Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20comandoni_20[genbank_20GCA_5F002025285.1_202017-03- 13] 57,594 sequences; 86,214,659 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq20128 131 2e-25 seq49354 125 7e-24 seq21456 116 4e-21 seq49259 114 1e-20 seq43562 114 1e-20 seq17585 113 5e-20 seq50001 111 2e-19 seq23136 109 6e-19 seq26564 107 2e-18 seq17103 107 2e-18 seq25074 105 7e-18 seq49647 104 2e-17 seq16312 102 8e-17 seq4039 102 8e-17 seq21914 96.9 4e-15 seq3581 95.1 1e-14 seq37486 89.7 5e-13 seq21227 89.7 5e-13 seq2 86.0 6e-12 seq20129 84.2 2e-11 seq49985 82.4 8e-11 >seq20128 Length=1734 Score = 131 bits (144), Expect = 2e-25 Identities = 173/239 (72%), Gaps = 1/239 (0%) Strand=Plus/Minus Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016 |||||||| || || | || || || | |||||||| || || |||||||||||| Sbjct 1088 GCCTCCTCTTAGGCGGAGCACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAATCGGC 1029 Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | || | ||| || || || |||||||| |||| |||||||||||||| || || Sbjct 1028 GAGGGTACGGCCGTCCTCCAGCTGCTTACCAGCGAAGATGAGACGTTGCTGATCAGGGGG 969 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 ||||| || ||||| ||| ||||| || | | ||| | | ||| | || ||| || Sbjct 968 AATGCCCTCCTTGTCCTGAATCTTTTGCTTGACGTTTTCAATAGAGTCTGAGGATTCCAC 909 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATAG-CTTATGTT 143194 || | ||| | |||||| || ||||| ||||| ||||| |||||||| | ||||||| Sbjct 908 CTCCAGAGTAATCGTCTTTCCAGTCAAAGTTTTCACGAAGATTTGCATTGTGTTATGTT 850 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016 |||||| | || || | || || |||| || || || ||||| |||||||| || Sbjct 1316 GCCTCCCCTCAAGCGAAGCACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGC 1257 Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 || |||| ||| || || ||||| || ||| |||||| ||||||||||| || || Sbjct 1256 CAAGGTGCGGCCGTCCTCCAGCTGTTTGCCTGCAAAGATCAAGCGTTGCTGATCAGGGGG 1197 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 ||||| || ||||| || ||||| || | | || | | ||| | | || || Sbjct 1196 AATGCCCTCCTTGTCCTGGATCTTTTGCTTCACATTCTCAATAGAGTCAGAGCTCTCAAC 1137 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||| | || | |||||||| ||||| || || || || || ||||| Sbjct 1136 TTCCAAGGTGATAGTCTTGCCAGTCAAGGTCTTGACAAAGATCTGCAT 1089 >seq49354 Length=412 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016 |||||||| ||||| | || ||||||| ||||| || || || |||||||| ||| Sbjct 186 GCCTCCTCTCAAACGAAGCACCAAATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCGGC 245 Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 || || | |||||| || ||||| || ||| ||||||||||||| ||||| || || Sbjct 246 CAAGGTACGGCCGTCTTCAAGCTGTTTGCCTGCAAAGATCAGACGTTGTTGATCAGGTGG 305 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 ||||| || ||||| ||| ||||| || | | || | || ||| | || ||| || Sbjct 306 GATGCCCTCCTTGTCTTGAATCTTTTGCTTGACATTCTCAATCGAGTCTGAGGATTCCAC 365 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCA 143183 ||| | || | ||||||||| || | || || ||||| || |||| Sbjct 366 TTCGAGGGTAATCGTCTTGCCAGTGAGCGTCTTCACGAAAATCTGCA 412 >seq21456 Length=1382 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 ||||| || || | | || ||||||| || ||||| ||||| ||||||||||| | Sbjct 703 CCTCCACGCAATCTGAGCACCAAATGAAGGGTGGATTCCTTTTGGATGTTGTAATCAGCC 644 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | |||| ||| ||||| || ||||| ||| |||| || || |||||||| || || Sbjct 643 AGGGTGCGGCCGTCCTCGAGCTGCTTACCGGCAAAGATGAGGCGCTGCTGATCAGGTGGA 584 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 ||||| || ||||| || || || || | | || | || ||| | || ||| ||| Sbjct 583 ATGCCCTCCTTGTCCTGGATCTTCTGCTTGACGTTCTCAATCGAGTCAGAGGATTCAACT 524 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || | ||| | |||||||| |||||||| || || || || ||||| Sbjct 