Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20comandoni_20[genbank_20GCA_5F002025285.1_202017-03- 13] 57,594 sequences; 86,214,659 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq48723 129 4e-25 seq4039 118 8e-22 seq3581 113 3e-20 seq37207 107 1e-18 seq23100 104 2e-17 seq16312 104 2e-17 seq21914 100 2e-16 seq2 100 2e-16 seq20128 98.7 8e-16 seq30220 96.9 3e-15 seq50001 95.1 9e-15 seq17585 95.1 9e-15 seq49259 89.7 4e-13 seq29893 89.7 4e-13 seq2942 87.8 1e-12 seq49354 86.0 5e-12 seq6315 86.0 5e-12 seq37486 84.2 2e-11 seq23330 84.2 2e-11 seq23136 84.2 2e-11 seq25074 82.4 6e-11 seq21227 82.4 6e-11 >seq48723 Length=522 Score = 129 bits (142), Expect = 4e-25 Identities = 169/234 (72%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 18092 TTGTTATCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTA 18151 ||||| |||||| || ||||| || |||| ||||| || ||||| ||||| |||||||| Sbjct 277 TTGTTGTCCTCCACGCAGTCTGAGCACCAAATGAAGAGTGGATTCCTTTTGGATGTTGTA 336 Query 18152 GTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATC 18211 ||| || | || | |||||| | || ||||| || ||||||| | |||||||| Sbjct 337 GTCTGCAAGAGTGCGGCCATCTTCAAGCTGCTTGCCAGCGAAGATAAGGCGCTGTTGATC 396 Query 18212 CACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGG 18271 ||| | ||| |||||||| ||| | |||||||| | | ||| || |||| || Sbjct 397 AGGGGGAATGCCCTCCTTATCTTGAATCTTCTGCTTGACGTTTTCAATAGAGTCAGAGGA 456 Query 18272 CTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || || | ||| ||| | || || ||||| ||||||||||| || ||||| Sbjct 457 TTCCACCTCGAGGGTAATGGTCTTTCCAGTCAAAGTTTTTACAAAGATCTGCAT 510 >seq4039 Length=8492 Score = 118 bits (130), Expect = 8e-22 Identities = 167/235 (71%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 18092 TTGTTATCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTA 18151 ||||| |||||| || ||||| || |||| ||||| || ||||| ||||| |||||||| Sbjct 7321 TTGTTGTCCTCCACGCAGTCTGAGCACCAAATGAAGAGTGGATTCCTTTTGGATGTTGTA 7262 Query 18152 GTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATC 18211 ||| || | || | |||||| | || ||||| ||| |||| | | ||| ||||| Sbjct 7261 GTCTGCAAGAGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAGATCAAACGTTGCTGATC 7202 Query 18212 CACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGG 18271 ||| | ||| ||||| || || | ||||||||| | | ||| || |||| || Sbjct 7201 AGGGGGAATGCCCTCCTTGTCCTGGATCTTTTGCTTGACGTTTTCAATAGAGTCAGAGGA 7142 Query 18272 CTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 || || | ||||||| | || || ||||| || || || || ||||||||| Sbjct 7141 TTCCACCTCGAGGGTGATGGTCTTTCCAGTCAAAGTCTTCACGAAGATTTGCATT 7087 >seq3581 Length=10373 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || |||| || | ||| |||| |||||| || ||||| || |||||||||||||| ||| Sbjct 5268 CCACCCCTCAGACGAAGGACCAAGTGAAGGGTAGATTCCTTCTGAATGTTGTAGTCAGCC 5209 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || | ||| || | || ||||| ||| |||| || | ||| ||||| || Sbjct 5208 AAGGTACGGCCATCCTCGAGCTGCTTGCCTGCAAAGATCAGACGTTGCTGATCAGGTGGG 5149 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | ||| |||||||| ||| | ||||| || | | ||| | ||| || |||| Sbjct 5148 ATGCCCTCCTTATCCTGAATCTTCTGCTTCACATTTTCAATGGAATCAGAGGACTCGACC 5089 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||| ||||||| | ||||| ||||| || || ||||| || ||||| Sbjct 5088 TCAAGGGTGATGGTCTTGCCAGTCAAGGTCTTGACAAAGATCTGCAT 5042 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||||| || | ||| |||| || || || || || ||||| ||||||||||||||| Sbjct 5040 CCTCCCCTAAGGCGAAGCACCAAATGGAGGGTAGACTCCTTTTGGATGTTGTAGTCGGCC 