Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20comandoni_20[genbank_20GCA_5F002025285.1_202017-03- 13] 57,594 sequences; 86,214,659 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq310 300 3e-76 seq663 259 9e-64 seq24165 248 2e-60 seq5862 224 2e-53 seq35896 187 5e-42 seq24166 185 2e-41 >seq310 Length=11085 Score = 300 bits (332), Expect = 3e-76 Identities = 1025/1573 (65%), Gaps = 47/1573 (3%) Strand=Plus/Plus Query 243877 GTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGGCCATGGTGATGAGGTC 243936 ||||||| |||||| ||||||| | | | || || || || |||||| | ||| Sbjct 301 GTTGAGGCTCTGGCTTTGGTCGATGTACGCGGCTCGGTCAGCTGCCATGTCCAAGAGAAT 360 Query 243937 CTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGT-GCTCGGGGAACCCTT 243995 ||||| ||||| | | || ||||| | | ||||||| | ||| ||| | | | | Sbjct 361 ACGCTGAGGAATCTCCCAAACAGTTTTGTAAAGGCGCTTGAGCTCGCTAGGG-ATCTCGT 419 Query 243996 CGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGCATGTTATCGTTCCACA 244055 | ||| ||||| ||||| |||||| ||||||||| | | |||| || |||||||| Sbjct 420 CTATGGCTTGCACAGAGCCATTGTGGGCGATGAGCTTGTTCTTCATGGCATGGTTCCACA 479 Query 244056 GGCCCAAGCGCTCCAGCGCCTC-GACCAGGTGCCTGTTCACCACCTGAAACTCTCCCGAC 244114 |||||| | | ||| | ||| || || ||| ||| | |||| ||| ||||| | | Sbjct 480 GGCCCAGGTCCATCAG-GTCTCTGAGCAAGTGTTCGTTGATCACCGTAAAGTCTCCGGCC 538 Query 244115 AGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCCCAGT 244174 | | ||| | ||||| ||| || ||||| | || ||| |||| |||||| Sbjct 539 AAGATGCGCCTTGTGTAGATATTGGACGTGTAGGGCTCAAAGCACTCATTGTTTCCCAGT 598 Query 244175 ATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCCGTGC 244234 ||||| | || || |||||||| |||| || || | || || | || |||||| Sbjct 599 ATCTGGGAAGTAGAAGCCGTCGGCATAGGCGCGACAAGTAAGCTATTTCGCAGACCGTGC 658 Query 244235 CTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGCCCGAGAGGTCCTCGCGTTTG 244294 | |||| |||| ||| ||||| || |||| | || | | Sbjct 659 TCCACAATGCTTGCCTTGAGGGACGCCCAATCCCAA-----CGGGAGGA--TGGC--TCG 709 Query 244295 AGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGG 244354 | ||||||||||||||| || || || ||||| ||| ||| | | || ||| Sbjct 710 ACATTCCACATGTCAAACTGAAGTAGACCTTTGCTCGTGGGAGAGCCGGCAAATGTGGGG 769 Query 244355 TAGGGACCGTCGCGCTGGGCCAGCTTAC-AGCTCTCGTCGAGGGCGGCGTAGTAGATGGT 244413 ||||| || | || ||||||| | || | || ||||||||| ||||||| || Sbjct 770 TAGGGCCCTTGCTCCTTTGCCAGCTCATTAGATGATGT-GAGGGCGGCAAAGTAGATTGT 828 Query 244414 CTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGTGAAGGGGATGCCCATCAT 244473 ||| || || ||| | | |||| |||| ||| | | || |||| || | Sbjct 829 CTCAAAAATGTCGCGGTTGAGGGCGCGTGCCTCTTCGCTGTCCCAAGGCATGCGCAAGAG 888 Query 244474 CATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGA 244533 | ||||||||| || || ||||| ||||| | ||| ||||| ||||| || ||||||| Sbjct 889 AAGGAAGACGTCAGCTAGGCCCTGTACGCCAAGGCCAATGGGCCTGTGGCGTCTGTTGGA 948 Query 244534 GCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCGGGT 244593 | || |||||| || || ||||| ||||| |||| ||||||||||| | |||||| || Sbjct 949 GTGCTCGGCTTCTGGAACTGGGTAGTAGTTGACGTCTATCACCTTGTTCAAGTTGCGCGT 1008 Query 244594 GATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCCTCGGCGAT 244653 || || ||| || || ||| || | || || ||| | | | Sbjct 1009 GACCACCTTGACCACCTCAAAGAGCTTCTCATGATCAAAC--------ATCATTTTC--T 1058 Query 244654 GGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCTC 244713 | || |||||| | | | || | || || || || |||||||| || | Sbjct 1059 CCTTGTC--CACAAATTTGGGCAAAGCCATTGAAGCAAGATTACACACGGCCACTTCTTT 1116 Query 244714 CGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTG 244773 | ||| |||||||||| || || || ||||| || | |||||||| ||||| Sbjct 1117 GGGTGATGTGAACTGGACAATTTCAGTACAAAGGTTGGAACATTGAATGGTGCCGAGGTG 1176 Query 244774 CTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTC 244833 ||| || ||||| || ||||||||| ||||||||||||||| | || || ||||| Sbjct 1177 CTGATGGTTGGATTTCGCGTTGCAGTGGTCCTTGTAGAGCATATAAGGAGTACCAGTCTC 1236 Query 244834 GAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCTT 244893 | ||||| | | || ||| || || |||||||| | | | ||| Sbjct 1237 TATTTGGGCCTCCAAGATAGCAAACCAAAGCTCTTGGGCCTTGACAGCACGCCTTGCCCG 1296 Query 244894 GCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCT-- 244951 |||||| ||| ||||| |||||||| |||| || || | ||||| || |||| Sbjct 1297 GCCCTCGCGCTCATAGCGTGTGTACAGCTCCTCAAATTCAGCTCCCCA---CTTGTCTTG 1353 Query 244952 -AGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTG 245010 || || || | ||||| | || ||| || || ||| ||| || |||| Sbjct 1354 AAGACCTGGTGCCTCATTGGGGCAAAACAGTGACCAGTCTCCTCCGGCCTCCACTCTCTC 1413 Query 245011 CATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGA 245070 |||||| || ||||| | ||| || || | |||||| || |||| | |||||| ||| Sbjct 1414 CATGAACAGATCGGGTACCCACAGAGCATAGAAGAGATCTCTGGCTCGCTGCTCTTCCTT 1473 Query 245071 GCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTA 245130 ||| |||||| ||||||||||||| ||||||| ||| ||||||| ||||||| || Sbjct 1474 GCCGTGGTTCTTTTTCAGCTCCAAAAACTCAAAGATGTCCGCGTGCCAAGGCTCCAGATA 1533 Query 245131 GACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCAC-CATCCTCTCGAGCGCGT 245189 || || | || || | |||| || || || || || | | | | | ||| Sbjct 1534 GATTGCAAATGCTCCCTTTCTCTTGCCACCACCTTGATCTACGTAGCGTGCTGTG-TCGT 1592 Query 245190 TGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGG 245249 || | | |||| | || | || ||||| || |||||| |||||| ||||||| Sbjct 1593 TGTACACTCGCAACATTGGAATTAGACCGTTGGACGTGCCGTTCGTGCCCCTGATGTA-- 1650 Query 245250 CGCCCTTGC-CCCTGAGGTTGCTGATGGACA-TG---CCTAGTCCGCCGGCGTGCTTGGA 245304 || | || | || || || || ||| || |||| ||| ||||| |||||| Sbjct 1651 CGAGTTAGCAGCACGAATTT--TG-TGCACACTGAGACCTATTCCTCCGGCACTCTTGGA 1707 Query 245305 GATGAGGGCGCAGCTCTTGATG-GTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGT 245363 || | || || || || | | ||||| ||| || || |||||||| | ||||| Sbjct 1708 AATCAAAGCACA-CTGTTTAAGTGTGTCATATATCCCTTCTATGCTGTCTTCTTGCATGT 1766 Query 245364 TGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGC 245423 | | |||||||| || || ||||| ||| | || ||| | ||||| || ||||| Sbjct 1767 TAACGAGAAAGCACGAAGAAAGCTGTGGCCTTGGCGTGCCAGCATTGAAAAGTGTGGGAG 1826 Query 245424 TGGCGTGGGTAAA 245436 |||| || || || Sbjct 1827 TGGCATGAGTGAA 1839 >seq663 Length=3190 Score = 259 bits (286), Expect = 9e-64 Identities = 1023/1579 (65%), Gaps = 59/1579 (4%) Strand=Plus/Minus Query 243877 GTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGGCCATGGTGATGAGGTC 243936 ||||||| |||||| ||||||| | | | || || || || |||||| | ||| Sbjct 3071 GTTGAGGCTCTGGCTTTGGTCGATGTACGCGGCTCGGTCAGCTGCCATGTCCAAGAGAAT 3012 Query 243937 CTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGT-GCTCGGGGAACCCTT 243995 ||||| ||||| | | || ||||| | | ||||||| | ||| ||| | | | | Sbjct 3011 ACGCTGAGGAATCTCCCAAACAGTTTTGTAAAGGCGCTTGAGCTCGCTAGGG-ATCTCGT 2953 Query 243996 CGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGCATGTTATCGTTCCACA 244055 | ||| ||||| ||||| |||||| ||||||||| | | |||| || |||||||| Sbjct 2952 CTATGGCTTGCACAGAGCCATTGTGGGCGATGAGCTTGTTCTTCATGGCATGGTTCCACA 2893 Query 244056 GGCCCAAGCGCTCCAGCGCCTC-GACCAGGTGCCTGTTCACCACCTGAAACTCTCCCGAC 244114 |||||| | | ||| | ||| || || ||| ||| | |||| ||| ||||| | | Sbjct 2892 GGCCCAGGTCCATCAG-GTCTCTGAGCAAGTGTTCGTTGATCACCGTAAAGTCTCCGGCC 2834 Query 244115 AGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCCCAGT 244174 | | ||| | ||||| |||| || ||||| | || ||| |||| |||||| Sbjct 2833 AAGATGCGCCTTGTGTAGATGTTGGAAGTGTAGGGCTCAAAGCACTCATTGTTTCCCAGT 2774 Query 244175 ATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCCGTGC 244234 ||||| | || || |||||||| || | || || | || || | || ||||||| Sbjct 2773 ATCTGGGAAGTAGAAGCCGTCGGCATAGGTGCGACAAGTAAGCTATTTCGCAGGCCGTGC 2714 Query 244235 CTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGCCCGAGAGGTCCTCGCGTTTG 244294 | |||| |||| ||| ||||| || |||| | || | Sbjct 2713 TCCACAATGCTTGCCTTGAGGGACGCCCAATCCCAA-----CGGGAGGA--TGGC--TCA 2663 Query 244295 AGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGG 244354 | |||||| |||||||| || || || ||||| ||| ||| | | || ||| Sbjct 2662 ACATTCCACATATCAAACTGAAGAAGACCTTTGCTCGAGGGAGAGCCGGCAAATGTGGGG 2603 Query 244355 TAGGGACCGTCGCGCTGGGCCAGCTTAC-AGCTCTCGTCGAGGGCGGCGTAGTAGATGGT 244413 ||||| || | || ||||||| | || | || ||||||||| ||||||| || Sbjct 2602 TAGGGCCCTTGCTCCTTTGCCAGCTCATTAGATGATGT-GAGGGCGGCAAAGTAGATTGT 2544 Query 244414 CTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGTGAAGGGGATGCCCATCAT 244473 ||| || || ||| | | |||| |||| | | | || |||| || | Sbjct 2543 CTCAAAAATGTCGCGGTTGAGGGCGCGTGCCTCTTCACTATCCCAAGGCATGCGCAAGAG 2484 Query 244474 CATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGA 244533 | ||||||||| || || ||||| ||||| | || ||||| ||||| || ||||||| Sbjct 