Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20castellanii_20[genbank_20GCA_5F000193105.1_202011-03- 22] 1,521 sequences; 46,714,639 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq638 114 1e-20 seq447 114 1e-20 seq422 114 1e-20 seq1307 105 6e-18 seq1225 104 2e-17 seq1224 104 2e-17 seq414 98.7 9e-16 seq1445 96.9 3e-15 seq1223 96.9 3e-15 seq932 93.3 4e-14 seq1357 87.8 2e-12 seq1356 87.8 2e-12 seq623 82.4 7e-11 >seq638 Length=1393837 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || |||||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 262823 TGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCGTCTTCGAGCTGC 262882 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || |||||||||||||| | ||| | | ||| |||||| ||| ||| Sbjct 262883 TTGCCAGCGAAGATGAGACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTC 262942 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || || | || | | |||||||||||||| || || | || || | || || || Sbjct 262943 TGCTTCACGTTCTCGATGGTATCGCTCGACTCGACCTCGAGAGTAATCGTCTTGCCGGTA 263002 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || |||||||| ||||| Sbjct 263003 AGGGTCTTGACAAAGATCTGCAT 263025 Score = 105 bits (116), Expect = 6e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || |||||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 263051 TGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGC 263110 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 || || || || ||||||||||||||||||| || | || || |||||| || ||| Sbjct 263111 TTTCCGGCGAAGATAAGACGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGAATCTTC 263170 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || || | || | | || ||||||||||| || || | ||||| | || || || Sbjct 263171 TGCTTCACGTTCTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGTG 263230 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||| ||||| Sbjct 263231 AGGGTCTTCACGAAGATCTGCAT 263253 Score = 93.3 bits (102), Expect = 4e-14 Identities = 145/206 (70%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 262595 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGC 262654 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || || ||||||||||||| || | || ||| |||||| ||| ||| Sbjct 262655 TTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTC 262714 Query 39202 TGTTTGAGCGTCGCCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCCC 39258 || || | || | | ||| || ||| ||| || || | ||||| | || || Sbjct 262715 TGCTTCACATTCTCGATCGTGTCCGAGCT---CTCGACCTCGAGGGTGATCGTCTTACCG 262771 Query 39259 GTCAGCGTTTTAACAAAGATTTGCAT 39284 |||||||| || || ||||| ||||| Sbjct 262772 GTCAGCGTCTTGACGAAGATCTGCAT 262797 >seq447 Length=587387 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 241285 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGC 241226 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || ||||| ||||||||||||| || | | ||| |||||| || || Sbjct 241225 TTGCCGGCGAAGATAAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTGAATCTTT 241166 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || |||| || | | ||| ||||| ||||| || || | |||||| | || || ||| Sbjct 241165 TGCTTGACGTTCTCGATCGTGTCGCTGGACTCGACCTCGAGGGTGATAGTCTTGCCGGTC 241106 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 ||||| || || ||||| ||||| Sbjct 241105 AGCGTCTTGACGAAGATCTGCAT 241083 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || || ||||| || || |||| || ||||| Sbjct 241057 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTACGGCCGTCCTCGAGCTGC 240998 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || ||||||||||| || | || | || ||| |||||| || ||| Sbjct 240997 TTGCCGGCGAAGATGAGACGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGAATCTTC 240938 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || || | || | | ||| ||||||||||| || || | ||||| | || || || Sbjct 240937 TGCTTCACGTTCTCGATCGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGTG 240878 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||| ||||| Sbjct 240877 AGGGTCTTCACGAAGATCTGCAT 240855 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 241513 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGAGTACGGCCGTCCTCGAGCTGC 241454 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || |||||||||||||| | || | | ||| |||||| ||| ||| Sbjct 241453 TTGCCAGCGAAGATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGGATCTTC 241394 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || || | || | | ||| ||| |||||| || || | ||||| | || ||||| Sbjct 241393 TGCTTCACGTTCTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTACCCGTG 241334 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||| ||||| Sbjct 241333 AGGGTCTTGACGAAGATCTGCAT 241311 >seq422 Length=916903 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || |||||| ||| || || || || || || || || || || |||| || ||||| Sbjct 624972 TGGAGCGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTACGGCCGTCCTCGAGCTGC 624913 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 || || || || || || ||||||||||||| || | | |||||||||| || ||| Sbjct 624912 TTTCCGGCGAAGATGAGGCGCTGCTGGTCGGGAGGAATACCCTCTTTGTCCTGAATCTTC 624853 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || |||| || | | ||| ||||| ||||| || || | |||||| | || || ||| Sbjct 