4981 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || | || || | || ||||| || |||| | | |||||| || ||| Sbjct 4980 AAGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAAACGTTGTTGGTCAGGGGGA 4921 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | ||| ||||| || ||| | |||||||| | | | | |||| || |||| Sbjct 4920 ATGCCCTCCTTGTCCTGAATCTTCTGCTTGACGTTCTCGATCGAGTCAGAGGACTCGACC 4861 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||| |||||| | ||||| ||||| || || || ||||| ||||| Sbjct 4860 TCAAGGGTGATAGTCTTGCCAGTCAAGGTCTTGACGAAAATCTGCAT 4814 >seq37207 Length=701 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||| || | ||| || |||| |||||| || || || ||||| ||||||||||| ||| Sbjct 337 CCTCCACGCAATCTGAGCACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGCC 396 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || | ||| || | || ||||| ||| ||||||| | |||||| || || Sbjct 397 AGCGTGCGGCCATCCTCGAGCTGCTTGCCTGCAAAGATAAGACGTTGTTGGTCAGGTGGG 456 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | ||| ||||| || || | |||||| || | ||| || |||| | ||| | Sbjct 457 ATGCCCTCCTTGTCCTGGATCTTTTGCTTCACATTCTCAATAGAGTCAGAGCTCTCAACT 516 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || | ||||||| | ||||| ||||| || || ||||| || ||||| Sbjct 517 TCCAAGGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 563 >seq23100 Length=704 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||||| || | ||| |||| |||||| || ||||| || || ||||||||||| ||| Sbjct 563 CCTCCCCTCAGGCGAAGCACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAGTCAGCC 504 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || | ||| || | || ||||| || |||| || | |||||||| ||| Sbjct 503 AGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGTTGATCAGGGGGA 444 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | ||| |||||||| ||| | ||||||||| | ||| || |||| | ||| Sbjct 443 ATGCCCTCCTTATCTTGAATCTTTTGCTTGACGTTCTCAATAGAGTCAGAGCTCTCAACC 384 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328 || | ||| || | || || ||||| || || ||||| |||||||| || Sbjct 383 TCGAGGGTAATTGTCTTTCCAGTCAAAGTCTTCACAAAGATTTGCATGTT 334 >seq16312 Length=2383 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||||| || | ||| |||| ||| || || ||||| ||||||||||||||||| || Sbjct 2082 CCTCCCCTCAGACGAAGGACCAAGTGGAGGGTAGATTCCTTTTGAATGTTGTAGTCAGCG 2023 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || | ||| |||| |||||||| ||| |||| || | || ||||| || Sbjct 2022 AGGGTGCGGCCATCCTCCAGCTGTTTGCCTGCAAAGATGAGACGCTGCTGATCAGGTGGG 1963 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | ||| ||||| || ||| | ||||| || | | ||| || |||| || || Sbjct 1962 ATGCCCTCCTTGTCTTGAATCTTCTGCTTCACGTTTTCAATAGAGTCAGAGGATTCCACC 1903 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328 || | ||||||| | || || ||||| || || || || |||||||| || Sbjct 1902 TCGAGGGTGATGGTCTTTCCAGTCAAAGTCTTCACGAAGATTTGCATGTT 1853 >seq21914 Length=1598 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 18113 AAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATC 18172 ||| |||| |||||| || ||||| || || ||||| ||||| || | || | ||| Sbjct 376 AAGCACCAAGTGAAGGGTAGATTCCTTCTGGATGTTATAGTCAGCAAGGGTGCGGCCATC 317 Query 18173 TTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC 18232 |||| |||||||| ||| |||| | | ||| ||||| || | ||| ||||| || Sbjct 316 CTCCAGCTGTTTGCCTGCAAAGATCAAACGTTGCTGATCAGGTGGGATGCCCTCCTTGTC 257 Query 18233 GGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCT 18292 || | |||||||| | | | | | |||| | |||| ||| | ||||||| | Sbjct 256 