523 TCCAAAGTGATGGTCTTGCCAGTCAATGTCTTGACAAAAATCTGCAT 477 Score = 100 bits (110), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATC-GC 143015 |||||||| ||||| | || || |||| || || || || || |||||||| || || Sbjct 476 GCCTCCTCTCAAACGAAGTACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCAGC 417 Query 143016 TCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 143075 | | ||||| ||| || || || || || ||| |||||| ||||||||||| || | Sbjct 416 T-AGTGTGCGGCCGTCCTCCAGCTGCTTGCCTGCAAAGATCAAGCGTTGCTGATCAGGTG 358 Query 143076 GTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTA 143135 | ||||| ||||| || || || || || | | || | | || | || ||||| Sbjct 357 GAATGCCCTCTTTATCTTGGATCTTCTGCTTCACATTCTCGATGCTATCAGAGGATTCTA 298 Query 143136 CTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 |||| | ||| | ||||| || |||| |||||||| || || ||||| Sbjct 297 CTTCCAGAGTAATGGTCTTTCCAGTCAGCGTTTTTACAAAGATCTGCAT 249 >seq49259 Length=868 Score = 114 bits (126), Expect = 1e-20 Identities = 152/211 (72%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 142976 ACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCG 143035 |||||||| | ||||| || ||||| |||||||||||| || |||| || || Sbjct 263 ACTAAATGGAGGGTAGACTCCTTTTGGATGTTGTAATCGGCCAAGGTGCGGCCATCCTCA 322 Query 143036 AGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTA 143095 ||||| |||||||| |||||||||| ||||| || || || ||||| || || || | Sbjct 323 AGTTGCTTACCAGCGAAGATCAGACGCTGCTGGTCAGGGGGAATGCCCTCCTTATCTTGA 382 Query 143096 ATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTG 143155 || || || || | | ||| | | ||| | || ||| || || | || | ||||| Sbjct 383 ATCTTCTGCTTGACGTTTTCAATAGAGTCAGAGGATTCCACCTCGAGGGTAATGGTCTTT 442 Query 143156 CCGGTCAATGTTTTTACGAATATTTGCATAG 143186 || ||||| |||||||| || || ||||||| Sbjct 443 CCAGTCAAAGTTTTTACAAAGATCTGCATAG 473 Score = 102 bits (112), Expect = 8e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 142969 ACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGA 143028 ||| | ||| || || | || || || || || |||||||| ||| || |||| Sbjct 28 ACGAAGAACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAAGTGCGACC 87 Query 143029 GTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 143088 || || | || || |||||| |||||| |||||||||||||||||| |||||||| || Sbjct 88 ATCCTCCAACTGCTTGCCAGCAAAGATCAAACGTTGCTGATCGGGAGGAATGCCTTCCTT 147 Query 143089 GTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCAC 143148 ||| || || || || | | || | || || | | ||||| || | ||| | Sbjct 148 GTCCTGGATCTTCTGCTTCACATTCTCAATCGAATCAGAGCTCTCTACCTCCAAAGTGAT 207 Query 143149 CGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||||||||| ||||| || || ||||| || ||||| Sbjct 208 CGTCTTGCCAGTCAAGGTCTTGACGAAGATCTGCAT 243 >seq43562 Length=381 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016 |||||||| |||||| | || || || | || ||||| || || |||||||| ||| Sbjct 124 GCCTCCTCTTAAACGAAGCACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGC 183 Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 || |||| ||| ||||| || || ||||| |||||| ||| |||||||||||||| Sbjct 184 CAAGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGATCGGGAGG 243 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 ||||| || ||||| || || || |||| | || | | || | || || || Sbjct 244 AATGCCCTCCTTGTCCTGGATCTTCTGCTTTACATTCTCGATGCTATCAGAGGACTCGAC 303 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 |||| || | ||||| || ||||| |||||||| || || ||||| Sbjct 304 CTCAAGGGTAATGGTCTTTCCTGTCAAAGTTTTTACAAAGATCTGCAT 351 >seq17585 Length=2016 Score = 113 bits (124), Expect = 5e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 142976 ACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCG 143035 || || |||| |||||||| || || |||||||| ||| || |||| ||| ||| Sbjct 