Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20comandoni_20[genbank_20GCA_5F002025285.1_202017-03- 13] 57,594 sequences; 86,214,659 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq50001 113 4e-20 seq2 113 4e-20 seq21456 107 2e-18 seq43562 104 2e-17 seq3581 104 2e-17 seq49259 100 2e-16 seq17585 100 2e-16 seq23136 96.9 3e-15 seq23330 95.1 1e-14 seq38454 89.7 4e-13 seq10997 89.7 4e-13 seq5198 89.7 4e-13 seq4534 87.8 2e-12 seq110 87.8 2e-12 seq25074 86.0 5e-12 seq49354 84.2 2e-11 seq37486 84.2 2e-11 seq21227 84.2 2e-11 >seq50001 Length=390 Score = 113 bits (124), Expect = 4e-20 Identities = 153/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCT 48575 ||| || ||||| || ||||| ||||||||||| ||||||| | || || | |||| Sbjct 298 CACCAAGTGAAGGGTAGATTCCTTCTGAATGTTGTAGTCAGCCAGAGTG-CGTCCATCCT 240 Query 48576 CCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCA 48635 | |||||||| ||| | | || |||||||||||||| || | | ||||||||| Sbjct 239 CGAGCTGCTTGCCGGCAAAGATCAAACGCTGCTGATCGGGAGGGATGCCCTCCTTGTCCT 180 Query 48636 TAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTT 48695 ||| |||||||| | | | | || | ||| | |||||| |||| || ||||| | Sbjct 179 GAATCTTCTGCTTTACATTCTCAATCGAATCAGATGACTCCACTTCGAGGGTGATGGTCT 120 Query 48696 TACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 | ||||| | || |||||||| |||||||| Sbjct 119 TGCCGGTCAATGTCTTCACAAAGATCTGCAT 89 >seq2 Length=13225 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 ||||| ||||| || | ||| | ||| || ||| |||||| || |||||||| || ||| Sbjct 12962 CCTCCACGCAATCTGAGCACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCC 13021 Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619 || || | |||||||||||||| || | | || |||||||||||||| || Sbjct 13022 AAGGTACGACCATCCTCCAGCTGCTTGCCTGCAAAGATCAAACGCTGCTGATCAGGGGGG 13081 Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTC 48679 | | ||||||||| ||| |||||||||| | | | || | || | || ||| Sbjct 13082 ATGCCCTCCTTGTCCTGAATCTTCTGCTTGACATTCTCAATAGAGTCTGAGGATTCCACT 13141 Query 48680 TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 |||| || || || || |||||||| || || || || |||||||| Sbjct 13142 TCGAGGGTAATCGTCTTGCCGGTGAGCGTCTTTACGAAGATCTGCAT 13188 >seq21456 Length=1382 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 ||||| ||||| || | ||| |||||||| ||| |||||||| ||||||||||||||| Sbjct 703 CCTCCACGCAATCTGAGCACCAAATGAAGGGTGGATTCCTTTTGGATGTTGTAATCAGCC 644 Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619 | || ||||||| |||||||||||| | | || | ||||||||||| || Sbjct 643 AGGGTGCGGCCGTCCTCGAGCTGCTTACCGGCAAAGATGAGGCGCTGCTGATCAGGTGGA 584 Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTC 48679 | | ||||||||| || |||||||||| | | || | || | || || Sbjct 583 ATGCCCTCCTTGTCCTGGATCTTCTGCTTGACGTTCTCAATCGAGTCAGAGGATTCAACT 524 Query 48680 TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || | || ||||| || || || | || || |||||||||||||| Sbjct 523 TCCAAAGTGATGGTCTTGCCAGTCAATGTCTTGACAAAAATCTGCAT 477 >seq43562 Length=381 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576 ||| || || || ||| ||||| || |||||||| || ||||| || ||||||| Sbjct 142 CACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGCCAAGGTGCGGCCGTCCTC 201 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 |||||||| || || | || |||||||||||||| || | | ||||||||| Sbjct 202 GAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGATCGGGAGGAATGCCCTCCTTGTCCTG 