Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20castellanii_20[genbank_20GCA_5F000826485.1_202015-01- 07] 221,748 sequences; 115,049,889 total letters Query= NC_008348.1 Length=168041 Score E Sequences producing significant alignments: (Bits) Value seq215017 82.4 8e-11 >seq215017 Length=6979 Score = 82.4 bits (90), Expect = 8e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 127544 CACGGGTTACACGTGCACGAGTTCGGCGACACGTCGAACGGTTGCACGTCGGCGGGGGAA 127603 ||||| || ||||| |||||||||||||||| | ||||| ||| | ||||| | Sbjct 2651 CACGGCTTCCACGTCCACGAGTTCGGCGACAACACCAACGGCTGCGTGAGCGCGGGCGGC 2592 Query 127604 CACTTCAATCCCACCGGTATGGATCACGGAGCGCCCAACGCGCTCGTTCGTCACGTTGGC 127663 |||||||| ||| ||||| | | ||||| | ||| | | | |||||||||||| Sbjct 2591 CACTTCAACCCCTTCGGTAAGAAGCACGGTGGACCCGAGGATGAGGAGCGTCACGTTGGC 2532 Query 127664 GACCTGGGCAACGTGGAGGC 127683 || || |||||||| | ||| Sbjct 2531 GATCTCGGCAACGTCGTGGC 2512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 536113044570080