CTGGATCTTCTGCTTGACGTTTTCGATTGAGTCAGAGCTCTCGACTTCGAGGGTGATGGT 197 Query 18293 TTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||||||||||| || || ||||| |||||||| Sbjct 196 CTTGCCGGTCAAGGTCTTCACAAAGATTTGCAT 164 >seq2 Length=13225 Score = 100 bits (110), Expect = 2e-16 Identities = 171/247 (69%), Gaps = 2/247 (1%) Strand=Plus/Plus Query 18081 ACATTTTCTTT--TTGTTATCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTT 18138 |||||||| || ||||| |||||| || | ||| || |||| || || || || || | Sbjct 12942 ACATTTTCATTCATTGTTGTCCTCCACGCAATCTGAGCACCAGATGGAGGGTGGACTCCT 13001 Query 18139 TTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAA 18198 | || |||||||||||||||| || || ||| |||| || ||||| ||| |||| | Sbjct 13002 TCTGGATGTTGTAGTCGGCCAAGGTACGACCATCCTCCAGCTGCTTGCCTGCAAAGATCA 13061 Query 18199 GTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAA 18258 | || ||||| ||| | ||| ||||| || ||| | |||||||| | ||| Sbjct 13062 AACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGAATCTTCTGCTTGACATTCTCAA 13121 Query 18259 CAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAA 18318 || ||| || || ||| | ||| || | |||||||| | || ||||| || | Sbjct 13122 TAGAGTCTGAGGATTCCACTTCGAGGGTAATCGTCTTGCCGGTGAGCGTCTTTACGAAGA 13181 Query 18319 TTTGCAT 18325 | ||||| Sbjct 13182 TCTGCAT 13188 >seq20128 Length=1734 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||||| | | ||| |||| |||||| || || || ||||| ||||||||||| ||| Sbjct 1315 CCTCCCCTCAAGCGAAGCACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGCC 1256 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || | || |||| |||||||| ||| |||| | | ||| ||||| ||| Sbjct 1255 AAGGTGCGGCCGTCCTCCAGCTGTTTGCCTGCAAAGATCAAGCGTTGCTGATCAGGGGGA 1196 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | ||| ||||| || || | |||||| || | ||| || |||| | ||| | Sbjct 1195 ATGCCCTCCTTGTCCTGGATCTTTTGCTTCACATTCTCAATAGAGTCAGAGCTCTCAACT 1136 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || | |||||| | ||||| ||||| || || ||||| || ||||| Sbjct 1135 TCCAAGGTGATAGTCTTGCCAGTCAAGGTCTTGACAAAGATCTGCAT 1089 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || || | |||||| || ||||| |||||||||||||||||||| | || | ||| Sbjct 1528 AGCACGAGGTGAAGGGTAGATTCCTTTTGAATGTTGTAGTCGGCGAGGGTGCGGCCATCC 1469 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 || | |||||||| ||| |||| || | || || || ||| | ||| |||||||| Sbjct 1468 TCAAGCTGTTTGCCTGCAAAGATGAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTATCT 1409 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 ||| | ||||| || | | | | ||| | ||| ||||| ||| || | Sbjct 1408 TGAATCTTCTGCTTCACATTCTCGATGCTATCAGAGCTCTCCACTTCAAGGGTAATCGTC 1349 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||||| ||||| ||||| ||||| || ||||| Sbjct 1348 TTGCCAGTCAAAGTTTTGACAAAGATCTGCAT 1317 >seq30220 Length=1492 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 ||| ||||| | |||||| |||| || || || ||||| || || |||||||||||||| Sbjct 1105 TCCACCCCGCAATCTAAGCACCAGATGGAGAGTAGATTCCTTCTGGATGTTGTAGTCGGC 1164 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 || || || |||||| | || ||||| ||| |||| | | |||||| || || Sbjct 1165 CAAGGTGCGACCATCTTCGAGCTGCTTGCCTGCAAAGATCAAACGTTGTTGGTCGGGTGG 1224 Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | ||| ||||| || || | ||||| || | ||| |||| | ||| Sbjct 1225 GATGCCCTCCTTGTCCTGGATCTTCTGCTTTACATTCTCAATGCTGTCCGAGCTCTCAAC 1284 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || | ||||||| | ||||| ||||| ||||| ||||| || ||||| Sbjct 1285 CTCGAGGGTGATGGTCTTGCCAGTCAAAGTTTTGACAAAGATCTGCAT 