1169 ACCAAGTGAAGGGTAGATTCCTTCTGAATGTTGTAGTCGGCCAGGGTGCGACCGTCCTCG 1228 Query 143036 AGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTA 143095 || || || |||||| |||| || || |||||||| || || |||||||| ||||| | Sbjct 1229 AGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGATCAGGTGGGATGCCTTCCTTGTCCTGA 1288 Query 143096 ATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTG 143155 || || ||||| | | || | |||| | | || || |||| || | |||||| Sbjct 1289 ATCTTCTGTTTCACATTCTCGATGCTGTCAGAAGACTCCACCTCAAGGGTGATGGTCTTG 1348 Query 143156 CCGGTCAATGTTTTTACGAATATTTGCATA 143185 |||||||| || || ||||| || |||||| Sbjct 1349 CCGGTCAAGGTCTTGACGAAGATCTGCATA 1378 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCG-C 143015 |||||||| || || | ||| || || | |||||||| ||| | |||||||| ||| | Sbjct 1606 GCCTCCTCTTAGGCGAAGAACCAAGTGGAGGGTAGATTCCTTTGG-ATGTTGTAGTCGAC 1664 Query 143016 TCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 143075 || |||| ||| || || || || || ||| |||||| ||| ||||||||||||| Sbjct 1665 GCAGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAAACGCTGCTGATCGGGAG 1724 Query 143076 GTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTA 143135 | ||||| || ||||| || || || |||| | || | | || | || || | Sbjct 1725 GAATGCCCTCCTTGTCCTGGATCTTCTGCTTTACATTCTCGATGCTATCAGAGGACTCGA 1784 Query 143136 CTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 | |||| || | ||||| || ||||| |||||||| || || ||||| Sbjct 1785 CCTCAAGGGTAATGGTCTTTCCTGTCAAAGTTTTTACAAAGATCTGCAT 1833 >seq50001 Length=390 Score = 111 bits (122), Expect = 2e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 142976 ACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGAGTCTTC 143034 || || |||| |||||||| || || |||||||| || || |||| || | || || Sbjct 297 ACCAAGTGAAGGGTAGATTCCTTCTGAATGTTGTAGTCAGCCAGAGTGCGTCCA-TCCTC 239 Query 143035 GAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGT 143094 ||| || || || ||| |||||| ||| |||||||||||||| ||||| || ||||| Sbjct 238 GAGCTGCTTGCCGGCAAAGATCAAACGCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTG 179 Query 143095 AATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTT 143154 ||| || || |||| | || | || || | | || ||||| | || | ||||| Sbjct 178 AATCTTCTGCTTTACATTCTCAATCGAATCAGATGACTCCACTTCGAGGGTGATGGTCTT 119 Query 143155 GCCGGTCAATGTTTTTACGAATATTTGCAT 143184 |||||||||||| || || || || ||||| Sbjct 118 GCCGGTCAATGTCTTCACAAAGATCTGCAT 89 >seq23136 Length=1347 Score = 109 bits (120), Expect = 6e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016 |||||||| |||||| | || || || | || ||||| || || |||||||| ||| Sbjct 1138 GCCTCCTCTTAAACGAAGCACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGC 1079 Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 || |||| ||| ||||| || || ||||| |||||| ||| |||||||||||||| Sbjct 1078 CAAGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGATCGGGAGG 1019 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 ||||| || ||||| || || || |||| | || | |||||| | || || Sbjct 1018 AATGCCCTCCTTGTCCTGGATCTTCTGCTTTACATTCTCGATGCTGTCCGAGCTCTCAAC 959 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || | || | ||||| || ||||| || || ||||| || ||||| Sbjct 958 CTCGAGGGTGATGGTCTTACCAGTCAAAGTCTTGACGAAAATCTGCAT 911 >seq26564 Length=912 Score = 107 bits (118), Expect = 2e-18 Identities = 155/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 142970 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATC-GCTCATTGTGCTCGA 143028 ||||| || | ||| | ||||| || || || |||||||| || ||| | ||||| Sbjct 263 CGCAATACAAGATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCTGCT-AGTGTGCGGCC 205 Query 143029 GTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 143088 ||| ||||| ||||| || ||| |||| ||||||||||| || || || || || ||||| Sbjct 