Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20comandoni_20[genbank_20GCA_5F002025285.1_202017-03- 13] 57,594 sequences; 86,214,659 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq17585 131 2e-25 seq43562 127 2e-24 seq49354 122 9e-23 seq20128 122 9e-23 seq23136 118 1e-21 seq21914 118 1e-21 seq26564 116 4e-21 seq3581 116 4e-21 seq50001 111 2e-19 seq49259 111 2e-19 seq4039 107 2e-18 seq30220 104 2e-17 seq17103 104 2e-17 seq43176 102 8e-17 seq16312 102 8e-17 seq49647 100 3e-16 seq29893 100 3e-16 seq21227 98.7 1e-15 seq25074 95.1 1e-14 seq21456 95.1 1e-14 seq9092 95.1 1e-14 seq2 89.7 5e-13 >seq17585 Length=2016 Score = 131 bits (144), Expect = 2e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCG 139615 || ||||||| ||||| || || |||||||| || ||| || |||| ||| ||| Sbjct 1169 ACCAAGTGAAGGGTAGATTCCTTCTGAATGTTGTAGTCGGCCAGGGTGCGACCGTCCTCG 1228 Query 139616 AGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTG 139675 ||||| || |||||| |||| || || |||||||| || || |||||||| ||||| Sbjct 1229 AGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGATCAGGTGGGATGCCTTCCTTGTCCTGA 1288 Query 139676 ATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTG 139735 || || ||||| | | || | |||| | | ||||||||||| ||| | |||||| Sbjct 1289 ATCTTCTGTTTCACATTCTCGATGCTGTCAGAAGACTCCACCTCAAGGGTGATGGTCTTG 1348 Query 139736 CCGGTCAACGTTTTTACGAATATTTGCATA 139765 |||||||| || || ||||| || |||||| Sbjct 1349 CCGGTCAAGGTCTTGACGAAGATCTGCATA 1378 Score = 118 bits (130), Expect = 1e-21 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCG-C 139595 ||| |||| || || | ||| ||||| | ||||| || ||| || |||| || ||| | Sbjct 1606 GCCTCCTCTTAGGCGAAGAACCAAGTGGAGGGTAGATTCCTTTGGA-TGTTGTAGTCGAC 1664 Query 139596 TCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 139655 || |||| ||| || ||||| || || ||| |||||| ||| ||||||||||||| Sbjct 1665 GCAGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAAACGCTGCTGATCGGGAG 1724 Query 139656 GTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCA 139715 | ||||| || ||||| ||| || || |||| | || | | || | || ||| | Sbjct 1725 GAATGCCCTCCTTGTCCTGGATCTTCTGCTTTACATTCTCGATGCTATCAGAGGACTCGA 1784 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||||| ||| | ||||| || ||||| |||||||| || || ||||| Sbjct 1785 CCTCAAGGGTAATGGTCTTTCCTGTCAAAGTTTTTACAAAGATCTGCAT 1833 >seq43562 Length=381 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| |||| |||||| | || ||||| | || || || || || ||||| || ||| Sbjct 124 GCCTCCTCTTAAACGAAGCACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGC 183 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 || |||| ||| |||||||| || ||||| |||||| ||| |||||||||||||| Sbjct 184 CAAGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGATCGGGAGG 243 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 ||||| || ||||| ||| || || |||| | || | | || | || ||| || Sbjct 244 AATGCCCTCCTTGTCCTGGATCTTCTGCTTTACATTCTCGATGCTATCAGAGGACTCGAC 303 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||| ||| | ||||| || ||||| |||||||| || || ||||| Sbjct 304 CTCAAGGGTAATGGTCTTTCCTGTCAAAGTTTTTACAAAGATCTGCAT 351 >seq49354 Length=412 Score = 122 bits (134), Expect = 9e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| |||| ||||| | || || |||| |||||||| || |||||||| || ||| Sbjct 186 GCCTCCTCTCAAACGAAGCACCAAATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCGGC 245 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 || || | |||||| |||||||| || ||| ||||||||||||| ||||| || || Sbjct 246 CAAGGTACGGCCGTCTTCAAGCTGTTTGCCTGCAAAGATCAGACGTTGTTGATCAGGTGG 305 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 ||||| || ||||| || ||||| || | | || | | ||| | || ||||| Sbjct 306 GATGCCCTCCTTGTCTTGAATCTTTTGCTTGACATTCTCAATCGAGTCTGAGGATTCCAC 365 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCA 139763 || | ||| | ||||||||| || | ||| || ||||| || |||| Sbjct 366 TTCGAGGGTAATCGTCTTGCCAGTGAGCGTCTTCACGAAAATCTGCA 412 Score = 86.0 bits (94), Expect = 6e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 || ||||||||||| || ||| |||||| |||||| || || || || || || |||||| Sbjct 31 TCCTCGAGCTGTTTGCCTGCAAAGATCAAACGTTGTTGGTCAGGTGGAATACCCTCTTTG 90 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729 || ||| || || || | | || | |||| | | |||||| || | ||| | Sbjct 91 TCCTGGATCTTCTGCTTCACATTCTCAATGCTGTCCGAGCTCTCCACTTCCAAGGTGATG 150 Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||||||| ||||| || || ||||| || ||||| Sbjct 151 GTCTTGCCAGTCAAGGTCTTGACGAAAATCTGCAT 185 >seq20128 Length=1734 Score = 122 bits (134), Expect = 9e-23 Identities = 171/239 (72%), Gaps = 1/239 (0%) Strand=Plus/Minus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| |||| || || | || ||||| | ||||| || || || ||||| |||||| Sbjct 1088 GCCTCCTCTTAGGCGGAGCACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAATCGGC 1029 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | || | ||| || ||||| |||||||| |||| |||||||||||||| || || Sbjct 1028 GAGGGTACGGCCGTCCTCCAGCTGCTTACCAGCGAAGATGAGACGTTGCTGATCAGGGGG 969 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 ||||| || ||||| || ||||| || | | ||| | | ||| | || ||||| Sbjct 968 AATGCCCTCCTTGTCCTGAATCTTTTGCTTGACGTTTTCAATAGAGTCTGAGGATTCCAC 909 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATAG-CTTATGTT 139774 ||| | || | |||||| || ||||| ||||| ||||| |||||||| | ||||||| Sbjct 908 CTCCAGAGTAATCGTCTTTCCAGTCAAAGTTTTCACGAAGATTTGCATTGTGTTATGTT 850 Score = 102 bits (112), Expect = 8e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCG 139615 || ||||||| || ||||| ||||| ||||| || || || |||| ||| || Sbjct 1297 ACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGCCAAGGTGCGGCCGTCCTCC 1238 Query 139616 AGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTG 139675 |||||||| || ||| |||||| ||||||||||| || || ||||| || ||||| | Sbjct 1237 AGCTGTTTGCCTGCAAAGATCAAGCGTTGCTGATCAGGGGGAATGCCCTCCTTGTCCTGG 1178 Query 139676 ATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTG 139735 || ||||| || | | || | | ||| | | ||| || || | ||| | |||||| Sbjct 1177 ATCTTTTGCTTCACATTCTCAATAGAGTCAGAGCTCTCAACTTCCAAGGTGATAGTCTTG 1118 Query 139736 CCGGTCAACGTTTTTACGAATATTTGCAT 139764 || ||||| || || || || || ||||| Sbjct 1117 CCAGTCAAGGTCTTGACAAAGATCTGCAT 1089 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| |||| | |||| || | ||||| ||||| || ||||||||||| || ||| Sbjct 1544 GCCTCCTCTCAGGCGCAGCACGAGGTGAAGGGTAGATTCCTTTTGAATGTTGTAGTCGGC 1485 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | |||| || || |||||||| || ||| |||| ||||| ||||| || || || Sbjct 1484 GAGGGTGCGGCCATCCTCAAGCTGTTTGCCTGCAAAGATGAGACGCTGCTGGTCAGGGGG 1425 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 ||||| || || || || || || || | | || | | || | | |||||| Sbjct 1424 GATGCCCTCCTTATCTTGAATCTTCTGCTTCACATTCTCGATGCTATCAGAGCTCTCCAC 1365 