261 Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696 || |||||||| | | | | ||| |||| | ||||| ||| | || ||||| || Sbjct 262 GATCTTCTGCTTTACATTCTCGATGCTATCAGAGGACTCGACCTCAAGGGTAATGGTCTT 321 Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || || | |||||| ||||| |||||||| Sbjct 322 TCCTGTCAAAGTTTTTACAAAGATCTGCAT 351 >seq3581 Length=10373 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 ||||| | ||| | | ||| || ||||| ||| ||||||||| |||||||| || ||| Sbjct 4580 CCTCCCCTCAAGCGAAGCACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGGCC 4521 Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619 || || ||||||| ||||||||||| || |||| | ||||||||||| || Sbjct 4520 AAGGTGCGGCCGTCCTCGAGCTGCTTACCAGCGAAAATAAGGCGCTGCTGATCAGGGGGA 4461 Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTC 48679 | | ||||| || ||| |||||||| | | | | ||| | || | ||||| Sbjct 4460 ATGCCCTCCTTATCTTGAATCTTCTGCTTCACATTCTCGATGCTGTCAGACGACTCGACT 4401 Query 48680 TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || | || || || ||||| ||||| || || || || |||||||| Sbjct 4400 TCCAGAGTAATAGTCTTACCAGTGAGGGTCTTGACGAAGATCTGCAT 4354 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576 ||| ||||| || || ||||||||| |||||||| || ||||| || ||||||| Sbjct 5023 CACCAAATGGAGGGTAGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCGTCCTC 4964 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 |||||||| || || | || ||||| || || || || | | ||||||||| Sbjct 4963 GAGCTGCTTGCCAGCGAAGATCAAACGTTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTG 4904 Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696 ||| |||||||||| | | || | || | ||||| ||| | || || || || Sbjct 4903 AATCTTCTGCTTGACGTTCTCGATCGAGTCAGAGGACTCGACCTCAAGGGTGATAGTCTT 4844 Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || || | || || || ||||||||||| Sbjct 4843 GCCAGTCAAGGTCTTGACGAAAATCTGCAT 4814 >seq49259 Length=868 Score = 100 bits (110), Expect = 2e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576 ||||||||| || || ||||||||| ||||||||||| ||||| || | ||||| Sbjct 262 CACTAAATGGAGGGTAGACTCCTTTTGGATGTTGTAATCGGCCAAGGTGCGGCCATCCTC 321 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 || |||||||| || | || | ||||||||| || || | | ||||| || Sbjct 322 AAGTTGCTTACCAGCGAAGATCAGACGCTGCTGGTCAGGGGGAATGCCCTCCTTATCTTG 381 Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696 ||| |||||||||| | || | || | || ||| ||||| || ||||| || Sbjct 382 AATCTTCTGCTTGACGTTTTCAATAGAGTCAGAGGATTCCACCTCGAGGGTAATGGTCTT 441 Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCATCGTGT 48731 || || | |||||| ||||| |||||||| |||| Sbjct 442 TCCAGTCAAAGTTTTTACAAAGATCTGCATAGTGT 476 >seq17585 Length=2016 Score = 100 bits (110), Expect = 2e-16 Identities = 118/160 (74%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576 ||| |||||||| ||| ||||||||| |||||||| || ||||| || ||||||| Sbjct 1852 CACCAAATGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCGTCCTC 1911 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 ||||||||||| || |||| | ||||||||||| || | || |||||||| Sbjct 1912 GAGCTGCTTACCAGCGAAAATAAGGCGCTGCTGATCAGGTGGAATACCCTCCTTGTCTTG 1971 Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCC 48676 ||| |||||||| | | | | ||| |||| | |||||| Sbjct 1972 AATCTTCTGCTTCACATTCTCGATGCTATCAGAGGACTCC 2011 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576 ||| || ||||| || ||||| ||||||||||| || |||| || ||||||| Sbjct 1168 CACCAAGTGAAGGGTAGATTCCTTCTGAATGTTGTAGTCGGCCAGGGTGCGACCGTCCTC 1227 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 |||||||| || | | || | ||||||||||| || | | |||||||||| Sbjct 1228 GAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGATCAGGTGGGATGCCTTCCTTGTCCTG 1287 Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696 ||| ||||| || | | | | ||| | || | ||||||| ||| | || ||||| || Sbjct 1288 AATCTTCTGTTTCACATTCTCGATGCTGTCAGAAGACTCCACCTCAAGGGTGATGGTCTT 1347 Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||||| | || || || || |||||||| Sbjct 1348 GCCGGTCAAGGTCTTGACGAAGATCTGCAT 1377 Score = 87.8 bits (96), Expect = 2e-12 Identities = 133/188 (71%), Gaps = 1/188 (1%) Strand=Plus/Plus Query 48540 TTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCTGCTTACCGCCGTAAATT 48598 |||| |||||||| || | | || || ||||||| |||||||| ||| | | || Sbjct 1646 TTTGGATGTTGTAGTCGACGCAGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATC 1705 Query 48599 AAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCT 48658 |||||||||||||| || | | ||||||||| || |||||||| | | | | Sbjct 1706 AAACGCTGCTGATCGGGAGGAATGCCCTCCTTGTCCTGGATCTTCTGCTTTACATTCTCG 1765 Query 48659 ATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAA 48718 ||| |||| | ||||| ||| | || ||||| || || || | |||||| ||||| Sbjct 1766 ATGCTATCAGAGGACTCGACCTCAAGGGTAATGGTCTTTCCTGTCAAAGTTTTTACAAAG 1825 Query 48719 ATCTGCAT 48726 |||||||| Sbjct 1826 ATCTGCAT 1833 >seq23136 Length=1347 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576 ||| || || || ||| ||||| || |||||||| || ||||| || ||||||| Sbjct 1120 CACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGCCAAGGTGCGGCCGTCCTC 1061 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 |||||||| || || | || |||||||||||||| || | | ||||||||| Sbjct 1060 GAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGATCGGGAGGAATGCCCTCCTTGTCCTG 1001 Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696 || |||||||| | | | | ||| | || | ||| ||||| || ||||| || Sbjct 1000 GATCTTCTGCTTTACATTCTCGATGCTGTCCGAGCTCTCAACCTCGAGGGTGATGGTCTT 941 Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCATCGT 48729 ||| || | ||| || || ||||||||||| || Sbjct 940 ACCAGTCAAAGTCTTGACGAAAATCTGCATTGT 908 >seq23330 Length=2255 Score = 95.1 bits (104), Expect = 1e-14 Identities = 155/223 (70%), Gaps = 13/223 (6%) Strand=Plus/Plus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576 ||| | |||||| ||| ||||||||||||||||| || ||||| || | ||||| Sbjct 1989 CACCAGATGAAGGGTGGATTCCTTTTGAATGTTGTAGTCGGCCAAGGTACGGCCATCCTC 2048 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 ||||||||| || | | || | |||||||||||| || | || |||||| ||| Sbjct 2049 CAGCTGCTTGCCTGCAAAGATGAGACGCTGCTGATCAGGTGGAATACCTTCCTTATCCTG 2108 Query 48637 AATTTTCTGCTTGA-----TAGACGCTAT----GG----TATCGGTAGACTCCGTCTCGA 48683 || |||||||| | | || ||||| || |||| | |||| ||||| Sbjct 2109 GATCTTCTGCTTCACATTCTCGATGCTATAAGAGGACTCTATCAGAGTACTCTACCTCGA 2168 Query 48684 CTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || ||||| || || || | |||||| ||||| |||||||| Sbjct 2169 GGGTAATGGTCTTTCCAGTCAAAGTTTTTACAAAGATCTGCAT 2211 >seq38454 Length=1327 Score = 89.7 bits (98), Expect = 4e-13 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 ||| ||||| | || | ||| |||||||| ||| ||||||||| |||||||||||||| Sbjct 612 ACCACCGCGAAGTCTGAGCACCAAATGAAGGGTGGACTCCTTTTGGATGTTGTAATCAGC 553 Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATC 48612 ||| ||| ||||||| |||||||| || || |||| | || || ||||| Sbjct 552 CAAAGTTCGTCCGTCCTCAAGCTGCTTGCCAGCGAAAATCAGGCGTTGTTGATC 499 >seq10997 Length=1659 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 |||||||| | ||| | ||| |||||||| ||| ||| || || |||||||| || ||| Sbjct 1346 CCTCCGCGAAGCCTGAGCACCAAATGAAGGGTGGACTCTTTCTGGATGTTGTAGTCGGCC 1405 Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619 || || ||||||| |||||||| || | | || |||||||||||||| || Sbjct 1406 AAGGTACGGCCGTCCTCAAGCTGCTTGCCTGCAAAGATCAAACGCTGCTGATCAGGTGGG 1465 Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTC 48679 | | |||||||| || ||||| || | | | | ||| | || | ||||| | Sbjct 1466 ATGCCCTCCTTGTCTTGGATCTTCTGTTTCACATTCTCGATGCTGTCAGAGGACTCGACC 1525 Query 48680 TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || | || || || || || || | || || || || |||||||| Sbjct 1526 TCAAGGGTGATAGTCTTGCCAGTCAAGGTCTTGACGAAGATCTGCAT 1572 >seq5198 Length=2209 Score = 89.7 bits (98), Expect = 4e-13 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 ||| ||||| | || | ||| |||||||| ||| ||||||||| |||||||||||||| Sbjct 1483 ACCACCGCGAAGTCTGAGCACCAAATGAAGGGTGGACTCCTTTTGGATGTTGTAATCAGC 1542 Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATC 48612 ||| ||| ||||||| |||||||| || || |||| | || || ||||| Sbjct 1543 CAAAGTTCGTCCGTCCTCAAGCTGCTTGCCAGCGAAAATCAGGCGTTGTTGATC 1596 >seq4534 Length=5043 Score = 87.8 bits (96), Expect = 2e-12 Identities = 155/226 (69%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCC 48577 |||| || |||||||||||||| || ||| ||||| |||| || | || || Sbjct 3460 ACTAGGTGCAGTGTGCTCTCCTTCTGGATGGAATAATCGGCCACCGTGCGTCCATCGTCG 3519 Query 48578 AGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATA 48637 || ||||| ||| | | || | ||||||||| || || | | |||||||||| Sbjct 3520 AGTTGCTTCCCGGCAAAGATCAGACGCTGCTGGTCGGGGGGGATGCCTTCCTTGTCCTGG 3579 Query 48638 ATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTA 48697 || || |||||||| | | ||| |||||| |||||| ||| | || || || || Sbjct 3580 ATCTTTTGCTTGATGTTCTCGATGCTATCGGAAGACTCGACCTCCAAGGTGATCGTCTTG 3639 Query 48698 CCGGTGAGAGTTTTCACAAAAATCTGCATCGTGTCTTGATCGAAGA 48743 || || || || || ||||| || ||||| || | ||||| ||| Sbjct 3640 CCTGTCAGTGTCTTGACAAAGATTTGCATGTTGACGGGATCGCAGA 3685 >seq110 Length=9649 Score = 87.8 bits (96), Expect = 2e-12 Identities = 161/236 (68%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 ||| || | ||| | | ||| || || ||||| ||||| || || |||||||| || Sbjct 71 ACCACCCCTCAAACGAAGCACCAAGTGGAGTGTAGATTCCTTCTGGATATTGTAATCGGC 130 Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 | || | ||||| ||||||||||| || | || | |||||||||||| || Sbjct 131 GAGGGTACGGCCATCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGATCAGGGGG 190 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678 | | ||||||||| ||| |||||||| | | | | ||| |||| | |||||| Sbjct 191 AATGCCCTCCTTGTCCTGAATCTTCTGCTTCACATTCTCGATGCTATCAGAGGACTCCAC 250 Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATCGTGTCTT 48734 ||| | || || || || || || | ||| ||||| || || ||||| ||| || Sbjct 251 CTCCAGGGTAATTGTCTTGCCAGTCAAAGTCTTCACGAAGATTTGCATGTTGTGTT 306 >seq25074 Length=2226 Score = 86.0 bits (94), Expect = 5e-12 Identities = 