Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20comandoni_20[genbank_20GCA_5F002025285.1_202017-03- 13] 57,594 sequences; 86,214,659 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq49259 118 1e-21 seq21914 113 4e-20 seq16312 105 6e-18 seq310 104 2e-17 seq26564 102 7e-17 seq4534 102 7e-17 seq20128 100 3e-16 seq49647 98.7 9e-16 seq48723 96.9 3e-15 seq37486 95.1 1e-14 seq21456 95.1 1e-14 seq4310 89.7 5e-13 seq21227 87.8 2e-12 seq4039 87.8 2e-12 seq2942 87.8 2e-12 seq3581 86.0 6e-12 seq25074 82.4 7e-11 >seq49259 Length=868 Score = 118 bits (130), Expect = 1e-21 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTC 45190 ||||| ||| || || || ||||||||||| || |||||| | ||| ||| || Sbjct 262 CACTAAATGGAGGGTAGACTCCTTTTGGATGTTGTAATCGGCCAAGGTGCGGCCATCCTC 321 Query 45191 CAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTG 45250 | ||| || || ||| | |||| || |||||||| || |||||||| || |||||||| Sbjct 322 AAGTTGCTTACCAGCGAAGATCAGACGCTGCTGGTCAGGGGGAATGCCCTCCTTATCTTG 381 Query 45251 AATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310 ||| || || |||| ||| | | ||| || || || || ||||| |||| || || Sbjct 382 AATCTTCTGCTTGACGTTTTCAATAGAGTCAGAGGATTCCACCTCGAGGGTAATGGTCTT 441 Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || | |||||||||||| || ||||| Sbjct 442 TCCAGTCAAAGTTTTTACAAAGATCTGCAT 471 >seq21914 Length=1598 Score = 113 bits (124), Expect = 4e-20 Identities = 167/236 (71%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 45107 TTTTATT--CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTA 45164 ||||||| ||||| || | || | ||| | |||||| || || ||||||||||| ||| Sbjct 627 TTTTATTGTCCTCCACGCAATCTGAGCACCAAATGCAGAGTGGACTCCTTTTGGATGTTA 568 Query 45165 TAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGG 45224 || || | || ||| |||| ||||| ||||| | ||||| || |||||| Sbjct 567 TAGTCTGCAAGAGTGCGGCCATCCTCCAGCTGTTTGCCTGCAAAGATCAAGCGCTGCTGG 508 Query 45225 TCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAA 45284 || || |||||||| || ||||||||||| || ||||| | || | | |||| || Sbjct 507 TCGGGTGGAATGCCCTCCTTATCTTGAATCTTCTGTTTAACATTCTCGATGCTGTCAGAG 448 Query 45285 GACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| ||||| | || | || ||||| || | || || || ||||| ||||| Sbjct 447 GACTCCACTTCCAAGGTGATGGTCTTGCCAGTCAATGTCTTGACGAAAATCTGCAT 392 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 || || || |||||||| ||||| ||||| || | ||| ||| |||| ||| Sbjct 366 TGAAGGGTAGATTCCTTCTGGATGTTATAGTCAGCAAGGGTGCGGCCATCCTCCAGCTGT 307 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || ||||| | ||||| |||||||| || || || ||||| || || || || || || Sbjct 306 TTGCCTGCAAAGATCAAACGTTGCTGATCAGGTGGGATGCCCTCCTTGTCCTGGATCTTC 247 Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317 || |||| ||| | | ||| || |||||||||||| || | || |||||||| Sbjct 246 TGCTTGACGTTTTCGATTGAGTCAGAGCTCTCGACTTCGAGGGTGATGGTCTTGCCGGTC 187 Query 45318 AGAGTTTTTACAAAAATTTGCAT 45340 | || || ||||| |||||||| Sbjct 186 AAGGTCTTCACAAAGATTTGCAT 164 >seq16312 Length=2383 Score = 105 bits (116), Expect = 6e-18 Identities = 153/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATC-GCTGACGGTTTTAGAATCGTC 45190 || || || || || || ||||| ||||| || || || ||| | || | ||| || Sbjct 2292 ACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCAGCT-AGTGTGCGACCATCCTC 2234 Query 45191 CAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTG 45250 | ||| || || ||| | |||| ||||| ||||| || |||||||| || || || || Sbjct 2233 GAGTTGCTTACCAGCGAAGATCAGACGTTGTTGGTCGGGTGGAATGCCCTCCTTGTCCTG 2174 Query 45251 AATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTT 45309 || ||||| |||| || | || | | |||| || || || ||||| ||||||| || | Sbjct 2173 GATCTTTTGCTTGA-CGTTCTCGATGCTGTCAGATGATTCAACTTCCAGAGTAATGGTCT 2115 Query 45310 TGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | || || || ||||||||||| |||||||| Sbjct 2114 TTCCAGTGAGCGTTTTTACAAAGATTTGCAT 2084 >seq310 Length=11085 Score = 104 bits (114), Expect = 2e-17 Identities = 548/859 (64%), Gaps = 31/859 (4%) Strand=Plus/Minus Query 122916 CAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGCGACATCGAAAACGCGACC 122975 ||||| ||| | ||||| || ||| |||| |||| | |||||| | | | Sbjct 1929 CAACACATGTTGATGCGAGTTGCTGTAGGACTGCATAAAACTGACATCAGAGCGGTGTTG 1870 Query 122976 GAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCGAGTCCCACTTTGTTCGCC 123035 || || || || |||| || ||| || | ||||| || || | |||||| | ||| Sbjct 1869 GAGACATATAATCTGATCTCCCAACAACTGTTCACTCATGCCACTCCCACACTTTTCAAT 1810 Query 123036 GCCGGCACG--AAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTCACCTTGCGCGAAGACA 123093 || |||||| ||| ||| ||| | |||||||| ||| | | | | ||| ||||||| Sbjct 1809 GCTGGCACGCCAAG--GCCACAGCTTTCTTCGTGCTTTCTCGTTAACATGCAAGAAGACA 1752 Query 123094 GCATCACCGGTATCTATGAAACTTTGCGCGATTGCGCGTTGATTTCCAAATTTGGCGGCG 123153 |||| || || ||||| || | | || || ||||||||||| || ||| | Sbjct 1751 GCATAGAAGGGATATATGACACACTTAAACAGTGTGCTTTGATTTCCAAGAGTGCCGGAG 1692 Query 123154 GCATAGGCGTGAACGTGCACGACGTAAGAGGCCGCGGAAGCCG--CATCAGAAGCACCGA 123211 | ||||| | | |||||| | | | || || || || |||||| |||| | Sbjct 1691 GAATAGGTCTCAGTGTGCACAAAATTCG-TGCTGC-TAACTCGTACATCAGGGGCACGAA 1634 Query 123212 CGGAATCGCCTCCGGGCTCGAATCC-ATGCTGCGAGTTTACAATAACGCCGTGCGGCACG 123270 ||| | || ||| || | ||| ||| ||||||| ||||| || | | || ||| Sbjct 1633 CGGCACGTCCAACGGTCT-AATTCCAATGTTGCGAGTGTACAACGACACAGCACGCTACG 1575 Query 123271 TCGACCA---GGGCGGCAAACGCAAAGGCGCGATGGCGATCTATCTAGAACCGTGGCACG 123327 | || || || ||||| | || || || | || |||||||| || || ||||||| Sbjct 1574 TAGATCAAGGTGGTGGCAAGAGAAAGGGAGCATTTGCAATCTATCTGGAGCCTTGGCACG 1515 Query 123328 TTGATGTGTACGATTTTTTAAATTTAAAACGCAACATGGGGGCGGAAGAAAAGAAAGCCC 123387 || | | || ||||| | | ||| ||| || |||||| || |||| Sbjct 1514 CGGACATCTTTGAGTTTTTGGAGCTGAAAAAGAACCACGGCAAGGAAGAGCAGCGAGCCA 1455 Query 123388 GCGATTTGTTGTACGCTTTATGGGTACCCGATTTGTTTATGCGACGCGTAAAAGACGACG 123447 | ||| | || || ||| | |||||||||||| |||| ||| | || | | || | Sbjct 1454 GAGATCTCTTCTATGCTCTGTGGGTACCCGATCTGTTCATGGAGAGAGTGGAGGCCGGAG 1395 Query 123448 GCGTGTGGTCGCTCATGTGTCCCGATCGGTGTCCCGG-CTTGAGCGACGTTTACGGCAAT 123506 | | ||||| || | || ||| || | || || ||| | ||| | || | Sbjct 1394 GAGACTGGTCACTGTTTTGCCCCAATGAGGCACCAGGTCTTCA-AGACAAGTGGGGAGCT 1336 Query 123507 CAGTTTGACGAGTTGTACGCGCAATACGAGCGCGA-----AGGCAAACAGGTTAGTCAGG 123561 | ||||| ||| ||||| | | || |||||||| ||||| | |||| | Sbjct 