204 GTCCTCGAGCTGTTTGCCTGCAAAGATGAGACGTTGCTGGTCAGGGGGGATACCCTCTTT 145 Query 143089 GTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCAC 143148 ||| ||| || || || | | || | |||| | || || || |||| || | Sbjct 144 GTCTTGAATCTTCTGCTTCACATTCTCGATGCTGTCAGAGGACTCGACCTCAAGGGTAAT 85 Query 143149 CGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 |||||||| ||||| |||||||| || || ||||| Sbjct 84 GGTCTTGCCAGTCAAAGTTTTTACAAAGATCTGCAT 49 >seq17103 Length=3258 Score = 107 bits (118), Expect = 2e-18 Identities = 155/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 142970 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATC-GCTCATTGTGCTCGA 143028 ||||| || | ||| | ||||| || ||||| |||||||| || ||| | ||||| Sbjct 2544 CGCAATACAAGATGCAGAGTAGACTCCTTTTGGATGTTGTAGTCTGCT-AGTGTGCGGCC 2486 Query 143029 GTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 143088 || || || |||||||| ||| |||| |||||||||||||| || || || || || || Sbjct 2485 ATCCTCAAGCTGTTTACCGGCAAAGATAAGACGTTGCTGATCAGGGGGGATACCCTCCTT 2426 Query 143089 GTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCAC 143148 ||| ||| || || || | | || | || ||||| | || ||||| | || | Sbjct 2425 GTCTTGAATCTTCTGCTTCACATTCTCAATCGAGTCCGAGCTCTCCACTTCCAAGGTAAT 2366 Query 143149 CGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||||| || ||||| |||||||| || || ||||| Sbjct 2365 GGTCTTTCCTGTCAAAGTTTTTACAAAGATCTGCAT 2330 >seq25074 Length=2226 Score = 105 bits (116), Expect = 7e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 142976 ACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATC-GCTCATTGTGCTCGAGTCTTC 143034 || ||||| | |||||||| || || |||||||| || ||| | || | || || Sbjct 5 ACCAAATGCAGAGTAGATTCCTTCTGGATGTTGTAGTCAGCT-AGCGTACGGCCATCCTC 63 Query 143035 GAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGT 143094 || ||||| || || |||||||||| ||||| ||||| || ||||| || ||||| Sbjct 64 CAGCTGTTTGCCTGCGAAGATCAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTG 123 Query 143095 AATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTT 143154 ||| || ||||| | | ||| | | ||| | || || ||||| | ||| | |||||| Sbjct 124 AATCTTCTGTTTGACATTTTCAATAGAGTCAGAGGACTCCACTTCCAAAGTGATCGTCTT 183 Query 143155 GCCGGTCAATGTTTTTACGAATATTTGCAT 143184 |||||||| || || ||||| || ||||| Sbjct 184 GCCGGTCAGGGTCTTAACGAAGATCTGCAT 213 >seq49647 Length=441 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 142975 AACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTC 143034 ||| || |||| || || || || || |||||||| || || |||| ||| || Sbjct 193 AACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCAGCCAAGGTGCGGCCGTCCTC 252 Query 143035 GAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGT 143094 |||||| |||||||| ||||||||||||| || ||||| || ||||| || ||||| Sbjct 253 GAGTTGCTTACCAGCGAAGATCAGACGTTGTTGGTCGGGTGGAATGCCCTCCTTGTCCTG 312 Query 143095 AATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTT 143154 || ||||| || | | || | |||| | | ||| ||||| | ||| | ||||| Sbjct 313 GATCTTTTGCTTGACGTTCTCGATGCTGTCAGATGATTCAACTTCCAGAGTAATGGTCTT 372 Query 143155 GCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || || | |||||||| || |||||||| Sbjct 373 TCCAGTGAGCGTTTTTACAAAGATTTGCAT 402 >seq16312 Length=2383 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATC-GCT 143016 || |||| ||||| | || | |||| || || || || || |||||||| || ||| Sbjct 2310 CCACCTCTCAAACGAAGGACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCAGCT 2251 Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | ||||| || |||||||| |||||||| ||||||||||||| || ||||| || Sbjct 2250 -AGTGTGCGACCATCCTCGAGTTGCTTACCAGCGAAGATCAGACGTTGTTGGTCGGGTGG 2192 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 ||||| || ||||| || ||||| || | | || | |||| | | ||| || Sbjct 2191 