1332 >seq50001 Length=390 Score = 95.1 bits (104), Expect = 9e-15 Identities = 156/225 (69%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 18101 TCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCAT 18160 ||||| || | ||| |||| |||||| || ||||| || |||||||||||||| |||| Sbjct 313 TCCCCTGAGACGAAGCACCAAGTGAAGGGTAGATTCCTTCTGAATGTTGTAGTCAGCCAG 254 Query 18161 TGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCAC 18220 || | ||| || | || ||||| ||| |||| | | || ||||| || | Sbjct 253 AGTGCGTCCATCCTCGAGCTGCTTGCCGGCAAAGATCAAACGCTGCTGATCGGGAGGGAT 194 Query 18221 GCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTC 18280 ||| ||||| || ||| | ||||| || | ||| | ||| | ||| ||| Sbjct 193 GCCCTCCTTGTCCTGAATCTTCTGCTTTACATTCTCAATCGAATCAGATGACTCCACTTC 134 Query 18281 AATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 | ||||||| | |||||||||||||| || ||||| || ||||| Sbjct 133 GAGGGTGATGGTCTTGCCGGTCAATGTCTTCACAAAGATCTGCAT 89 >seq17585 Length=2016 Score = 95.1 bits (104), Expect = 9e-15 Identities = 156/225 (69%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 18101 TCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCAT 18160 ||||| || | ||| |||| |||||| || ||||| || ||||||||||||||||||| Sbjct 1153 TCCCCTGAGGCGAAGCACCAAGTGAAGGGTAGATTCCTTCTGAATGTTGTAGTCGGCCAG 1212 Query 18161 TGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCAC 18220 || || || || | || ||||| ||| |||| || | || ||||| || | Sbjct 1213 GGTGCGACCGTCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGATCAGGTGGGAT 1272 Query 18221 GCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTC 18280 ||||||||| || ||| | || || || | | | ||||| | ||| || Sbjct 1273 GCCTTCCTTGTCCTGAATCTTCTGTTTCACATTCTCGATGCTGTCAGAAGACTCCACCTC 1332 Query 18281 AATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || ||||||| | ||||||||||| || || || || || ||||| Sbjct 1333 AAGGGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 1377 >seq49259 Length=868 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||||| || | ||| || | || || || || || ||||| |||||||| |||||| Sbjct 245 CCTCCCCTAAGGCGAAGCACTAAATGGAGGGTAGACTCCTTTTGGATGTTGTAATCGGCC 304 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || | ||| || | ||| || || || |||| || | || || || ||| Sbjct 305 AAGGTGCGGCCATCCTCAAGTTGCTTACCAGCGAAGATCAGACGCTGCTGGTCAGGGGGA 364 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | ||| |||||||| ||| | |||||||| | | ||| || |||| || || Sbjct 365 ATGCCCTCCTTATCTTGAATCTTCTGCTTGACGTTTTCAATAGAGTCAGAGGATTCCACC 424 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || | ||| ||| | || || ||||| ||||||||||| || ||||| Sbjct 425 TCGAGGGTAATGGTCTTTCCAGTCAAAGTTTTTACAAAGATCTGCAT 471 >seq29893 Length=915 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||||| | | ||| |||| ||| || || ||||| || || ||||||||||| ||| Sbjct 878 CCTCCCCTCAAACGAAGCACCAAGTGGAGGGTAGATTCCTTCTGGATGTTGTAGTCAGCC 819 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | ||| | ||| || | |||||||| ||| |||| || | || || || ||| Sbjct 818 AGTGTGCGGCCATCCTCGAGCTGTTTGCCTGCAAAGATGAGGCGCTGCTGGTCAGGGGGA 759 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | ||| ||||| || ||| | ||||| || | | | ||||| || || Sbjct 758 ATGCCCTCCTTGTCTTGAATCTTCTGCTTCACATTCTCGATGCTGTCAGAGGATTCCACC 699 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||| ||| ||| | ||||| ||||| || |||||||| || ||||| Sbjct 698 TCAAGGGTAATGGTCTTGCCAGTCAAAGTCTTTACAAAGATCTGCAT 652 >seq2942 Length=1743 Score = 87.8 bits (96), Expect = 1e-12 Identities = 168/247 (68%), Gaps = 2/247 (1%) Strand=Plus/Plus