1335 GAATTTGAGGAGCTGTACACACGCTATGAGCGCGAGGGCCGGGCAAGGCGTGCTGTCAAG 1276 Query 123562 TTCCGGCACGTGATTTGTTCAAATT--TATTATCGAAACACAAGTCGAAACCGGAACGCC 123619 | || | | |||| | || ||| | || | ||| | || || || || || Sbjct 1275 GCC---CAAGAGCTTTGGT----TTGCTATCTTGGAGGCCCAAATAGAGACTGGTACTCC 1223 Query 123620 GTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCA-GAGCAACTTGGGAACAA 123678 || ||||||||||| ||| ||||||| |||| |||| || ||| || | || || | Sbjct 1222 TTATATGCTCTACAAGGACCACTGCAACGCGAAATCCAACCATCAGC-ACCTCGGCACCA 1164 Query 123679 TAAAATGTAGTAATCTTTGCTCCGAAATTATCGAATACAGCGATGCCGATCAAGTGGCCG 123738 | ||||| || ||||| | |||||| || | | || || | ||||||||| Sbjct 1163 TTCAATGTTCCAACCTTTGTACTGAAATTGTCCAGTTCACATCACCCAAAGAAGTGGCCG 1104 Query 123739 TGTGTAATTTGGCTTCGAT 123757 |||||||| | ||||| || Sbjct 1103 TGTGTAATCTTGCTTCAAT 1085 >seq26564 Length=912 Score = 102 bits (112), Expect = 7e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATC-GCT 45172 || || || || | ||| || |||||||| || || ||||| ||||| || || || ||| Sbjct 275 CCCCCACGCAGGCGCAATACAAGATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCTGCT 216 Query 45173 GACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGG 45232 | || || || | ||||| ||||| | || | ||||||||||| || || Sbjct 215 -AGTGTGCGGCCGTCCTCGAGCTGTTTGCCTGCAAAGATGAGACGTTGCTGGTCAGGGGG 157 Query 45233 AATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGAC 45292 || || ||||| |||||||| || || || | || | | |||| || |||||||| Sbjct 156 GATACCCTCTTTGTCTTGAATCTTCTGCTTCACATTCTCGATGCTGTCAGAGGACTCGAC 97 Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || |||| || ||||| || | |||||||||||| || ||||| Sbjct 96 CTCAAGGGTAATGGTCTTGCCAGTCAAAGTTTTTACAAAGATCTGCAT 49 >seq4534 Length=5043 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 ||||| ||||| || ||||| ||||| ||||||| || || |||||| Sbjct 3460 ACTAGGTGCAGTGTGCTCTCCTTCTGGATGGAATAATCGGCCACCGTGCGTCCATCGTCG 3519 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 | ||| || || || | |||| || |||||||| || || |||||||| || || || Sbjct 3520 AGTTGCTTCCCGGCAAAGATCAGACGCTGCTGGTCGGGGGGGATGCCTTCCTTGTCCTGG 3579 Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311 || ||||| ||||| || | | | |||||||||||||| || | || | ||| ||| Sbjct 3580 ATCTTTTGCTTGATGTTCTCGATGCTATCGGAAGACTCGACCTCCAAGGTGATCGTCTTG 3639 Query 45312 CCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || || ||||| |||||||| Sbjct 3640 CCTGTCAGTGTCTTGACAAAGATTTGCAT 3668 >seq20128 Length=1734 Score = 100 bits (110), Expect = 3e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || ||||| | || | || ||| || || || || ||||||||||| || || || ||| Sbjct 1546 ATGCCTCCTCTCAGGCGCAGCACGAGGTGAAGGGTAGATTCCTTTTGAATGTTGTAGTCG 1487 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || ||| ||| || | ||||| ||||| | || | || |||||||| || Sbjct 1486 GCGAGGGTGCGGCCATCCTCAAGCTGTTTGCCTGCAAAGATGAGACGCTGCTGGTCAGGG 1427 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 || ||||| || ||||||||||| || || || | || | | | || || ||| Sbjct 1426 GGGATGCCCTCCTTATCTTGAATCTTCTGCTTCACATTCTCGATGCTATCAGAGCTCTCC 1367 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || |||| ||| ||||| || | |||||| ||||| || ||||| Sbjct 