Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20comandoni_20[genbank_20GCA_5F002025285.1_202017-03- 13] 57,594 sequences; 86,214,659 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq48723 120 3e-22 seq3581 118 9e-22 seq43562 116 3e-21 seq49354 114 1e-20 seq49259 113 4e-20 seq20128 107 2e-18 seq16312 104 2e-17 seq49647 102 7e-17 seq4534 102 7e-17 seq23136 100 2e-16 seq17585 98.7 9e-16 seq37486 96.9 3e-15 seq50001 95.1 1e-14 seq21914 95.1 1e-14 seq21227 95.1 1e-14 seq23330 89.7 4e-13 seq26564 84.2 2e-11 >seq48723 Length=522 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||||||||| || |||||||| | |||||| |||| || || || Sbjct 510 ATGCAGATCTTTGTAAAAACTTTGACTGGAAAGACCATTACCCTCGAGGTGGAATCCTCT 451 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||| | || || | ||||| || |||||| || || || ||||| || || |||||| Sbjct 450 GACTCTATTGAAAACGTCAAGCAGAAGATTCAAGATAAGGAGGGCATTCCCCCTGATCAA 391 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | || || | || |||||||| || ||||||| | | | | || || ||| Sbjct 390 CAGCGCCTTATCTTCGCTGGCAAGCAGCTTGAAGATGGCCGCACTCTTGCAGACTACAAC 331 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGAC 24219 || ||||| ||||| || ||||||| ||| | ||| || | ||||||| Sbjct 330 ATCCAAAAGGAATCCACTCTTCATTTGGTGCTCAGACTGCGTGGAGGAC 282 >seq3581 Length=10373 Score = 118 bits (130), Expect = 9e-22 Identities = 167/231 (72%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||||||||| || |||||||| | |||||| |||| || ||| | Sbjct 4582 ATGCAGATCTTTGTAAAAACTTTGACTGGAAAGACCATTACCCTCGAGGTGGAGTCTTCT 4641 Query 24051 GACACCATCGAGCAAGTCAAA-CAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 |||| ||||||| | |||||| ||||||||| ||||| || || || || || ||||| Sbjct 4642 GACAGCATCGAGAACGTCAAAGCAAAAGATTCAAGACAAGGAGGGTATTCCCCCTGATCA 4701 Query 24110 -ACAGAGACTGA--TTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166 |||| | || | || || |||||||| ||||| || | | | | | || || || Sbjct 4702 GACAGCGCCTCAATCTTTCGCTGGCAAGCAGCTCGAGGACGGCCGTACCCTCGCTGACTA 4761 Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| || || |||||||| |||| || ||| | | || |||||||| Sbjct 4762 CAACATCCAGAAGGAATCTACCCTTCACTTGGTGCTTCGCTTAAGAGGAGG 4812 >seq43562 Length=381 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||||||||| || || ||||| | |||||| | || |||||| || Sbjct 351 ATGCAGATCTTTGTAAAAACTTTGACAGGAAAGACCATTACCCTTGAGGTCGAGTCCTCT 292 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || | ||||||| | || || || ||||| ||||| || ||||| ||||||||||| Sbjct 291 GATAGCATCGAGAATGTAAAGCAGAAGATCCAGGACAAGGAGGGCATTCCTCCCGATCAG 232 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | |||| | || |||||||| ||||| || | | | | | | ||| || ||| Sbjct 231 CAGCGTTTGATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGCACCTTGGCCGACTACAAC 172 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || || || ||||| || | || || ||| | | || |||||||| Sbjct 171 ATCCAGAAGGAATCCACCCTCCACTTGGTGCTTCGTTTAAGAGGAGG 125 >seq49354 Length=412 Score = 114 bits (126), Expect = 1e-20 Identities = 161/226 (71%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 23992 TGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACG 24051 |||| | || || || || | ||||| || |||||||| ||||||| || || | Sbjct 412 TGCAGATTTTCGTGAAGACGCTCACTGGCAAGACGATTACCCTCGAAGTGGAATCCTCAG 353 Query 24052 ACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAAC 24111 || | || ||| | ||||| ||||||||| ||||| || ||||| || || ||||||| Sbjct 352 ACTCGATTGAGAATGTCAAGCAAAAGATTCAAGACAAGGAGGGCATCCCACCTGATCAAC 293 Query 24112 AGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACA 24171 | | ||||| | | ||||| || || ||||| | | | | | | ||| || |||| Sbjct 292 AACGTCTGATCTTTGCAGGCAAACAGCTTGAAGACGGCCGTACCTTGGCCGACTACAACA 233 Query 24172 TTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 |||| || || ||||| ||||||| ||| | | ||||||||||| Sbjct 232 TTCAGAAGGAGTCTACTCTTCATTTGGTGCTTCGTTTGAGAGGAGG 187 >seq49259 Length=868 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||||||||| || |||||||| | |||||| |||| || || || Sbjct 471 ATGCAGATCTTTGTAAAAACTTTGACTGGAAAGACCATTACCCTCGAGGTGGAATCCTCT 412 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||| | || || | ||||| || |||||| || || || ||||| || || || || Sbjct 411 GACTCTATTGAAAACGTCAAGCAGAAGATTCAAGATAAGGAGGGCATTCCCCCTGACCAG 352 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | ||||| | || || |||||||| || |||| | | | | | |||||| ||| Sbjct 351 CAGCGTCTGATCTTCGCTGGTAAGCAACTTGAGGATGGCCGCACCTTGGCCGATTACAAC 292 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTG 24200 || ||||| || ||||| | ||||||||| Sbjct 291 ATCCAAAAGGAGTCTACCCTCCATTTAGTG 262 >seq20128 Length=1734 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| ||||| || ||||| || |||||||| | ||||| ||| | Sbjct 1317 ATGCAGATCTTTGTCAAAACTTTGACTGGCAAGACGATTACCCTTGAAGTGGAGAGCTCT 1376 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || | ||||||| | || || || |||||| || || || ||||| || || || || Sbjct 1377 GATAGCATCGAGAATGTGAAGCAGAAGATTCAAGATAAGGAGGGCATCCCCCCTGACCAG 1436 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | || || | | ||||| || || || |||| | | | | || ||| || ||| Sbjct 1437 CAGCGTCTCATCTTTGCAGGCAAACAGCTTGAGGATGGCCGCACCCTCGCCGACTACAAC 1496 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 |||||||| |||||||| |||| | ||| | | |||||||||| Sbjct 1497 ATTCAAAAGGAATCTACCCTTCACCTCGTGCTGCGCCTGAGAGGAGG 1543 >seq16312 Length=2383 Score = 104 bits (114), Expect = 2e-17 Identities = 117/157 (75%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||||||||| | |||||||| | ||||| | ||||| || | Sbjct 2084 ATGCAAATCTTTGTAAAAACGCTCACTGGAAAGACCATTACTCTGGAAGTTGAATCATCT 2143 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||| ||||||| | ||||| |||||||| ||||| || ||||| || ||||| ||| Sbjct 2144 GACAGCATCGAGAACGTCAAGCAAAAGATCCAGGACAAGGAGGGCATTCCACCCGACCAA 2203 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATG 24147 || | ||||| | || || ||||||||||| |||| Sbjct 2204 CAACGTCTGATCTTCGCTGGTAAGCAACTCGAGGATG 2240 Score = 89.7 bits (98), Expect = 4e-13 Identities = 141/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 23986 ACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGG 24045 |||| |||||| | || || || || || |||||||| | || ||| |||| || || Sbjct 1851 ACAACATGCAAATCTTCGTGAAGACTTTGACTGGAAAGACCATCACCCTCGAGGTGGAAT 1910 Query 24046 CCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCG 24105 || ||| | || || | || || || |||||| ||||| || ||||| || || | Sbjct 1911 CCTCTGACTCTATTGAAAACGTGAAGCAGAAGATTCAAGACAAGGAGGGCATCCCACCTG 1970 Query 24106 ATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATT 24165 |||| ||| | || || | | ||||| || || || |||| | | | | || || | Sbjct 1971 ATCAGCAGCGTCTCATCTTTGCAGGCAAACAGCTGGAGGATGGCCGCACCCTCGCTGACT 2030 Query 24166 ATAACATTCAAAAAGAATCTAC 24187 | ||||||||||| |||||||| Sbjct 2031 ACAACATTCAAAAGGAATCTAC 2052 >seq49647 Length=441 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||||||||| | |||||||| | ||||| | ||||| || | Sbjct 402 ATGCAAATCTTTGTAAAAACGCTCACTGGAAAGACCATTACTCTGGAAGTTGAATCATCT 343 