGAGTCGAGC 662 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| || || ||||| ||||| ||||| || || || || || ||||| Sbjct 661 GACACCATCGAGAACGTGAAGCAAAAGATTCAGGACAAGGAGGGTATTCCCCCTGATCAG 602 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||| || || || | || ||| || ||| | |||| |||||| Sbjct 601 CAGCGTCTCATCTTCGCTGGTAAGCAGCTTGAGGACGGTCGCACCCTCGCCGACTACAAC 542 Query 27168 ATTCAAAAGGAGTCGAC 27184 || || ||||||||||| Sbjct 541 ATCCAGAAGGAGTCGAC 525 >seq1357 Length=817 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||||||||| ||| | || || || || || || ||| Sbjct 197 ATGCAGATCTTCGTCAAGACTCTGACCGGTAAGACGATCACCCTCGAGGTCGAGAGCTCC 256 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| || || || || || || ||||| || || || || ||||| || Sbjct 257 GACACCATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGTATTCCCCCCGACCAG 316 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||||||||| || | || ||| | ||| | |||| |||||| Sbjct 317 CAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACCCTCGCCGACTACAAC 376 Query 27168 ATTCAAAAGGAGTCGAC 27184 || || ||||| ||||| Sbjct 377 ATCCAGAAGGAATCGAC 393 >seq1356 Length=778 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||||||||| ||| | || || || || || || ||| Sbjct 217 ATGCAGATCTTCGTCAAGACTCTGACCGGTAAGACGATCACCCTCGAGGTCGAGAGCTCC 276 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| || || || || || || ||||| || || || || ||||| || Sbjct 277 GACACCATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGTATTCCCCCCGACCAG 336 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||||||||| || | || ||| | ||| | |||| |||||| Sbjct 337 CAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACCCTCGCCGACTACAAC 396 Query 27168 ATTCAAAAGGAGTCGAC 27184 || || ||||| ||||| Sbjct 397 ATCCAGAAGGAATCGAC 413 Score = 100 bits (110), Expect = 2e-16 Identities = 133/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 27000 GTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAG 27059 || || || ||||| |||||| | || || || || || || |||||| | || ||| Sbjct 1 GTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTCGAGAGCTCCGACACCATCGAG 60 Query 27060 ATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATA 27119 | || || || || || || ||||| || ||||| || || ||||| |||||| | || Sbjct 61 AACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCTCCTGATCAGCAGCGTCTCATC 120 Query 27120 TACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAG 27179 | ||||||||| || | || ||| || || | |||| |||||||| || |||||| Sbjct 121 TTCGCCGGCAAGCAGCTCGAGGACGGTCGCACGCTCGCCGACTACAACATCCAGAAGGAG 180 Query 27180 TCGAC 27184 ||||| Sbjct 181 TCGAC 185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434910131113920