Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20castellanii_20[genbank_20GCA_5F000826485.1_202015-01- 07] 221,748 sequences; 115,049,889 total letters Query= NC_005261.2 Length=137821 Score E Sequences producing significant alignments: (Bits) Value seq182565 107 2e-18 >seq182565 Length=5737 Score = 107 bits (118), Expect = 2e-18 Identities = 152/212 (72%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 99555 CGAGGTGTTGAGCAGCAGCACGCCGCGGCGCGCCCAGGCCTCCAGGCAGCCGTGCTGCGG 99614 || || |||||| ||||| |||||||| ||||||| | ||||||||||| | || Sbjct 4333 CGTGGCGTTGAGGAGCAGGACGCCGCGCTGCGCCCACTCGGTGAGGCAGCCGTGGTTGGG 4274 Query 99615 CCGCGGGGTC--CCGGGGAAGTTCTTCTGCACGGCCGCGTAGATGTTCTGGAGGCTGGGC 99672 |||| | | ||||||| | | || | | |||||||| |||| |||| |||| Sbjct 4273 --GCGGCGCCAGCCGGGGATGCTGCGCTCGAGCTCGGCGTAGATCTTCTTGAGGGAGGGC 4216 Query 99673 GGGATCGGAACGCCGCGGTTCACGCTGAAGGCCAGGCCGTGGGCCTGCCCGTGGCTGTGG 99732 || | || ||||| ||| |||| ||||| |||||||||||||| | | || | Sbjct 4215 GGCACCGCCACGCCCCGGGTCACCGAGAAGGAGAGGCCGTGGGCCTGGTTCTCGTTGAAG 4156 Query 99733 TAGGGGTCCTGGCCCAGGATGACGACCTTGAC 99764 || |||||||| |||||||| || ||||| || Sbjct 4155 TACGGGTCCTGCCCCAGGATCACCACCTTCAC 4124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 439677093552480