AATGCCCTCCTTGTCCTGGATCTTTTGCTTGACGTTCTCGATGCTGTCAGATGATTCAAC 2132 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||| | ||| | ||||| || || | |||||||| || |||||||| Sbjct 2131 TTCCAGAGTAATGGTCTTTCCAGTGAGCGTTTTTACAAAGATTTGCAT 2084 >seq4039 Length=8492 Score = 102 bits (112), Expect = 8e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 142976 ACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCG 143035 || ||||||| || ||||| ||||| |||||||| || | |||| ||||| Sbjct 7296 ACCAAATGAAGAGTGGATTCCTTTTGGATGTTGTAGTCTGCAAGAGTGCGGCCATCTTCA 7237 Query 143036 AGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTA 143095 || || || || ||| |||||| |||||||||||| || || ||||| || ||||| Sbjct 7236 AGCTGCTTGCCGGCAAAGATCAAACGTTGCTGATCAGGGGGAATGCCCTCCTTGTCCTGG 7177 Query 143096 ATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTG 143155 || ||||| || | | ||| | | ||| | || ||| || || | || | ||||| Sbjct 7176 ATCTTTTGCTTGACGTTTTCAATAGAGTCAGAGGATTCCACCTCGAGGGTGATGGTCTTT 7117 Query 143156 CCGGTCAATGTTTTTACGAATATTTGCAT 143184 || ||||| || || ||||| |||||||| Sbjct 7116 CCAGTCAAAGTCTTCACGAAGATTTGCAT 7088 >seq21914 Length=1598 Score = 96.9 bits (106), Expect = 4e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016 ||| |||| ||||| | || || |||| |||||||| || || ||||| || || Sbjct 391 GCCACCTCTCAAACGAAGCACCAAGTGAAGGGTAGATTCCTTCTGGATGTTATAGTCAGC 332 Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | |||| || || || ||||| || ||| |||||| |||||||||||| || || Sbjct 331 AAGGGTGCGGCCATCCTCCAGCTGTTTGCCTGCAAAGATCAAACGTTGCTGATCAGGTGG 272 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 ||||| || ||||| || || || || | | ||| | | ||| | | || || Sbjct 271 GATGCCCTCCTTGTCCTGGATCTTCTGCTTGACGTTTTCGATTGAGTCAGAGCTCTCGAC 212 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||| | || | |||||||||||||| || || || || |||||||| Sbjct 211 TTCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACAAAGATTTGCAT 164 >seq3581 Length=10373 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 142969 ACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGA 143028 |||||| || || |||| || || || ||||| |||||||| || || |||| Sbjct 5485 ACGCAACACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCAGCCAGAGTGCGGCC 5426 Query 143029 GTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 143088 ||| ||||| || || || ||| ||||||||||||||||||| || || || || || || Sbjct 5425 GTCCTCGAGCTGCTTGCCGGCAAAGATCAGACGTTGCTGATCAGGGGGGATCCCCTCCTT 5366 Query 143089 GTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCAC 143148 ||| || || ||||| | | || | | ||| | | || ||||| | || | Sbjct 5365 GTCCTGGATCTTCTGTTTGACATTCTCAATAGAGTCAGAGCTCTCCACTTCCAAGGTGAT 5306 Query 143149 CGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 |||||||| || | || || ||||| || |||||| Sbjct 5305 GGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCATA 5269 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 142976 ACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCG 143035 || || |||| |||||||| || || |||||||| || || || | || ||| Sbjct 5250 ACCAAGTGAAGGGTAGATTCCTTCTGAATGTTGTAGTCAGCCAAGGTACGGCCATCCTCG 5191 Query 143036 AGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTA 143095 || || || || ||| ||||||||||||||||||| || || ||||| || || || | Sbjct 5190 AGCTGCTTGCCTGCAAAGATCAGACGTTGCTGATCAGGTGGGATGCCCTCCTTATCCTGA 5131 Query 143096 ATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTG 143155 || || || || | | ||| | | || | || || || |||| || | |||||| Sbjct 5130 ATCTTCTGCTTCACATTTTCAATGGAATCAGAGGACTCGACCTCAAGGGTGATGGTCTTG 5071 Query 143156 CCGGTCAATGTTTTTACGAATATTTGCAT 143184 || ||||| || || || || || ||||| Sbjct 5070 CCAGTCAAGGTCTTGACAAAGATCTGCAT 5042 >seq37486 Length=869 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047 |||||||| ||||| |||||||| || | |||| ||||| || ||||| || Sbjct 131 GTAGATTCCTTTTGGATGTTGTAGTCTGCAAGGGTGCGGCCATCTTCAAGCTGTTTGCCT 190 Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107 ||| | |||| ||||||||||| || || ||||| || ||||| || || || || Sbjct 191 GCAAAAATCAAGCGTTGCTGATCAGGGGGAATGCCCTCCTTGTCCTGGATCTTCTGCTTG 250 Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167 | | || | | || | | ||| ||||| | ||| | |||||||| |||||||| Sbjct 251 ACGTTCTCGATGCTATCAGAAGATTCGACTTCCAGAGTGATAGTCTTGCCAGTCAATGTC 310 Query 143168 TTTACGAATATTTGCAT 143184 || ||||| || ||||| Sbjct 311 TTGACGAAAATCTGCAT 327 >seq21227 Length=1716 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATC-GCT 143016 || |||| ||||| | || | |||| || || || || || |||||||| || ||| Sbjct 1546 CCACCTCTCAAACGAAGGACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCAGCT 1487 Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | ||||| || |||||||| |||||||| ||||||||||||| || ||||| || Sbjct 1486 -AGTGTGCGACCATCCTCGAGTTGCTTACCAGCGAAGATCAGACGTTGTTGGTCGGGTGG 1428 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 ||||| || ||||| || ||||| || | | || | | || | | || || Sbjct 1427 AATGCCCTCCTTGTCCTGGATCTTTTGCTTGACGTTCTCGATGCTATCAGAGCTCTCCAC 1368 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||| | ||| | ||||| || || | |||||||| || || ||||| Sbjct 1367 TTCCAGAGTGATGGTCTTTCCAGTGAGCGTTTTTACAAAGATCTGCAT 1320 >seq2 Length=13225 Score = 86.0 bits (94), Expect = 6e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 142955 TGGCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCG 143014 || ||||| || || | | || | ||| | || || || || || |||||||| ||| Sbjct 12959 TGTCCTCCACGCAATCTGAGCACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCG 13018 Query 143015 CTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 143074 || || | || || || || || || ||| |||||| ||| |||||||| || Sbjct 13019 GCCAAGGTACGACCATCCTCCAGCTGCTTGCCTGCAAAGATCAAACGCTGCTGATCAGGG 13078 Query 143075 GGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCT 143134 || ||||| || ||||| ||| || || || | | || | | ||| | || ||| Sbjct 13079 GGGATGCCCTCCTTGTCCTGAATCTTCTGCTTGACATTCTCAATAGAGTCTGAGGATTCC 13138 Query 143135 ACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||||| | || | |||||||||||| | || |||||||| || ||||| Sbjct 13139 ACTTCGAGGGTAATCGTCTTGCCGGTGAGCGTCTTTACGAAGATCTGCAT 13188 >seq20129 Length=615 Score = 84.2 bits (92), Expect = 2e-11 Identities = 101/136 (74%), Gaps = 1/136 (1%) Strand=Plus/Minus Query 143060 CGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACC 143119 ||||||||||| || || ||||| || ||||| ||| ||||| || | | ||| | Sbjct 615 CGTTGCTGATCAGGGGGAATGCCCTCCTTGTCCTGAATCTTTTGCTTGACGTTTTCAATA 556 Query 143120 GTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATT 143179 | ||| | || ||| || || | ||| | |||||| || ||||| ||||| ||||| ||| Sbjct 555 GAGTCTGAGGATTCCACCTCCAGAGTAATCGTCTTTCCAGTCAAAGTTTTCACGAAGATT 496 Query 143180 TGCATAG-CTTATGTT 143194 ||||| | ||||||| Sbjct 495 TGCATTGTGTTATGTT 480 >seq49985 Length=301 Score = 82.4 bits (90), Expect = 8e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 143030 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 143089 || || || || ||||||||| |||| || || || || ||||| || ||||| || ||| Sbjct 7 TCCTCCAGCTGCTTACCAGCAAAGATAAGGCGCTGTTGGTCGGGGGGAATGCCCTCCTTG 66 Query 143090 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACC 143149 || ||| || || || | | ||| | || ||| | |||||||| | || | Sbjct 67 TCCTGAATCTTCTGCTTGACGTTTTCGATCGAGTCAGAACTCTCTACTTCGAGGGTGATG 126 Query 143150 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 |||||||||||||| || || ||||| || ||||| Sbjct 127 GTCTTGCCGGTCAAGGTCTTGACGAAAATCTGCAT 161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506649387658080