Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20comandoni_20[genbank_20GCA_5F002025285.1_202017-03- 13] 57,594 sequences; 86,214,659 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq4471 152 2e-31 seq27716 138 4e-27 seq40005 134 5e-26 seq37486 134 5e-26 seq3581 131 7e-25 seq49354 129 2e-24 seq48723 122 3e-22 seq49647 120 1e-21 seq49259 120 1e-21 seq4039 114 5e-20 seq21914 113 2e-19 seq20128 113 2e-19 seq16312 111 6e-19 seq4310 109 2e-18 seq6315 104 9e-17 seq23100 100 1e-15 seq17103 95.1 5e-14 seq25074 93.3 2e-13 seq6893 93.3 2e-13 seq30220 87.8 7e-12 seq49444 86.0 2e-11 >seq4471 Length=7746 Score = 152 bits (168), Expect = 2e-31 Identities = 284/415 (68%), Gaps = 13/415 (3%) Strand=Plus/Plus Query 451196 AAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAA-ACTTTTGCTCCTGAAGAAAT 451254 || || || ||||| || | || ||||| || || || |||||| | || |||||||| Sbjct 56 AAACCATACATTCAGGTGGAGTACAAAGGGGAGACAAAGGACTTTT-CACCAGAAGAAAT 114 Query 451255 TTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGT 451314 ||| | ||||| || | || ||||| |||||| |||| || | || || || Sbjct 115 ATCAGCAATGGTGCTGATGAAGATGAAGGAAACATCAGAGTCCTACCTGGGCCAACCCGT 174 Query 451315 TACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAA 451374 | ||||||| ||||| || || ||||| ||||||||| | ||| |||||||||| || Sbjct 175 CAAGAATGCAGTCATTACAGTGCCAGCTTACTTCAATGATTCCCAAAGGCAAGCAACGAA 234 Query 451375 AGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGC 451434 |||||||||| || || || | ||||| | || || ||||| |||||||| || Sbjct 235 AGATGCAGGAACCATAGCAGGGATCAATGTCAAGAGGATAATCAATGAGCCTACAGCGGC 294 Query 451435 TGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACA----GAAGaaaaaaaTATTTTAG 451490 || |||| || || || | | ||||| || | ||| | ||| | | Sbjct 295 AGCAATAGCTTACGGCCT-------TGACAAGAACCACCAGGGAGAGAGGAATGTGCTCA 347 Query 451491 TATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTAT 451550 | |||||| ||||||| || || |||| |||| | || | ||||| ||||| | | Sbjct 348 TCTTTGATCTTGGTGGTGGCACATTTGATGTTTCTCTGCTCACCATTGAGGATGGACTCT 407 Query 451551 TTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 ||| ||||| ||||| || || |||||||| || || || || ||||||| Sbjct 408 TTGTCGTAAAAGCAACTGCAGGGGACACTCATCTGGGCGGAGAGGACTTTGATAA 462 Score = 102 bits (112), Expect = 3e-16 Identities = 157/224 (70%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 452198 GATAACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCAATGACACGAGAT 452257 |||||||||||||| ||| |||||||| | || ||||| | |||||||| | ||| Sbjct 1130 GATAACCAACCAGGAGTACTCATTCAAGTCTACGAGGGAGAGAGGGCAATGACCAGGGAT 1189 Query 452258 AATAATAAACTAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCCAAGGGGAACTCCT 452317 || || || || | ||| || |||||||||| | ||||||| ||| Sbjct 1190 AACAACCTTCTTGGCAAGTTTGAACTCAGCGGCATTCCTCCTGCTCAAAGGGGAGTGCCT 1249 Query 452318 CAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGAGTGCAGTTGAA 452377 || || || | ||| || | ||||| ||||| || || || || | ||| || || Sbjct 1250 CAGATAGAGGTCTCCTTCGACATGGATGCCAATGGAATCCTCAACGTCAATGCCGTAGAC 1309 Query 452378 AAATCATCTGGAAAATCAGAAAAAATTACAATTACTAATGATAA 452421 || || |||||||||||||||| || || ||||||||||| || Sbjct 1310 AAGACAACTGGAAAATCAGAAAAGATAACTATTACTAATGACAA 1353 >seq27716 Length=1159 Score = 138 bits (152), Expect = 4e-27 Identities = 281/415 (68%), Gaps = 13/415 (3%) Strand=Plus/Minus Query 451196 AAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAA-ACTTTTGCTCCTGAAGAAAT 451254 || || || ||||| || | || ||||| || || || |||||| | || |||||||| Sbjct 677 AAACCATACATTCAGGTGGAGTACAAAGGGGAGACAAAGGACTTTT-CACCAGAAGAAAT 619 Query 451255 TTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGT 451314 ||| | ||||| || | || ||||| |||||| |||| || | || || || Sbjct 618 ATCAGCAATGGTGCTGATGAAGATGAAGGAAACATCAGAGTCCTACCTGGGCCAACCCGT 559 Query 451315 TACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAA 451374 | |||||| ||||| || || ||||| ||||||||| | ||| |||| ||||| || Sbjct 558 CAAGAGTGCAGTCATTACAGTGCCAGCTTACTTCAATGATTCCCAAAGGCAGGCAACGAA 499 Query 451375 AGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGC 451434 |||||||||| || || || | ||||| | || || ||||| |||||||| || Sbjct 498 