152/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCT 48575 ||| || || || ||| ||||||||| |||||||| || || || || || |||||| Sbjct 232 CACCAAGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCTGC-AAGGGTGCGACCGTCCT 290 Query 48576 CCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCA 48635 |||||||||| || || | || | |||||| ||||| || | | |||||||||| Sbjct 291 CCAGCTGCTTGCCAGCGAAGATCAGACGCTGTTGATCAGGTGGGATGCCTTCCTTGTCCT 350 Query 48636 TAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTT 48695 ||| || ||||||| | || | || | || ||| ||| | || | ||| | Sbjct 351 GAATCTTATGCTTGACGTTTTCAATAGAGTCTGAGGATTCCACCTCAAGAGTAACGGTCT 410 Query 48696 TACCGGTGAGAGTTTTCACAAAAATCTGCATCGTGTCTT 48734 | ||||| | ||| ||||| || || ||||| ||| || Sbjct 411 TTCCGGTCAAAGTCTTCACGAAGATTTGCATGTTGTGTT 449 >seq49354 Length=412 Score = 84.2 bits (92), Expect = 2e-11 Identities = 154/226 (68%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 ||||| | ||| | | ||| |||||||| || |||||| ||||||||||| || ||| Sbjct 187 CCTCCTCTCAAACGAAGCACCAAATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCGGCC 246 Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619 || || |||| || ||||| || || | | || | ||| || ||||| || Sbjct 247 AAGGTACGGCCGTCTTCAAGCTGTTTGCCTGCAAAGATCAGACGTTGTTGATCAGGTGGG 306 Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTC 48679 | | |||||||| ||| || ||||||| | | | || | || | || ||| Sbjct 307 ATGCCCTCCTTGTCTTGAATCTTTTGCTTGACATTCTCAATCGAGTCTGAGGATTCCACT 366 Query 48680 TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCA 48725 |||| || || || || || ||||| || ||||| |||||||||| Sbjct 367 TCGAGGGTAATCGTCTTGCCAGTGAGCGTCTTCACGAAAATCTGCA 412 >seq37486 Length=869 Score = 84.2 bits (92), Expect = 2e-11 Identities = 160/233 (69%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 ||||| | ||| | | ||| || || || ||| ||||| || |||||||| || || Sbjct 329 CCTCCTCTCAAACGAAGCACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCTGC- 387 Query 48560 AATTGT-CGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 || || || | |||||||||||||| || | | || | ||||||||||| || Sbjct 388 AAGGGTGCGACCATCCTCCAGCTGCTTGCCTGCAAAGATGAGGCGCTGCTGATCAGGGGG 447 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678 || | ||||||||| || |||||||||| | | | || | || | || ||| Sbjct 448 CATGCCCTCCTTGTCCTGGATCTTCTGCTTGACATTCTCGATAGAGTCCGAGGATTCCAC 507 Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATCGTGT 48731 ||||| || ||||| || || || | || || || || |||||||| |||| Sbjct 508 CTCGAGGGTGATGGTCTTTCCAGTCAATGTCTTGACGAAGATCTGCATTGTGT 560 >seq21227 Length=1716 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576 ||| ||||| || || |||||||| |||||||| ||||||| || | ||||| Sbjct 1301 CACCAAATGGAGAGTAGATTCCTTTTGGATGTTGTAGTCAGCCAGGGTGCGGCCATCCTC 1242 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 ||||||||||| || |||| | ||||| ||||| || | | |||||||| Sbjct 1241 GAGCTGCTTACCAGCGAAAATAAGGCGCTGTTGATCTGGGGGAATGCCCTCCTTGTCTTG 1182 Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696 || || ||||||| | | || | || | || ||| ||||| || ||||| || Sbjct 1181 GATCTTTTGCTTGACGTTCTCAATCGAGTCAGAGGATTCCACCTCGAGGGTAATGGTCTT 1122 Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCATCGTGTCTTG 48735 || || | ||| ||||| || || ||||| |||| ||| Sbjct 1121 TCCAGTCAAAGTCTTCACGAAGATTTGCATTGTGTGTTG 1083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420955512461594