1366 ACTTCAAGGGTAATCGTCTTGCCAGTCAAAGTTTTGACAAAGATCTGCAT 1317 >seq49647 Length=441 Score = 98.7 bits (108), Expect = 9e-16 Identities = 117/156 (75%), Gaps = 2/156 (1%) Strand=Plus/Plus Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || || | ||| || || ||| | |||| ||||| ||||| || |||||||| || || Sbjct 248 TCCTCGAGTTGCTTACCAGCGAAGATCAGACGTTGTTGGTCGGGTGGAATGCCCTCCTTG 307 Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 || || || ||||| |||| || | || | | |||| || || || ||||| ||||||| Sbjct 308 TCCTGGATCTTTTGCTTGA-CGTTCTCGATGCTGTCAGATGATTCAACTTCCAGAGTAAT 366 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || || ||||||||||| |||||||| Sbjct 367 GGTCTTTCCAGTGAGCGTTTTTACAAAGATTTGCAT 402 >seq48723 Length=522 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 45113 TCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCT 45172 |||||| || || || | ||| | ||| || || |||||||||||||| || || || Sbjct 283 TCCTCCACGCAGTCTGAGCACCAAATGAAGAGTGGATTCCTTTTGGATGTTGTAGTCTGC 342 Query 45173 GACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGG 45232 | || ||| || | || || || ||| | || | || || || || || || Sbjct 343 AAGAGTGCGGCCATCTTCAAGCTGCTTGCCAGCGAAGATAAGGCGCTGTTGATCAGGGGG 402 Query 45233 AATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGAC 45292 |||||| || ||||||||||| || || |||| ||| | | ||| || || || || Sbjct 403 AATGCCCTCCTTATCTTGAATCTTCTGCTTGACGTTTTCAATAGAGTCAGAGGATTCCAC 462 Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| |||| || || || || | |||||||||||| || ||||| Sbjct 463 CTCGAGGGTAATGGTCTTTCCAGTCAAAGTTTTTACAAAGATCTGCAT 510 >seq37486 Length=869 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 || || || |||||||||||||| || || || | ||| ||| || | ||| Sbjct 125 TGGAGAGTAGATTCCTTTTGGATGTTGTAGTCTGCAAGGGTGCGGCCATCTTCAAGCTGT 184 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || ||||| | ||||| |||||||| || || |||||||| || || || || || || Sbjct 185 TTGCCTGCAAAAATCAAGCGTTGCTGATCAGGGGGAATGCCCTCCTTGTCCTGGATCTTC 244 Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316 || |||| || | || | | | || ||||| |||||||| ||||| | || ||||| || Sbjct 245 TGCTTGA-CGTTCTCGATGCTATCAGAAGATTCGACTTCCAGAGTGATAGTCTTGCCAGT 303 Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340 | || || || ||||| ||||| Sbjct 304 CAATGTCTTGACGAAAATCTGCAT 327 >seq21456 Length=1382 Score = 95.1 bits (104), Expect = 1e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || |||| || || ||||| | ||||| |||||||| || || |||||||| |||||| Sbjct 403 TCCTCCAGCTGCTTGCCTGCAAAGATCAAGCGTTGCTGATCAGGTGGAATGCCCTCTTTA 344 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 ||||| || || || || | || | | | || || || || ||||| ||||||| Sbjct 343 TCTTGGATCTTCTGCTTCACATTCTCGATGCTATCAGAGGATTCTACTTCCAGAGTAATG 284 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || || ||||||||||| || ||||| Sbjct 283 GTCTTTCCAGTCAGCGTTTTTACAAAGATCTGCAT 249 >seq4310 Length=8047 Score = 89.7 bits (98), Expect = 5e-13 Identities = 160/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATC- 45169 || ||||| | || | || || | ||| || || |||||||||||||| || || || Sbjct 35 ATGCCTCCTCTTAGACGCAGTACCAAATGGAGGGTGGATTCCTTTTGGATGTTGTAGTCA 94 Query 