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||| ||||||| | ||||| |||||||| ||||| || ||||| || ||||| ||| Sbjct 342 GACAGCATCGAGAACGTCAAGCAAAAGATCCAGGACAAGGAGGGCATTCCACCCGACCAA 283 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | ||||| | || || ||||||||||| || | | | | | | || || ||| Sbjct 282 CAACGTCTGATCTTCGCTGGTAAGCAACTCGAGGACGGCCGCACCTTGGCTGACTACAAC 223 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGT 24199 || || || || || || |||| || || Sbjct 222 ATCCAGAAGGAGTCCACTCTTCACTTGGT 194 >seq4534 Length=5043 Score = 102 bits (112), Expect = 7e-17 Identities = 119/161 (74%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 ||| |||||| | ||||| || ||| | || || || |||| ||| | || |||||| | Sbjct 3672 CAACATGCAAATCTTTGTCAAGACACTGACAGGCAAGACGATCACCTTGGAGGTCGAGTC 3613 Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 ||| | ||||||| | |||| |||||||| ||||| |||||||| || ||||| Sbjct 3612 TTCCGATAGCATCGAGAACATCAAGCAAAAGATCCAGGACAAGGAAGGCATCCCCCCCGA 3553 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATG 24147 || ||| | ||||| | | ||| ||||||||||| |||| Sbjct 3552 CCAGCAGCGTCTGATCTTTGCCGGGAAGCAACTCGACGATG 3512 >seq23136 Length=1347 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | || || || || || ||||| || | || ||| |||| || ||| | Sbjct 910 AATGCAGATTTTCGTCAAGACTTTGACTGGTAAGACCATCACCCTCGAGGTTGAGAGCTC 969 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 |||| ||||||| | || || || ||||| ||||| || ||||| ||||||||||| Sbjct 970 GGACAGCATCGAGAATGTAAAGCAGAAGATCCAGGACAAGGAGGGCATTCCTCCCGATCA 1029 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||| | |||| | || |||||||| ||||| || | | | | | | ||| || || Sbjct 1030 GCAGCGTTTGATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGCACCTTGGCCGACTACAA 1089 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||| || || ||||| || | || || ||| | | || |||||||| Sbjct 1090 CATCCAGAAGGAATCCACCCTCCACTTGGTGCTTCGTTTAAGAGGAGG 1137 >seq17585 Length=2016 Score = 98.7 bits (108), Expect = 9e-16 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||||||||| || || ||||| | |||||| | || |||||| || Sbjct 1833 ATGCAGATCTTTGTAAAAACTTTGACAGGAAAGACCATTACCCTTGAGGTCGAGTCCTCT 1774 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || | ||||||| | || || || ||||| ||||| || ||||| ||||||||||| Sbjct 1773 GATAGCATCGAGAATGTAAAGCAGAAGATCCAGGACAAGGAGGGCATTCCTCCCGATCAG 1714 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAG-AAACGTCAGCGATTATAA 24169 ||| | |||| | | ||||||||| || || || | | | | | | ||| || || Sbjct 1713 CAGCGTTTGATCTTTGCCGGCAAGCAGCTTGAGGACGGCCGCACTCTGCGTCGACTACAA 1654 Query 24170 CATTCAAAAAGAATCTAC 24187 || || ||| |||||||| Sbjct 1653 CA-TCCAAAGGAATCTAC 1637 >seq37486 Length=869 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 23985 AACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAG 24044 |||| |||||| | || || || ||||| |||||||| | || ||| |||| || || Sbjct 561 AACACAATGCAGATCTTCGTCAAGACATTGACTGGAAAGACCATCACCCTCGAGGTGGAA 502 Query 24045 GCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCC 24104 || ||| | |||||| | ||||| || ||||| ||||| || ||||| || || Sbjct 501 TCCTCGGACTCTATCGAGAATGTCAAGCAGAAGATCCAGGACAAGGAGGGCATGCCCCCT 442 Query 24105 GATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGAT 24164 ||||| ||| | || || | | |||||||| || || |||| | | | | || Sbjct 441 GATCAGCAGCGCCTCATCTTTGCAGGCAAGCAGCTGGAGGATGGTCGCACCCTTGCAGAC 382 Query 24165 TATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || ||||| || || ||||| || | || || ||| | | ||||||||||| Sbjct 381 TACAACATCCAGAAGGAATCCACCCTCCACTTGGTGCTTCGTTTGAGAGGAGG 329 >seq50001 