624852 TGCTTGACGTTCTCGATCGTGTCGCTGGACTCTACCTCGAGGGTGATAGTCTTGCCGGTC 624793 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 ||||| || || ||||| ||||| Sbjct 624792 AGCGTCTTGACGAAGATCTGCAT 624770 Score = 113 bits (124), Expect = 4e-20 Identities = 142/195 (73%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| ||||| || || Sbjct 210707 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAA 210766 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || |||||||||||||||| ||| | | ||| |||||| ||| ||||| || | | Sbjct 210767 GATGAGACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 210826 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | || ||||| ||||| || || | ||||| | || || ||||| || || || Sbjct 210827 CTCGATGGTGTCGCTGGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCAC 210886 Query 39273 AAAGATTTGCATCTT 39287 ||||||||||| || Sbjct 210887 GAAGATTTGCATGTT 210901 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| ||||| || || Sbjct 624505 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 624446 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || ||||||||||| |||| || | | ||| |||||| || ||||| |||| | Sbjct 624445 GATGAGACGCTGCTGATCGGGAGGAATACCCTCCTTGTCCTGAATCTTCTGCTTGACGTT 624386 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | ||| ||||||||||| || || | ||||| | || || ||||| || || || Sbjct 624385 CTCGATCGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 624326 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 624325 GAAGATCTGCAT 624314 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 39094 TCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAAT 39153 || || || || || || ||||| || || || |||| || ||||| ||||| || || Sbjct 210480 TCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAG 210539 Query 39154 ATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTC 39213 || |||||||||||||||| ||| | | ||| |||||| ||| ||||| || | || Sbjct 210540 ATGAGACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTC 210599 Query 39214 GCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACA 39273 | | || ||| ||| || || | ||||| | || || ||||| || || || Sbjct 210600 TCGATGGTGTCGGAGCTCTCGACCTCGAGGGTGATCGTCTTACCGGTCAGAGTCTTGACG 210659 Query 39274 AAGATTTGCAT 39284 ||||| ||||| Sbjct 210660 AAGATCTGCAT 210670 >seq1307 Length=263854 Score = 105 bits (116), Expect = 6e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 170121 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGC 170180 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || |||||||||||||| | ||| | | ||| |||||| ||| ||| Sbjct 170181 TTGCCAGCGAAGATGAGACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTC 170240 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || || | || | | ||| ||| |||||| || || | ||||| | || || ||| Sbjct 170241 TGCTTCACGTTCTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCAGTC 170300 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||| ||||| Sbjct 170301 AGGGTCTTGACGAAGATCTGCAT 170323 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 170349 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGAGTACGGCCGTCCTCGAGCTGC 170408 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || ||||||||||| |||| || | || ||| |||||| ||| ||| Sbjct 170409 TTGCCGGCGAAGATGAGACGCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTGGATCTTC 170468 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || || | | | | || || |||||| || || | ||||| | || ||||| Sbjct 170469 TGCTTCACGTTTTCGATGGTGTCCGACGACTCGACCTCGAGGGTGATCGTCTTACCCGTG 170528 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||| ||||| Sbjct 170529 AGGGTCTTGACGAAGATCTGCAT 170551 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| |||||||| || || || || Sbjct 170588 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCGTCCTCAAGCTGCTTACCAGCGAA 170647 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || ||||||||||| || | ||| | | ||| |||||| || ||||| || | | Sbjct 170648 GATGAGACGCTGCTGATCAGGGGGAATACCCTCCTTGTCCTGAATCTTCTGCTTCACGTT 170707 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | || ||||| ||||| || || | ||||| | || || || || || || || Sbjct 170708 CTCGATGGTGTCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTTAGGGTCTTGAC 170767 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 170768 GAAGATCTGCAT 170779 >seq1225 Length=780 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| ||||| || || Sbjct 595 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 536 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || ||||||||||| |||| || | | ||| |||||| || ||||| || | | Sbjct 535 GATGAGACGCTGCTGATCGGGAGGAATACCCTCCTTGTCCTGAATCTTCTGCTTCACGTT 476 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | ||| ||||||||||| || || | ||||| | || || ||||| || || || Sbjct 475 CTCGATCGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 416 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 415 GAAGATCTGCAT 404 >seq1224 Length=756 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| ||||| || || Sbjct 562 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAA 503 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || |||||||||||||||| || | | ||| |||||| ||| ||||| |||| | Sbjct 502 GATGAGACGCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTGGATCTTCTGCTTGACGTT 443 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | || ||| |||||| || || | ||||| | || || ||||| || || || Sbjct 442 CTCGATGGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCAC 383 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 382 GAAGATCTGCAT 371 Score = 89.7 bits (98), Expect = 4e-13 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 39128 CGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTT 39187 |||| || ||||| ||||| || || || |||||||||||||| | ||| | | ||| | Sbjct 755 CGTCTTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCAGGGGGAATACCCTCCT 696 Query 39188 TGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGA 39247 ||||| ||| ||||| || | || | | |||||||| ||||| || || | |||| Sbjct 695 TGTCCTGGATCTTCTGCTTCACGTTCTCAATGGTATCGCTGGACTCGACCTCGAGGGTGA 636 Query 39248 TACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | | || || || || || || || ||||| ||||| Sbjct 635 TCGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 599 >seq414 Length=771140 Score = 98.7 bits (108), Expect = 9e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| ||||| || || Sbjct 166732 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAA 166673 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || ||||||||||| || | ||| | | ||| |||||| || ||||| || | | Sbjct 166672 GATGAGACGCTGCTGATCAGGGGGAATACCCTCCTTGTCCTGAATCTTCTGCTTCACGTT 166613 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | || ||||||||||| || || | ||||| | || || ||||| || || || Sbjct 166612 CTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTGAC 166553 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 166552 GAAGATCTGCAT 166541 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || | || || ||||| ||||| || || Sbjct 166960 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAA 166901 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || ||||||||||| |||| || | | ||| |||||| ||| ||||| || | | Sbjct 166900 GATGAGACGCTGCTGATCGGGAGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 166841 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | |||||||| ||||| || || | || || | || || || || || || || Sbjct 166840 CTCGATGGTATCGCTGGACTCGACCTCGAGAGTAATCGTCTTGCCGGTGAGGGTCTTGAC 166781 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 166780 GAAGATCTGCAT 166769 Score = 82.4 bits (90), Expect = 7e-11 Identities = 136/195 (70%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| ||||| || || Sbjct 167188 CTCCTTCTGGATGTTGTAGTCGGCCAGAGTACGCCCGTCCTCGAGCTGCTTGCCGGCGAA 167129 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || ||||||||||| |||| || | || ||| |||||| ||| ||||| || | | Sbjct 167128 GATGAGACGCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 167069 Query 39213 CGCCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTT 39269 | | ||| || ||| ||| || || | ||||| | || || ||||| || || Sbjct 167068 TTCGATCGTGTCCGAGCT---CTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGAGTCTT 167012 Query 39270 AACAAAGATTTGCAT 39284 || ||||| ||||| Sbjct 167011 GACGAAGATCTGCAT 166997 >seq1445 Length=562458 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || |||||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 28150 TGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGAGTGCGGCCGTCCTCGAGCTGC 28091 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || ||||||||||| || | ||| | | ||| |||||| ||| ||| Sbjct 28090 TTGCCGGCGAAGATGAGACGCTGCTGATCAGGGGGGATACCCTCCTTGTCCTGGATCTTC 28031 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || || | || | | ||| ||| |||||| || || | || || | || || || Sbjct 28030 TGCTTCACGTTCTCAATCGTGTCGGACGACTCGACCTCGAGAGTAATCGTCTTGCCGGTG 27971 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||| ||||| Sbjct 27970 AGGGTCTTGACGAAGATCTGCAT 27948 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| |||||||| || || || || Sbjct 27911 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCGTCCTCAAGCTGCTTACCAGCGAA 27852 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || ||||||||||| || | ||| | | ||| |||||| || || || || | | Sbjct 27851 GATGAGACGCTGCTGATCAGGGGGAATACCCTCCTTGTCCTGAATCTTTTGCTTCACGTT 27792 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | || ||||||||||| || || | ||||| | || || ||||| || || || Sbjct 27791 CTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 27732 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 27731 GAAGATCTGCAT 27720 >seq1223 Length=762 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || |||||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 291 TGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGAGTGCGGCCGTCCTCGAGCTGC 350 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || ||||||||||| || | ||| | | ||| |||||| ||| ||| Sbjct 351 TTGCCGGCGAAGATGAGACGCTGCTGATCAGGGGGGATACCCTCCTTGTCCTGGATCTTC 410 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || || | || | | ||| ||| |||||| || || | || || | || || || Sbjct 411 TGCTTCACGTTCTCAATCGTGTCGGACGACTCGACCTCGAGAGTAATCGTCTTGCCGGTG 470 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||| ||||| Sbjct 471 AGGGTCTTGACGAAGATCTGCAT 493 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| |||||||| || || || || Sbjct 530 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCGTCCTCAAGCTGCTTACCAGCGAA 