45170 GCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGG 45229 ||| | || ||| |||| || || || ||| | || | || || || || || Sbjct 95 GCT-AGCGTGCGGCCATCCTCCAGCTGCTTACCAGCGAAGATGAGACGCTGTTGATCAGG 153 Query 45230 CGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTC 45289 |||||||| || || ||||| || || ||||||| ||| | | ||| || || || Sbjct 154 TGGAATGCCCTCCTTGTCTTGGATCTTCTGTTTGACGTTTTCAATAGAGTCAGAGGATTC 213 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||||| |||| || ||||| || | ||| || || || |||||||| Sbjct 214 CACTTCGAGGGTAATAGTCTTGCCAGTCAAAGTCTTCACGAAGATTTGCAT 264 >seq21227 Length=1716 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATC-GCTGACGGTTTTAGAATCGTC 45190 || || || || || || ||||| ||||| || || || ||| | || | ||| || Sbjct 1528 ACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCAGCT-AGTGTGCGACCATCCTC 1470 Query 45191 CAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTG 45250 | ||| || || ||| | |||| ||||| ||||| || |||||||| || || || || Sbjct 1469 GAGTTGCTTACCAGCGAAGATCAGACGTTGTTGGTCGGGTGGAATGCCCTCCTTGTCCTG 1410 Query 45251 AATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTT 45309 || ||||| |||| || | || | | | || || ||| ||||| ||||| | || | Sbjct 1409 GATCTTTTGCTTGA-CGTTCTCGATGCTATCAGAGCTCTCCACTTCCAGAGTGATGGTCT 1351 Query 45310 TGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | || || || ||||||||||| || ||||| Sbjct 1350 TTCCAGTGAGCGTTTTTACAAAGATCTGCAT 1320 >seq4039 Length=8492 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 45113 TCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCT 45172 |||||| || || || | ||| | ||| || || |||||||||||||| || || || Sbjct 7315 TCCTCCACGCAGTCTGAGCACCAAATGAAGAGTGGATTCCTTTTGGATGTTGTAGTCTGC 7256 Query 45173 GACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGG 45232 | || ||| || | || || || || | ||||| |||||||| || || || Sbjct 7255 AAGAGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAGATCAAACGTTGCTGATCAGGGGG 7196 Query 45233 AATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGAC 45292 |||||| || || || || || ||||| |||| ||| | | ||| || || || || Sbjct 7195 AATGCCCTCCTTGTCCTGGATCTTTTGCTTGACGTTTTCAATAGAGTCAGAGGATTCCAC 7136 Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || | || || || || | ||| || || || |||||||| Sbjct 7135 CTCGAGGGTGATGGTCTTTCCAGTCAAAGTCTTCACGAAGATTTGCAT 7088 >seq2942 Length=1743 Score = 87.8 bits (96), Expect = 2e-12 Identities = 162/238 (68%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 45103 TTTATTTTATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATAT 45162 |||||| | |||||| || | || | ||| ||||| || || || ||||| ||||| | Sbjct 1399 TTTATTGTTGTCCTCCTCGCAATCTGAGCACCAGATGGAGGGTGGACTCCTTCTGGATGT 1458 Query 45163 TATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCT 45222 | || || | ||| | ||| || | || || || || | ||||| ||||||| Sbjct 1459 TGTAGTCTGCAAGGGTGCGACCATCCTCGAGCTGCTTGCCGGCAAAGATCAAACGTTGCT 1518 Query 45223 GGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGG 45282 |||| || ||||| ||||| || || || || || || || | ||| | | ||| | Sbjct 1519 GGTCTGGAGGAATACCTTCCTTGTCCTGGATCTTCTGCTTCACATTTTCAATCGAGTCAG 1578 Query 45283 AAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | ||| ||||| | || | || ||||| || || || || ||||| |||||||| Sbjct 1579 AGCTCTCCACTTCCAAGGTGATAGTCTTGCCAGTCAGGGTCTTCACAAAGATTTGCAT 1636 >seq3581 Length=10373 Score = 86.0 bits (94), Expect = 6e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTC 45190 ||| | ||| || || || ||||||||||| || || ||| | ||| || || Sbjct 5023 CACCAAATGGAGGGTAGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCGTCCTC 4964 Query 45191 CAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTG 45250 | || || || ||| | ||||| ||||| ||||| || |||||||| || || || || Sbjct 4963 GAGCTGCTTGCCAGCGAAGATCAAACGTTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTG 4904 Query 45251 AATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTT 45309 ||| || || |||| || | || | | ||| || |||||||| || || || | || | Sbjct 4903 AATCTTCTGCTTGA-CGTTCTCGATCGAGTCAGAGGACTCGACCTCAAGGGTGATAGTCT 4845 Query 45310 TGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||| || | || || || ||||| ||||| Sbjct 4844 TGCCAGTCAAGGTCTTGACGAAAATCTGCAT 4814 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/122 (77%), Gaps = 3/122 (2%) Strand=Plus/Minus Query 45221 CTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTG-TTTGATCGCT-TCTACGGTG 45278 ||| || || ||||| || || || |||||||| ||||| ||||| || | || | | || Sbjct 4702 CTGATCAGGGGGAATACCCTCCTTGTCTTGAATCTTTTGCTTTGA-CGTTCTCGATGCTG 4644 Query 45279 TCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGC 45338 || |||||||| || ||||| |||| || || || || | |||||||||||| || ||| Sbjct 4643 TCAGAAGACTCCACCTCGAGGGTAATGGTCTTTCCAGTCAAAGTTTTTACAAAGATCTGC 4584 Query 45339 AT 45340 || Sbjct 4583 AT 4582 Score = 82.4 bits (90), Expect = 7e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 || || || || ||||||||||| || || ||| | ||| || || | || Sbjct 4556 TGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCGTCCTCGAGCTGC 4497 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || || ||| | || | || ||||| || || |||||||| || ||||||||||| || Sbjct 4496 TTACCAGCGAAAATAAGGCGCTGCTGATCAGGGGGAATGCCCTCCTTATCTTGAATCTTC 4437 Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317 || || | || | | |||| || ||||||||||| ||||||| || || || || Sbjct 4436 TGCTTCACATTCTCGATGCTGTCAGACGACTCGACTTCCAGAGTAATAGTCTTACCAGTG 4377 Query 45318 AGAGTTTTTACAAAAATTTGCAT 45340 || || || || || || ||||| Sbjct 4376 AGGGTCTTGACGAAGATCTGCAT 4354 >seq25074 Length=2226 Score = 82.4 bits (90), Expect = 7e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 || || || || ||||||||||| || || || | ||| | || |||| || Sbjct 239 TGGAGGGTGGACTCCTTTTGGATGTTGTAGTCTGCAAGGGTGCGACCGTCCTCCAGCTGC 298 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || || ||| | |||| || || || || || || |||||||| || || ||||| || Sbjct 299 TTGCCAGCGAAGATCAGACGCTGTTGATCAGGTGGGATGCCTTCCTTGTCCTGAATCTTA 358 Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317 || |||| ||| | | ||| || || || || || |||||||| || || ||||| Sbjct 359 TGCTTGACGTTTTCAATAGAGTCTGAGGATTCCACCTCAAGAGTAACGGTCTTTCCGGTC 418 Query 45318 AGAGTTTTTACAAAAATTTGCAT 45340 | ||| || || || |||||||| Sbjct 419 AAAGTCTTCACGAAGATTTGCAT 441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451677791596240