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||| ||| | ||||||||| ||||| ||||| || || || ||||| Sbjct 1364 TTCAAGGGTAATCGTCTTGCCAGTCAAAGTTTTGACAAAGATCTGCAT 1317 >seq23136 Length=1347 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| |||| |||||| | || ||||| | || || || || || ||||| || ||| Sbjct 1138 GCCTCCTCTTAAACGAAGCACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGC 1079 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 || |||| ||| |||||||| || ||||| |||||| ||| |||||||||||||| Sbjct 1078 CAAGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGATCGGGAGG 1019 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 ||||| || ||||| ||| || || |||| | || | |||| | | ||| || Sbjct 1018 AATGCCCTCCTTGTCCTGGATCTTCTGCTTTACATTCTCGATGCTGTCCGAGCTCTCAAC 959 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| | ||| | ||||| || ||||| || || ||||| || ||||| Sbjct 958 CTCGAGGGTGATGGTCTTACCAGTCAAAGTCTTGACGAAAATCTGCAT 911 >seq21914 Length=1598 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| |||| ||||| | || ||||||| ||||| || || || |||||||| || Sbjct 391 GCCACCTCTCAAACGAAGCACCAAGTGAAGGGTAGATTCCTTCTGGATGTTATAGTCAGC 332 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | |||| || || |||||||| || ||| |||||| |||||||||||| || || Sbjct 331 AAGGGTGCGGCCATCCTCCAGCTGTTTGCCTGCAAAGATCAAACGTTGCTGATCAGGTGG 272 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 ||||| || ||||| ||| || || || | | ||| | || ||| | | ||| || Sbjct 271 GATGCCCTCCTTGTCCTGGATCTTCTGCTTGACGTTTTCGATTGAGTCAGAGCTCTCGAC 212 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | ||| | |||||||||||||| || || || || |||||||| Sbjct 211 TTCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACAAAGATTTGCAT 164 >seq26564 Length=912 Score = 116 bits (128), Expect = 4e-21 Identities = 157/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 139550 CGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATC-GCTCATTGTGCTCGA 139608 ||||| || | || | |||||||| || || ||||| || || ||| | ||||| Sbjct 263 CGCAATACAAGATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCTGCT-AGTGTGCGGCC 205 Query 139609 GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 139668 ||| ||||||||||| || ||| |||| ||||||||||| || || || || || ||||| Sbjct 204 GTCCTCGAGCTGTTTGCCTGCAAAGATGAGACGTTGCTGGTCAGGGGGGATACCCTCTTT 145 Query 139669 GTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCAC 139728 ||| || || || || | | || | |||| | || ||| ||||||| ||| | Sbjct 144 GTCTTGAATCTTCTGCTTCACATTCTCGATGCTGTCAGAGGACTCGACCTCAAGGGTAAT 85 Query 139729 CGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||||||| ||||| |||||||| || || ||||| Sbjct 84 GGTCTTGCCAGTCAAAGTTTTTACAAAGATCTGCAT 49 >seq3581 Length=10373 Score = 116 bits (128), Expect = 4e-21 Identities = 156/217 (72%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 139549 ACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGA 139608 |||||| || ||||||| || ||||| ||||| ||||| || || || |||| Sbjct 5485 ACGCAACACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCAGCCAGAGTGCGGCC 5426 Query 139609 GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 139668 ||| |||||||| || || ||| ||||||||||||||||||| || || || || || || Sbjct 5425 GTCCTCGAGCTGCTTGCCGGCAAAGATCAGACGTTGCTGATCAGGGGGGATCCCCTCCTT 5366 Query 139669 GTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCAC 139728 ||| ||| || ||||| | | || | | ||| | | |||||| || | ||| | Sbjct 5365 