2483 AAGGAAGACGTCAGCTAGGCCCTGTACGCCAAGACCAATGGGCCTGTGACGTCTGTTGGA 2424 Query 244534 GCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCGGGT 244593 | || |||||| || || ||||| ||||| |||| ||||||||||| | |||||| || Sbjct 2423 GTGCTCGGCTTCTGGAACTGGGTAGTAGTTGACGTCTATCACCTTGTTCAAGTTGCGCGT 2364 Query 244594 GATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCCTCGGCGAT 244653 || || ||| || || ||| || | || || ||| | | | Sbjct 2363 GACCACCTTGACCACCTCAAAGAGCTTCTCATGATCAAAC--------ATCATTTTC--T 2314 Query 244654 GGTGATCCTCACAAACTCGTTGAGGGCGACGC---TG--GCCAGGTTGCAGACGGCCACC 244708 | || |||||| || | ||| | || || || || || || |||||||| Sbjct 2313 CCTTGTC--CACAAA----TTTA-GGCAAAGCCATTGAAGCAAGATTACATACGGCCACT 2261 Query 244709 TCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCC 244768 || | | ||| |||||||||| ||||| || ||||| || | |||||||| Sbjct 2260 TCTTTGGGTGATGTGAACTGGACAATTTCGGTACAAAGGTTGGAACATTGAATGGTGCCG 2201 Query 244769 AGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCG 244828 |||||||| || ||||| || ||||||||| ||| ||||||||||| | || || Sbjct 2200 AGGTGCTGATGGTTGGATTTCGCGTTGCAGTGGTCTTTGTAGAGCATATAAGGAGTACCA 2141 Query 244829 GTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGA 244888 ||||| | || || | | || ||| || || |||||||| | | | Sbjct 2140 GTCTCTATTTGAGCCTCCAAGATAGCAAACCAAAGCTCTTGGGCCTTGACAGCACGCCTT 2081 Query 244889 GCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCG 244948 ||| |||||| ||| ||||| |||||||| |||| || || | ||||| || | Sbjct 2080 GCCCGGCCCTCGCGCTCATAGCGTGTGTACAGCTCCTCAAATTCAGCTCCCCA---CTTG 2024 Query 244949 TCT---AGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTTGACC 245005 ||| || || || | ||||| | || ||| || || ||| ||| || Sbjct 2023 TCTTGAAGACCTGGTGCCTCATTGGGGCAAAACAGTGACCAGTCTCCTCCGGCCTCCACT 1964 Query 245006 CTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCG 245065 |||| ||| || || ||||| | ||| || || | |||||| || |||| | |||||| Sbjct 1963 CTCTCCATAAATAGATCGGGTACCCACAGAGCATAGAAGAGATCTCTGGCTCGCTGCTCT 1904 Query 245066 TCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCC 245125 ||| ||| |||||| ||||||||| || ||||||| ||| ||||||| |||||| Sbjct 1903 TCCTTGCCGTGGTTCTTTTTCAGCTCCAGGAACTCAAAGATGTCCGCGTGCCAAGGCTCC 1844 Query 245126 ATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCAC-CATCCTCTCGAG 245184 | |||| || | || || | |||| || || || || || | | | | | Sbjct 1843 AGATAGATTGCAAATGCTCCCTTTCTCTTGCCACCACCTTGATCTACGTAGCGTGCTGTG 1784 Query 245185 CGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGAT 245244 ||||| | | |||| | || | || ||||| || ||||| |||||| |||| Sbjct 1783 -TCGTTGTACACTCGCAACATTGGAATTAGACCGTTGGATGTTCCGTTCGTGCCCCTGAT 1725 Query 245245 GTAGGCGCCCTTGC-CCCTGAGGTTGCTGATGGACA-TG---CCTAGTCCGCCGGCGTGC 245299 ||| || | || | || || || || ||| || |||| ||| ||||| | Sbjct 1724 GTA--CGAGTTAGCAGCACGAATTT--TG-TGCACACTGAGACCTATTCCTCCGGCACTC 1670 Query 245300 