Length=390 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || ||||| || || || | || ||| ||||||| ||| | Sbjct 89 ATGCAGATCTTTGTGAAGACATTGACCGGCAAGACCATCACCCTCGAAGTGGAGTCATCT 148 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || | || ||| | || || || |||||| ||||| || ||||| ||||||||||| Sbjct 149 GATTCGATTGAGAATGTAAAGCAGAAGATTCAGGACAAGGAGGGCATCCCTCCCGATCAG 208 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | |||| | | ||||||||| ||||| |||| | | | || || ||| Sbjct 209 CAGCGTTTGATCTTTGCCGGCAAGCAGCTCGAGGATGGACGCACTCTGGCTGACTACAAC 268 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTG 24200 ||||| || |||||||| |||| || ||| Sbjct 269 ATTCAGAAGGAATCTACCCTTCACTTGGTG 298 >seq21914 Length=1598 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| || || || || || || | || ||| ||||||||||| | Sbjct 164 ATGCAAATCTTTGTGAAGACCTTGACCGGCAAGACCATCACCCTCGAAGTCGAGAGCTCT 223 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||| | ||||| | ||||| || ||||| ||||| || ||||| || || ||||| Sbjct 224 GACTCAATCGAAAACGTCAAGCAGAAGATCCAGGACAAGGAGGGCATCCCACCTGATCAG 283 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | |||| | | ||||| || || || |||| | | | | | || |||||| Sbjct 284 CAACGTTTGATCTTTGCAGGCAAACAGCTGGAGGATGGCCGCACCCTTGCTGACTATAAC 343 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || || || |||||||| |||| || ||| | | |||||||| || Sbjct 344 ATCCAGAAGGAATCTACCCTTCACTTGGTGCTTCGTTTGAGAGGTGG 390 >seq21227 Length=1716 Score = 95.1 bits (104), Expect = 1e-14 Identities = 115/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||||||||| | |||||||| | || || | ||||| ||| | Sbjct 1320 ATGCAGATCTTTGTAAAAACGCTCACTGGAAAGACCATCACTCTGGAAGTGGAGAGCTCT 1379 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || | ||||||| | ||||| |||||||| ||||| || ||||| || ||||| ||| Sbjct 1380 GATAGCATCGAGAACGTCAAGCAAAAGATCCAGGACAAGGAGGGCATTCCACCCGACCAA 1439 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATG 24147 || | ||||| | || || ||||||||||| |||| Sbjct 1440 CAACGTCTGATCTTCGCTGGTAAGCAACTCGAGGATG 1476 >seq23330 Length=2255 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || | ||||| || | || || | ||||| ||| | Sbjct 1970 ATGCAGATCTTTGTGAAGACGCTCACTGGCAAGACTATCACTTTGGAAGTGGAGAGCTCT 1911 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||| | |||||| | ||||| || ||||| ||||| || ||||| || || |||||| Sbjct 1910 GACTCAATCGAGAACGTCAAGCAGAAGATCCAGGACAAGGAGGGCATTCCCCCTGATCAA 1851 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | || || | | ||||||||||||||||||| | | | | || || ||| Sbjct 1850 CAGCGCCTCATCTTTGCAGGCAAGCAACTCGAAGATGGTCGCACCCTGGCAGACTACAAC 1791 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGAC 24219 || || || || || || | ||| | ||| | |||||| | || |||| Sbjct 1790 ATCCAGAAGGAGTCCACTCTCCATCTGGTGCTTAGATTGCGTGGTGGAC 1742 >seq26564 Length=912 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||||||||| || ||||| || | |||||| | || |||||| || Sbjct 49 ATGCAGATCTTTGTAAAAACTTTGACTGGCAAGACCATTACCCTTGAGGTCGAGTCCTCT 108 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||| ||||||| | || || || |||||| |||||||| || || || || || || Sbjct 109 GACAGCATCGAGAATGTGAAGCAGAAGATTCAAGACAAAGAGGGTATCCCCCCTGACCAG 168 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATAA 24169 || | || || | | ||||| || ||||| || | | | || ||| || || || Sbjct 169 CAACGTCTCATCTTTGCAGGCAAACAGCTCGAGGACGGCCG-CACACTAGCAGACTACAA 227 Query 24170 CATTCAAAAAGAATCTAC 24187 ||| || || || ||||| Sbjct 228 CATCCAGAAGGAGTCTAC 245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429634216367070