GTCCTGGATCTTCTGTTTGACATTCTCAATAGAGTCAGAGCTCTCCACTTCCAAGGTGAT 5306 Query 139729 CGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 |||||||| || | || || ||||| || |||||| Sbjct 5305 GGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCATA 5269 Score = 102 bits (112), Expect = 8e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCG 139615 || ||||||| ||||| || || |||||||| || || || || | || ||| Sbjct 5250 ACCAAGTGAAGGGTAGATTCCTTCTGAATGTTGTAGTCAGCCAAGGTACGGCCATCCTCG 5191 Query 139616 AGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTG 139675 ||||| || || ||| ||||||||||||||||||| || || ||||| || || || Sbjct 5190 AGCTGCTTGCCTGCAAAGATCAGACGTTGCTGATCAGGTGGGATGCCCTCCTTATCCTGA 5131 Query 139676 ATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTG 139735 || || || || | | ||| | | || | || ||| ||||||| ||| | |||||| Sbjct 5130 ATCTTCTGCTTCACATTTTCAATGGAATCAGAGGACTCGACCTCAAGGGTGATGGTCTTG 5071 Query 139736 CCGGTCAACGTTTTTACGAATATTTGCAT 139764 || ||||| || || || || || ||||| Sbjct 5070 CCAGTCAAGGTCTTGACAAAGATCTGCAT 5042 >seq50001 Length=390 Score = 111 bits (122), Expect = 2e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGC-TCGAGTCTTC 139614 || ||||||| ||||| || || |||||||| || || || |||| || | || || Sbjct 297 ACCAAGTGAAGGGTAGATTCCTTCTGAATGTTGTAGTCAGCCAGAGTGCGTCCA-TCCTC 239 Query 139615 GAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGT 139674 |||||| || || ||| |||||| ||| |||||||||||||| ||||| || ||||| Sbjct 238 GAGCTGCTTGCCGGCAAAGATCAAACGCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTG 179 Query 139675 GATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTT 139734 || || || |||| | || | | || | | |||||| || | ||| | ||||| Sbjct 178 AATCTTCTGCTTTACATTCTCAATCGAATCAGATGACTCCACTTCGAGGGTGATGGTCTT 119 Query 139735 GCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||||||| || || || || || ||||| Sbjct 118 GCCGGTCAATGTCTTCACAAAGATCTGCAT 89 >seq49259 Length=868 Score = 111 bits (122), Expect = 2e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 139549 ACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGA 139608 ||| | ||| ||||| | || ||||| || || ||||| || ||| || |||| Sbjct 28 ACGAAGAACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAAGTGCGACC 87 Query 139609 GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 139668 || || | ||| || |||||| |||||| |||||||||||||||||| |||||||| || Sbjct 88 ATCCTCCAACTGCTTGCCAGCAAAGATCAAACGTTGCTGATCGGGAGGAATGCCTTCCTT 147 Query 139669 GTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCAC 139728 ||| ||| || || || | | || | | || | | ||| ||||| | || | Sbjct 148 GTCCTGGATCTTCTGCTTCACATTCTCAATCGAATCAGAGCTCTCTACCTCCAAAGTGAT 207 Query 139729 CGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||||||| ||||| || || ||||| || ||||| Sbjct 208 CGTCTTGCCAGTCAAGGTCTTGACGAAGATCTGCAT 243 >seq4039 Length=8492 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCG 139615 || || |||| || || || ||||| ||||| || || | |||| ||||| Sbjct 7296 ACCAAATGAAGAGTGGATTCCTTTTGGATGTTGTAGTCTGCAAGAGTGCGGCCATCTTCA 7237 Query 139616 AGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTG 139675 ||||| || || ||| |||||| |||||||||||| || || ||||| || ||||| | Sbjct 7236 AGCTGCTTGCCGGCAAAGATCAAACGTTGCTGATCAGGGGGAATGCCCTCCTTGTCCTGG 7177 Query 139676 ATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTG 139735 || ||||| || | | ||| | | ||| | || |||||||| | ||| | ||||| Sbjct 