TTGGAGATGAGGGCGCAGCTCTTGATG-GTGTCTGCTATGCCCTCCATGCTGTCCGACTT 245358 ||||| || | || || || || | | ||||| ||| || || |||||||| | Sbjct 1669 TTGGAAATCAAAGCACA-CTGTTTAAGTGTGTCATATATCCCTTCTATGCTGTCTTCTTG 1611 Query 245359 CATGTTGAGCAGAAAGCAGGAGGACAGCTG-GGGCTTGGGGCTGCACGAGTTGAACAGAG 245417 |||||| | |||||||| || || ||||| || ||||| | ||| | ||||| || | Sbjct 1610 CATGTTAACGAGAAAGCACGAAGAAAGCTGTGGTCTTGGCG-TGCCAGCATTGAAAAGTG 1552 Query 245418 TGGGGCTGGCGTGGGTAAA 245436 |||| |||| || || || Sbjct 1551 TGGGAGTGGCATGAGTGAA 1533 >seq24165 Length=2677 Score = 248 bits (274), Expect = 2e-60 Identities = 420/607 (69%), Gaps = 10/607 (2%) Strand=Plus/Plus Query 42421 TACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCA 42480 || |||||||||| || || ||||| ||||| || | ||||||| |||| | |||| Sbjct 1880 TATTGGCCTTCTTTGCTGCATCTGATGGCATTGTGACTGAGAACTTGGCTGGTCGCTTCA 1939 Query 42481 TGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGA 42540 ||| ||||| ||| | |||||| ||||||||||||||||| ||||| ||||| |||| Sbjct 1940 TGACCGAGGTTCAGATCCCTGAGGCTCGCTGCTTCTACGGCTTTCAGATCGCCATTGAGA 1999 Query 42541 ACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGC 42600 || | ||||| || |||| | || | |||| ||| | ||| || | ||| Sbjct 2000 ACATTCACTCGGAAATGTATTCGCTCTTGATAGACACTTACGTGAAGGACCCAGCAGAGA 2059 Query 42601 GTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGG 42660 | | || ||||| ||||| || ||| |||| | |||||||||| || || |||| Sbjct 2060 AGGATCGCCTCTTCAATGCCATCGAAACGGTGCCTTCTGTCAAGAAGAAAGCTGAATGGG 2119 Query 42661 CGCTCAACTGGATCGAGAGTCCCGACGCA---ACGTTCGGCGAGAGGCTGGTAGCCTTTA 42717 | ||||| ||||| || | | | |||| || ||| ||||| | || || || Sbjct 2120 CCCTCAAATGGATTGAAAAGGCTGGCGCAGATACATTCCCTGAGAGATTAGTGGCATTCG 2179 Query 42718 CCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGA 42777 |||| || ||||| |||||||||||||| |||| |||||||| ||||||||| ||| Sbjct 2180 CCGCTGTGGAGGGTATCTTCTTCTCGGGGAGCTTCTGTTCCATCTTTTGGCTCAAGAAGA 2239 Query 42778 AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGC 42837 || ||||| || ||| |||| || || | |||||||| || ||||| || | Sbjct 2240 GGGGCCTCATGCCAGGCCTCTGCTTCAGCAATGAGTTGATCAGCAGAGATGAGGGCCTTC 2299 Query 42838 ATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGC 42897 || | ||||||||||||||||| | | | | | ||| | | || |||| Sbjct 2300 ATTGCGACTTTGCCTGCCTCCTCTACAGCATGCTCGTCAACCGACCGTCCACGAA----- 2354 Query 42898 GGGTCCGGGCC--ATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTC 42955 ||| || ||||||| |||||| ||||| || |||||||| ||| | | |||| Sbjct 2355 TATTCCCACCCAAATCATCAAGGAGGCTGTGGAAATTGAGAAGGAATTCGTATCAGAGTC 2414 Query 42956 GCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGT 43015 || || || ||| | || |||||| ||| ||||||||| | ||||| ||| || Sbjct 2415 TCTTCCAGTTGGCCTCATTGGAATGAACGCCGAGCTCATGTGCCAATACATTGAGTTTGT 2474 Query 43016 CGCCGAC 43022 || ||| Sbjct 2475 GGCGGAC 2481 >seq5862 Length=2677 Score = 224 bits (248), Expect = 2e-53 Identities = 416/607 (69%), Gaps = 10/607 (2%) Strand=Plus/Plus Query 42421 TACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCA 42480 || |||||||||| || || ||||| ||||| || | ||||||| |||| | |||| Sbjct 1446 TATTGGCCTTCTTTGCTGCGTCTGATGGCATTGTGACTGAGAACTTGGCTGGTCGCTTCA 1505 Query 42481 TGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGA 42540 ||| ||||| ||| |||||| ||||||||||||||||| ||||| ||||| |||| Sbjct 1506 TGACCGAGGTTCAGATTCCTGAGGCTCGCTGCTTCTACGGCTTTCAGATCGCCATTGAGA 1565 Query 42541 ACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGC 42600 || | ||||| || |||| | || | |||| ||| | ||| || | ||| Sbjct 1566 ACATTCACTCGGAAATGTATTCGCTCTTGATAGACACTTACGTGAAGGACCCTGCAGAGA 1625 Query 42601 GTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGG 42660 | | || ||||| ||||| || ||| |||| | |||||||||| || || |||| Sbjct 1626 AGGATCGCCTCTTCAATGCCATCGAAACGGTGCCTTCGGTCAAGAAGAAAGCTGAATGGG 1685 Query 42661 CGCTCAACTGGATCGAGAGTCCCGACGCA---ACGTTCGGCGAGAGGCTGGTAGCCTTTA 42717 | |||| ||||| || | | | |||| || || ||||| | || || || Sbjct 1686 CCCTCAGATGGATTGAAAAGGCTGGCGCAGATACATTTCCTGAGAGATTAGTGGCATTCG 1745 Query 42718 CCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGA 42777 |||| || ||||| |||||||||||||| |||| |||||||| ||||| ||| ||| Sbjct 1746 CCGCTGTGGAGGGTATCTTCTTCTCGGGTAGCTTCTGTTCCATCTTTTGGCTTAAGAAGA 1805 Query 42778 AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGC 42837 || ||||| || ||| |||| || ||| | |||||||| || ||||| || | Sbjct 1806 GGGGCCTAATGCCAGGCCTCTGCTTCAGCAATGAATTGATCAGCAGAGATGAGGGCCTTC 1865 Query 42838 ATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGC 42897 || | ||||||||||||||||| | | ||| ||| || || || | | Sbjct 1866 ATTGCGACTTTGCCTGCCTCCTATAC---AGCATGCTCGTCAACCGACCATCCACTAA-- 1920 Query 42898 GGGTCCGGGCC--ATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTC 42955 ||| || ||||||| |||||| ||||| || |||||||| ||| | | |||| Sbjct 1921 TATTCCCACCCAAATCATCAAGGAGGCTGTGGAAATTGAGAAGGAATTCGTATCAGAGTC 1980 Query 42956 GCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGT 43015 || || || ||| | || |||||| ||| |||||||| | ||||| ||| || Sbjct 1981 TCTTCCAGTTGGCCTCATTGGAATGAACGCCGAGCTCATGTGTCAATACATTGAGTTTGT 2040 Query 43016 CGCCGAC 43022 || ||| Sbjct 2041 GGCGGAC 2047 >seq35896 Length=749 Score = 187 bits (206), Expect = 5e-42 Identities = 360/528 (68%), Gaps = 10/528 (2%) Strand=Plus/Plus Query 42500 TGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTA 42559 |||||| ||||||||||||||||| ||||| ||||| |||||| | ||||| || |||| Sbjct 3 TGAGGCTCGCTGCTTCTACGGCTTTCAGATCGCCATTGAGAACATTCACTCGGAAATGTA 62 Query 42560 CGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGC 42619 | || | |||| ||| | ||| || | ||| | | || ||||| || Sbjct 63 TTCGCTCTTGATAGACACTTACGTGAAGGACCCTGCAGAGAAGGATCGCCTCTTCAATGC 122 Query 42620 CATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAG 42679 ||| || ||| |||| | |||||||||| || || ||||| |||| ||||| || | Sbjct 123 CATCGAAACGGTGCCTTCGGTCAAGAAGAAAGCTGAATGGGCCCTCAGATGGATTGAAAA 182 Query 42680 TCCCGACGCA---ACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTT 42736 | | |||| || || ||||| | || || || |||| || ||||| ||||| Sbjct 183 GGCTGGCGCAGATACATTTCCTGAGAGATTAGTGGCATTCGCCGCTGTGGAGGGTATCTT 242 Query 42737 CTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACT 42796 ||||||||| |||| |||||||| ||||| ||| ||| || ||||| || || Sbjct 243 CTTCTCGGGTAGCTTCTGTTCCATCTTTTGGCTTAAGAAGAGGGGCCTAATGCCAGGCCT 302 Query 42797 CACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCT 42856 | |||| || ||| | |||||||| || ||||| || ||| | |||||||||||||| Sbjct 303 CTGCTTCAGCAATGAATTGATCAGCAGAGATGAGGGCCTTCATTGCGACTTTGCCTGCCT 362 Query 42857 CCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCC--ATCATC 42914 ||| | | ||| ||| || || || | | ||| || |||||| Sbjct 363 CCTATAC---AGCATGCTCGTCAACCGACCATCCACTAA--TATTCCCACCCAAATCATC 417 Query 42915 ACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTC 42974 | |||||| ||||| || |||||||| ||| | | |||| || || || ||| | Sbjct 418 AAGGAGGCTGTGGAAATTGAGAAGGAATTCGTATCAGAGTCTCTTCCAGTTGGCCTCATT 477 Query 42975 GGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCGAC 43022 || |||||| ||| |||||||| | ||||| ||| || || ||| Sbjct 478 GGAATGAACGCCGAGCTCATGTGTCAATACATTGAGTTTGTGGCGGAC 525 >seq24166 Length=499 Score = 185 bits (204), Expect = 2e-41 Identities = 259/363 (71%), Gaps = 3/363 (1%) Strand=Plus/Plus Query 42421 TACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCA 42480 || |||||||||| || || ||||| ||||| || | ||||||| |||| | |||| Sbjct 125 TATTGGCCTTCTTTGCTGCATCTGATGGCATTGTGACTGAGAACTTGGCTGGTCGCTTCA 184 Query 42481 TGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGA 42540 ||| ||||| ||| | |||||| ||||||||||||||||| ||||| ||||| |||| Sbjct 185 TGACCGAGGTTCAGATCCCTGAGGCTCGCTGCTTCTACGGCTTTCAGATCGCCATTGAGA 244 Query 42541 ACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGC 42600 || | ||||| || |||| | || | |||| ||| | ||| || | ||| Sbjct 245 ACATTCACTCGGAAATGTATTCGCTCTTGATAGACACTTACGTGAAGGACCCAGCAGAGA 304 Query 42601 GTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGG 42660 | | || ||||| ||||| || ||| |||| | |||||||||| || || |||| Sbjct 305 AGGATCGCCTCTTCAATGCCATCGAAACGGTGCCTTCTGTCAAGAAGAAAGCTGAATGGG 364 Query 42661 CGCTCAACTGGATCGAGAGTCCCGACGCA---ACGTTCGGCGAGAGGCTGGTAGCCTTTA 42717 | ||||| ||||| || | | | |||| || ||| ||||| | || || || Sbjct 365 CCCTCAAATGGATTGAAAAGGCTGGCGCAGATACATTCCCTGAGAGATTAGTGGCATTCG 424 Query 42718 CCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGA 42777 |||| || ||||| |||||||||||||| |||| |||||||| ||||||||| ||| Sbjct 425 CCGCTGTGGAGGGTATCTTCTTCTCGGGGAGCTTCTGTTCCATCTTTTGGCTCAAGAAGA 484 Query 42778 AGG 42780 || Sbjct 485 GGG 487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 943659346601440