Query 18081 ACATTTTCTTTT--TGTTATCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTT 18138 |||||||| ||| |||| |||||| || | ||| || |||| || || || || || | Sbjct 1390 ACATTTTCGTTTATTGTTGTCCTCCTCGCAATCTGAGCACCAGATGGAGGGTGGACTCCT 1449 Query 18139 TTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAA 18198 | || ||||||||||| || | || || ||| || | || ||||| ||| |||| | Sbjct 1450 TCTGGATGTTGTAGTCTGCAAGGGTGCGACCATCCTCGAGCTGCTTGCCGGCAAAGATCA 1509 Query 18199 GTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAA 18258 | ||| || || || | |||||||| || || | ||||| || | | ||| Sbjct 1510 AACGTTGCTGGTCTGGAGGAATACCTTCCTTGTCCTGGATCTTCTGCTTCACATTTTCAA 1569 Query 18259 CAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAA 18318 | |||| | ||| ||| | |||||| | ||||| |||| || || ||||| | Sbjct 1570 TCGAGTCAGAGCTCTCCACTTCCAAGGTGATAGTCTTGCCAGTCAGGGTCTTCACAAAGA 1629 Query 18319 TTTGCAT 18325 ||||||| Sbjct 1630 TTTGCAT 1636 >seq49354 Length=412 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 18113 AAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATC 18172 ||| |||| ||||| || || || || ||||||||||||||||||| || | || Sbjct 201 AAGCACCAAATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCGGCCAAGGTACGGCCGTC 260 Query 18173 TTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC 18232 ||| | |||||||| ||| |||| || | ||||||||| || | ||| ||||| || Sbjct 261 TTCAAGCTGTTTGCCTGCAAAGATCAGACGTTGTTGATCAGGTGGGATGCCCTCCTTGTC 320 Query 18233 GGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCT 18292 ||| | ||||||||| | ||| | ||| || || ||| | ||| || | Sbjct 321 TTGAATCTTTTGCTTGACATTCTCAATCGAGTCTGAGGATTCCACTTCGAGGGTAATCGT 380 Query 18293 TTTGCCGGTCAATGTTTTTACAAAAATTTGCA 18324 ||||| || | || || || ||||| |||| Sbjct 381 CTTGCCAGTGAGCGTCTTCACGAAAATCTGCA 412 >seq6315 Length=1928 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||| | || | ||| |||| ||| || || ||||| || || ||||||||||| || Sbjct 1828 CCTCCTCTCAGGCGAAGGACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCT 1769 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || | ||| || | || ||||| || |||| || | |||||||| ||| Sbjct 1768 AGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGTTGATCAGGGGGA 1709 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | ||| ||||| || || | ||||||||| | | ||| | |||| || || | Sbjct 1708 ATGCCCTCCTTGTCTTGGATCTTTTGCTTGACGTTTTCAATCGAGTCAGAGGATTCCACT 1649 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328 || | ||| ||| | || || ||||| || || || || |||||||| || Sbjct 1648 TCGAGGGTAATGGTCTTTCCAGTCAAAGTCTTCACGAAGATTTGCATGTT 1599 >seq37486 Length=869 Score = 84.2 bits (92), Expect = 2e-11 Identities = 147/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 18113 AAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATC 18172 ||| |||| ||| || || ||||| || || ||||||||||| || | || || ||| Sbjct 343 AAGCACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCTGCAAGGGTGCGACCATC 402 Query 18173 TTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC 18232 |||| || ||||| ||| |||| || | || ||||| ||||| ||| ||||| || Sbjct 403 CTCCAGCTGCTTGCCTGCAAAGATGAGGCGCTGCTGATCAGGGGGCATGCCCTCCTTGTC 462 Query 18233 GGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCT 18292 || | |||||||| | | | || ||| || || || | ||||||| | Sbjct 463 CTGGATCTTCTGCTTGACATTCTCGATAGAGTCCGAGGATTCCACCTCGAGGGTGATGGT 522 Query 18293 TTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 || || |||||||| || || || || |||||| Sbjct 523 CTTTCCAGTCAATGTCTTGACGAAGATCTGCATT 556 >seq23330 Length=2255 