7176 ATCTTTTGCTTGACGTTTTCAATAGAGTCAGAGGATTCCACCTCGAGGGTGATGGTCTTT 7117 Query 139736 CCGGTCAACGTTTTTACGAATATTTGCAT 139764 || ||||| || || ||||| |||||||| Sbjct 7116 CCAGTCAAAGTCTTCACGAAGATTTGCAT 7088 >seq30220 Length=1492 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 ||||| || || || ||||| || ||| || |||| ||||||||||| || || Sbjct 1136 GTAGATTCCTTCTGGATGTTGTAGTCGGCCAAGGTGCGACCATCTTCGAGCTGCTTGCCT 1195 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 ||| |||||| |||||| || ||||| || ||||| || ||||| ||| || || ||| Sbjct 1196 GCAAAGATCAAACGTTGTTGGTCGGGTGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTT 1255 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | || | |||| | | ||| ||||| | ||| | |||||||| ||||| ||| Sbjct 1256 ACATTCTCAATGCTGTCCGAGCTCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAAAGTT 1315 Query 139748 TTTACGAATATTTGCAT 139764 || || || || ||||| Sbjct 1316 TTGACAAAGATCTGCAT 1332 >seq17103 Length=3258 Score = 104 bits (114), Expect = 2e-17 Identities = 154/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 139550 CGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATC-GCTCATTGTGCTCGA 139608 ||||| || | || | |||||||| ||||| ||||| || || ||| | ||||| Sbjct 2544 CGCAATACAAGATGCAGAGTAGACTCCTTTTGGATGTTGTAGTCTGCT-AGTGTGCGGCC 2486 Query 139609 GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 139668 || || ||||||||||| ||| |||| |||||||||||||| || || || || || || Sbjct 2485 ATCCTCAAGCTGTTTACCGGCAAAGATAAGACGTTGCTGATCAGGGGGGATACCCTCCTT 2426 Query 139669 GTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCAC 139728 ||| || || || || | | || | | ||| | | |||||| || | ||| | Sbjct 2425 GTCTTGAATCTTCTGCTTCACATTCTCAATCGAGTCCGAGCTCTCCACTTCCAAGGTAAT 2366 Query 139729 CGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||| || ||||| |||||||| || || ||||| Sbjct 2365 GGTCTTTCCTGTCAAAGTTTTTACAAAGATCTGCAT 2330 >seq43176 Length=399 Score = 102 bits (112), Expect = 8e-17 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 || |||||||| || || ||| |||||| ||| || || || || || ||||| || ||| Sbjct 4 TCCTCGAGCTGCTTGCCGGCAAAGATCAAACGCTGTTGGTCTGGTGGGATGCCCTCCTTG 63 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729 || ||| || || || | | ||| | |||| | || ||||||||||| ||| | Sbjct 64 TCTTGGATCTTCTGCTTCACGTTTTCGATGCTGTCAGAGGACTCCACCTCAAGGGTGATG 123 Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 |||||||||||||| || || ||||| || |||||| Sbjct 124 GTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCATA 159 >seq16312 Length=2383 Score = 102 bits (112), Expect = 8e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCG 139615 || ||||| | ||||| || ||||||||||| || || | |||| || || Sbjct 2064 ACCAAGTGGAGGGTAGATTCCTTTTGAATGTTGTAGTCAGCGAGGGTGCGGCCATCCTCC 2005 Query 139616 AGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTG 139675 |||||||| || ||| |||| ||||| |||||||| || || ||||| || ||||| Sbjct 2004 AGCTGTTTGCCTGCAAAGATGAGACGCTGCTGATCAGGTGGGATGCCCTCCTTGTCTTGA 1945 Query 139676 ATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTG 139735 || || || || | | ||| | | ||| | || |||||||| | ||| | ||||| Sbjct 1944 ATCTTCTGCTTCACGTTTTCAATAGAGTCAGAGGATTCCACCTCGAGGGTGATGGTCTTT 1885 Query 139736 CCGGTCAACGTTTTTACGAATATTTGCAT 139764 || ||||| || || ||||| |||||||| Sbjct 1884 CCAGTCAAAGTCTTCACGAAGATTTGCAT 1856 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATC-GCT 139596 || |||| ||||| | || | ||||| || ||||| || || ||||| || || ||| Sbjct 2310 CCACCTCTCAAACGAAGGACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCAGCT 2251 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | ||||| || ||||| || |||||||| ||||||||||||| || ||||| || Sbjct 2250 -AGTGTGCGACCATCCTCGAGTTGCTTACCAGCGAAGATCAGACGTTGTTGGTCGGGTGG 2192 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 ||||| || ||||| ||| ||||| || | | || | |||| | | || || Sbjct 2191 AATGCCCTCCTTGTCCTGGATCTTTTGCTTGACGTTCTCGATGCTGTCAGATGATTCAAC 2132 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | || | ||||| || || | ||||||||| || |||||||| Sbjct 2131 TTCCAGAGTAATGGTCTTTCCAGTGAGCGTTTTTACAAAGATTTGCAT 2084 >seq49647 Length=441 Score = 100 bits (110), Expect = 3e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 139555 AACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTC 139614 ||| ||||||| || ||||| || || ||||| || || || |||| ||| || Sbjct 193 AACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCAGCCAAGGTGCGGCCGTCCTC 252 Query 139615 GAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGT 139674 ||| || |||||||| ||||||||||||| || ||||| || ||||| || ||||| Sbjct 253 GAGTTGCTTACCAGCGAAGATCAGACGTTGTTGGTCGGGTGGAATGCCCTCCTTGTCCTG 312 Query 139675 GATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTT 139734 ||| ||||| || | | || | |||| | | || || || | || | ||||| Sbjct 313 GATCTTTTGCTTGACGTTCTCGATGCTGTCAGATGATTCAACTTCCAGAGTAATGGTCTT 372 Query 139735 GCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || || | ||||||||| || |||||||| Sbjct 373 TCCAGTGAGCGTTTTTACAAAGATTTGCAT 402 >seq29893 Length=915 Score = 100 bits (110), Expect = 3e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 139547 AAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTC 139606 ||||| | || ||||| | ||||| || || || ||||| || || || ||||| Sbjct 869 AAACGAAGCACCAAGTGGAGGGTAGATTCCTTCTGGATGTTGTAGTCAGCCAGTGTGCGG 810 Query 139607 GAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCT 139666 || ||||||||||| || ||| |||| || || ||||| || || || ||||| || Sbjct 809 CCATCCTCGAGCTGTTTGCCTGCAAAGATGAGGCGCTGCTGGTCAGGGGGAATGCCCTCC 750 Query 139667 TTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTC 139726 ||||| || || || || | | || | |||| | || |||||||||| ||| Sbjct 749 TTGTCTTGAATCTTCTGCTTCACATTCTCGATGCTGTCAGAGGATTCCACCTCAAGGGTA 690 Query 139727 ACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 | |||||||| ||||| || ||||| || || ||||| Sbjct 689 ATGGTCTTGCCAGTCAAAGTCTTTACAAAGATCTGCAT 652 >seq21227 Length=1716 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATC-GCT 139596 || |||| ||||| | || | ||||| || ||||| || || ||||| || || ||| Sbjct 1546 CCACCTCTCAAACGAAGGACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCAGCT 1487 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | ||||| || ||||| || |||||||| ||||||||||||| || ||||| || Sbjct 1486 -AGTGTGCGACCATCCTCGAGTTGCTTACCAGCGAAGATCAGACGTTGTTGGTCGGGTGG 1428 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 ||||| || ||||| ||| ||||| || | | || | | || | | |||||| Sbjct 1427 AATGCCCTCCTTGTCCTGGATCTTTTGCTTGACGTTCTCGATGCTATCAGAGCTCTCCAC 1368 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | || | ||||| || || | ||||||||| || || ||||| Sbjct 1367 TTCCAGAGTGATGGTCTTTCCAGTGAGCGTTTTTACAAAGATCTGCAT 1320 Score = 87.8 bits (96), Expect = 2e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 || |||||||| || || ||| |||| || || ||||| || ||||| |||||||| ||| Sbjct 1702 TCCTCGAGCTGCTTGCCTGCAAAGATGAGGCGCTGCTGGTCTGGAGGGATGCCTTCCTTG 1643 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729 || || || || || | | || | |||| | || ||| ||||||| || | Sbjct 1642 TCCTGAATCTTCTGCTTCACATTCTCGATGCTGTCAGAGGACTCGACCTCAAGCGTGATG 1583 Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 |||||||||||||| || || || || || |||||| Sbjct 1582 GTCTTGCCGGTCAAGGTCTTCACAAAGATCTGCATA 1547 >seq25074 Length=2226 Score = 95.1 bits (104), Expect = 1e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 || || |||||||| || || |||||||||| ||||| ||||| || ||||| || ||| Sbjct 59 TCCTCCAGCTGTTTGCCTGCGAAGATCAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTG 118 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729 || || || ||||| | | ||| | | ||| | || |||||| || | || | | Sbjct 119 TCCTGAATCTTCTGTTTGACATTTTCAATAGAGTCAGAGGACTCCACTTCCAAAGTGATC 178 Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||||||||||| || || ||||| || ||||| Sbjct 179 GTCTTGCCGGTCAGGGTCTTAACGAAGATCTGCAT 213 >seq21456 Length=1382 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATC-GC 139595 ||| |||| ||||| | || ||||||| || ||||| || || ||||| || || || Sbjct 476 GCCTCCTCTCAAACGAAGTACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCAGC 417 Query 139596 TCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 139655 | | ||||| ||| || ||||| || || ||| |||||| ||||||||||| || | Sbjct 416 T-AGTGTGCGGCCGTCCTCCAGCTGCTTGCCTGCAAAGATCAAGCGTTGCTGATCAGGTG 358 Query 139656 GTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCA 139715 | ||||| ||||| || ||| || || || | | || | | || | || || | Sbjct 357 GAATGCCCTCTTTATCTTGGATCTTCTGCTTCACATTCTCGATGCTATCAGAGGATTCTA 298 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 | || | || | ||||| || |||| ||||||||| || || ||||| Sbjct 297 CTTCCAGAGTAATGGTCTTTCCAGTCAGCGTTTTTACAAAGATCTGCAT 249 >seq9092 Length=1269 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 ||||| || || || ||||| || ||| || |||| || ||||||||||| || Sbjct 241 GTAGATTCCTTCTGGATGTTGTAGTCGGCCAACGTGCGGCCATCCTCGAGCTGTTTGCCT 182 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 ||| |||||| || ||||| ||||| || ||||| || ||||| || ||||| || Sbjct 181 GCAAAGATCAAGCGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCTTGAATCTTTTGCTTG 122 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | || | | ||| | || ||||| || | ||| | ||||||||| || | ||| Sbjct 121 ACATTCTCAATCGAGTCTGAGGATTCCACTTCGAGGGTAATCGTCTTGCCAGTGAGCGTC 62 Query 139748 TTTACGAATATTTGCAT 139764 || ||||| || ||||| Sbjct 61 TTCACGAAAATCTGCAT 45 >seq2 Length=13225 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || ||||| || || ||||| || ||| || || | || || ||||| || || Sbjct 12992 GTGGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTACGACCATCCTCCAGCTGCTTGCCT 13051 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 ||| |||||| ||| |||||||| || || ||||| || ||||| || || || || Sbjct 13052 GCAAAGATCAAACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGAATCTTCTGCTTG 13111 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | || | | ||| | || ||||| || | ||| | |||||||||||| | ||| Sbjct 13112 ACATTCTCAATAGAGTCTGAGGATTCCACTTCGAGGGTAATCGTCTTGCCGGTGAGCGTC 13171 Query 139748 TTTACGAATATTTGCAT 139764 |||||||| || ||||| Sbjct 13172 TTTACGAAGATCTGCAT 13188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495706871124800