589 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || ||||||||||| || | ||| | | ||| |||||| || || || || | | Sbjct 590 GATGAGACGCTGCTGATCAGGGGGAATACCCTCCTTGTCCTGAATCTTTTGCTTCACGTT 649 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | || ||||||||||| || || | ||||| | || || ||||| || || || Sbjct 650 CTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 709 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 710 GAAGATCTGCAT 721 >seq932 Length=1165899 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 39094 TCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAAT 39153 || || || || || || ||||| || || || |||| || ||||| ||||| || || Sbjct 391077 TCCTTCTGGATGTTGTAGTCGGCCAGAGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAG 391136 Query 39154 ATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTC 39213 || |||||||||||||| | || | || || |||||| || || || || | || Sbjct 391137 ATGAGACGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGAATCTTTTGCTTAACGTTC 391196 Query 39214 GCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACA 39273 | | || ||||||||||| || || | ||||| | || || ||||| || || || Sbjct 391197 TCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACG 391256 Query 39274 AAGATTTGCAT 39284 ||||| ||||| Sbjct 391257 AAGATCTGCAT 391267 Score = 91.5 bits (100), Expect = 1e-13 Identities = 138/195 (71%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| ||||| || || Sbjct 390620 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCTTCGAGCTGCTTGCCGGCGAA 390679 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || |||||||||||||| | || | || ||| |||||| ||| ||||| || | | Sbjct 390680 GATGAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 390739 Query 39213 CGCCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTT 39269 | | ||| || ||| ||| || || | |||||| | || || |||||||| || Sbjct 390740 TTCGATCGTGTCCGAGCT---CTCGACCTCGAGGGTGATAGTCTTGCCGGTCAGCGTCTT 390796 Query 39270 AACAAAGATTTGCAT 39284 || ||||| ||||| Sbjct 390797 GACGAAGATCTGCAT 390811 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| ||||| || || Sbjct 390848 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCTTCGAGCTGCTTGCCGGCGAA 390907 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || |||||||||||||| | || | || ||| |||||| ||| ||||| || | | Sbjct 390908 GATGAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 390967 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | ||| ||| ||| || || | ||||| | || || ||||| || || || Sbjct 390968 TTCGATCGTGTCGGAGCTCTCGACCTCGAGGGTGATGGTCTTACCGGTCAGAGTCTTGAC 391027 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 391028 GAAGATCTGCAT 391039 >seq1357 Length=817 Score = 87.8 bits (96), Expect = 2e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| ||||| || || Sbjct 160 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAA 101 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || |||||||||||||||| ||| | | ||| |||||| ||| ||||| || | | Sbjct 100 GATGAGACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 41 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGAT 39248 | | | || ||||| ||||| || || | ||||| Sbjct 40 CTCGATGGTGTCGCTGGACTCAACCTCGAGGGTGAT 5 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 39094 TCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAAT 39153 || || || || || || ||||| || || || |||| || ||||| ||||| || || Sbjct 387 TCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAG 328 Query 39154 ATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTC 39213 || |||||||||||||||| ||| | | ||| |||||| ||| ||||| || | || Sbjct 327 ATGAGACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTC 268 Query 39214 GCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACA 39273 | | || ||| ||| || || | ||||| | || || ||||| || || || Sbjct 267 TCGATGGTGTCGGAGCTCTCGACCTCGAGGGTGATCGTCTTACCGGTCAGAGTCTTGACG 208 Query 39274 AAGATTTGCAT 39284 ||||| ||||| Sbjct 207 AAGATCTGCAT 197 >seq1356 Length=778 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 39094 TCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAAT 39153 || || || || || || ||||| || || || |||| || ||||| ||||| || || Sbjct 407 TCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAG 348 Query 39154 ATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTC 39213 || |||||||||||||||| ||| | | ||| |||||| ||| ||||| || | || Sbjct 347 ATGAGACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTC 288 Query 39214 GCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACA 39273 | | || ||| ||| || || | ||||| | || || ||||| || || || Sbjct 287 TCGATGGTGTCGGAGCTCTCGACCTCGAGGGTGATCGTCTTACCGGTCAGAGTCTTGACG 228 Query 39274 AAGATTTGCAT 39284 ||||| ||||| Sbjct 227 AAGATCTGCAT 217 >seq623 Length=316623 Score = 82.4 bits (90), Expect = 7e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 68363 TGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGC 68422 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || |||||||||||||||| || | || ||| |||||| ||| ||| Sbjct 68423 TTGCCAGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTC 68482 Query 39202 TGTTT 39206 || || Sbjct 68483 TGCTT 68487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429537637432673