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||||| || | ||| |||| ||||| || ||||| ||||||||||||||||||||| Sbjct 1972 CCTCCCCTAAGGCGAAGCACCAGATGAAGGGTGGATTCCTTTTGAATGTTGTAGTCGGCC 2031 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || | ||| |||| || ||||| ||| |||| || | || ||||| || Sbjct 2032 AAGGTACGGCCATCCTCCAGCTGCTTGCCTGCAAAGATGAGACGCTGCTGATCAGGTGGA 2091 Query 18219 ACGCCTTCCTTATC 18232 | ||||||||||| Sbjct 2092 ATACCTTCCTTATC 2105 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 ||| || || | |||||| |||| || || || || || || || ||||||||||| || Sbjct 1743 TCCACCACGCAATCTAAGCACCAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCTGC 1802 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 || || || |||||| | ||| ||||| ||| |||| || | |||||||| ||| Sbjct 1803 CAGGGTGCGACCATCTTCGAGTTGCTTGCCTGCAAAGATGAGGCGCTGTTGATCAGGGGG 1862 Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | ||| ||||| || || | |||||||| | | | | |||| | ||| Sbjct 1863 AATGCCCTCCTTGTCCTGGATCTTCTGCTTGACGTTCTCGATTGAGTCAGAGCTCTCCAC 1922 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||| | ||||| | ||||| || | || || ||||| || ||||| Sbjct 1923 TTCCAAAGTGATAGTCTTGCCAGTGAGCGTCTTCACAAAGATCTGCAT 1970 >seq23136 Length=1347 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||| ||| || || || || || || |||||||||||||||| || || ||| ||| Sbjct 1347 ACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAAGTACGACCATCCTCC 1288 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236 || || ||||| ||| |||| | | || ||||| || | ||||||||| || | Sbjct 1287 AACTGCTTGCCAGCAAAGATCAAACGCTGCTGATCAGGTGGGATGCCTTCCTTGTCCTGA 1228 Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296 || | ||||| || | ||| || ||| | |||| || | |||||| | ||| Sbjct 1227 ATCTTCTGCTTCACATTCTCAATAGAGTCGGAGCTCTCGACCTCCAAAGTGATGGTCTTG 1168 Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || ||||| || || || || || ||||| Sbjct 1167 CCAGTCAAGGTCTTGACGAAGATCTGCAT 1139 >seq25074 Length=2226 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| ||| || || || || ||||| ||||||||||| || | || || || Sbjct 230 AGCACCAAGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCTGCAAGGGTGCGACCGTCC 289 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 |||| || ||||| || |||| || | |||||||| || | ||||||||| || Sbjct 290 TCCAGCTGCTTGCCAGCGAAGATCAGACGCTGTTGATCAGGTGGGATGCCTTCCTTGTCC 349 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 ||| | |||||||| | | ||| || ||| || || |||| || | | | Sbjct 350 TGAATCTTATGCTTGACGTTTTCAATAGAGTCTGAGGATTCCACCTCAAGAGTAACGGTC 409 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328 || |||||||| || || || || |||||||| || Sbjct 410 TTTCCGGTCAAAGTCTTCACGAAGATTTGCATGTT 444 >seq21227 Length=1716 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||||| || | ||| |||| || || || ||||| ||||| ||||||||||| ||| Sbjct 1318 CCTCCCCTCAGACGAAGCACCAAATGGAGAGTAGATTCCTTTTGGATGTTGTAGTCAGCC 1259 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || | ||| || | || || || || | ||||| | |||||||| ||| Sbjct 1258 AGGGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAAATAAGGCGCTGTTGATCTGGGGGA 1199 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | ||| ||||| || || | ||||||||| | ||| | |||| || || Sbjct 1198 ATGCCCTCCTTGTCTTGGATCTTTTGCTTGACGTTCTCAATCGAGTCAGAGGATTCCACC 1139 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 || | ||| ||| | || || ||||| || || || || ||||||||| Sbjct 1138 TCGAGGGTAATGGTCTTTCCAGTCAAAGTCTTCACGAAGATTTGCATT 1091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379077728251530