AGATGCAGGAACCATAGCAGGAATCAATGTCAAGAGGATAATCAATGAGCCTACAGCGGC 439 Query 451435 TGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACA----GAAGaaaaaaaTATTTTAG 451490 || |||| || || || | | ||||| || | ||| | ||| | | Sbjct 438 AGCAATAGCTTACGGCCT-------TGACAAGAACCACCAGGGAGAGAGGAATGTGCTCA 386 Query 451491 TATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTAT 451550 | |||||| |||||||||| || |||| |||| | || | ||||| || || | | Sbjct 385 TCTTTGATCTTGGTGGAGGCACATTTGATGTTTCTCTGCTCACTATTGAGGACGGACTTT 326 Query 451551 TTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 ||| ||||| ||||| || || |||||||| || || || || | ||||| Sbjct 325 TTGTCGTAAAAGCAACTGCAGGGGACACTCATCTGGGCGGAGAGGACTTCGATAA 271 >seq40005 Length=1874 Score = 134 bits (148), Expect = 5e-26 Identities = 280/415 (67%), Gaps = 13/415 (3%) Strand=Plus/Plus Query 451196 AAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAA-ACTTTTGCTCCTGAAGAAAT 451254 || || || ||||| || | || ||||| || || || |||||| | ||||||||||| Sbjct 776 AAACCATACATTCAGGTGGAGTACAAAGGGGAGACAAAGGACTTTT-CACCTGAAGAAAT 834 Query 451255 TTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGT 451314 ||| | ||||| || | || ||||| |||||| |||| || | || || || Sbjct 835 ATCAGCAATGGTGCTGATGAAGATGAAGGAAACATCAGAGTCCTACCTGGGCCAACCGGT 894 Query 451315 TACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAA 451374 | ||||||| ||||| || || ||||| ||||||||| | ||| |||||||||| || Sbjct 895 CAAGAATGCAGTCATTACGGTGCCAGCTTACTTCAATGATTCCCAAAGGCAAGCAACGAA 954 Query 451375 AGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGC 451434 |||||| ||| || || || | || || | || || ||||| || || || || Sbjct 955 AGATGCTGGAACCATAGCAGGGATCAACGTCAAGAGGATAATCAATGAGCCAACGGCGGC 1014 Query 451435 TGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACA----GAAGaaaaaaaTATTTTAG 451490 || |||| || || || | | ||||| || | ||| | || | | Sbjct 1015 AGCAATAGCTTACGGCCT-------TGACAAGAACCACCAGGGAGAGAGGAACGTGCTCA 1067 Query 451491 TATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTAT 451550 | |||||| ||||||| || || |||| |||| | || | ||||| ||||| | | Sbjct 1068 TCTTTGATCTTGGTGGTGGCACATTTGATGTTTCTCTGCTCACCATTGAGGATGGACTCT 1127 Query 451551 TTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 ||| |||||| ||||| || || || ||||| || || || || ||||||| Sbjct 1128 TTGTAGTAAAAGCAACTGCAGGGGACACGCATCTGGGCGGAGAGGACTTTGATAA 1182 >seq37486 Length=869 Score = 134 bits (148), Expect = 5e-26 Identities = 164/224 (73%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || ||| ||||||| || ||||| ||||| || || ||||| ||| Sbjct 327 ATGCAGATTTTCGTCAAGACATTGACTGGCAAGACTATCACTCTGGAAGTCGAATCTTCT 268 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||| || | || || || || || || ||||| || ||||| |||||||| Sbjct 267 GATAGCATCGAGAACGTCAAGCAGAAGATCCAGGACAAGGAGGGCATTCCCCCTGATCAG 208 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||||| || ||||| |||| ||||| ||||||||||| | || | || || || || Sbjct 207 CAACGCTTGATTTTTGCAGGCAAACAGCTTGAAGATGGCCGCACCCTTGCAGACTACAAC 148 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | ||||| | || || ||||| || | | |||||||| Sbjct 147 ATCCAAAAGGAATCTACTCTCCACTTGGTCCTTCGCCTGAGAGG 104 >seq3581 Length=10373 Score = 131 bits (144), Expect = 7e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 391047 ATAATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCA 391106 |||||| | || ||||| || || || |||||||| ||||||||||| || || || || Sbjct 4351 ATAATGCAGATCTTCGTCAAGACCCTCACTGGTAAGACTATTACTCTGGAAGTCGAGTCG 4410 Query 391107 TCTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGAT 391166 ||||| | ||| || | | || || || |||||||||||||| || ||||| |||||| Sbjct 4411 TCTGACAGCATCGAGAATGTGAAGCAGAAGATTCAAGATAAGGAGGGCATTCCCCCTGAT 4470 Query 391167 CAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTAT 391226 || || || | |||||| | || || || || || || || | || ||||| || || Sbjct 4471 CAGCAGCGCCTTATTTTCGCTGGTAAGCAGCTCGAGGACGGCCGCACCTTGGCCGACTAC 4530 Query 391227 AATATTGATAAGGATGCAACACTTCACTTAGT 391258 || || | ||||| | || |||||||| || Sbjct 4531 AACATCCAAAAGGAGTCCACCCTTCACTTGGT 4562 Score = 98.7 bits (108), Expect = 4e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || || ||||||| || ||||| || ||||| || || || ||| Sbjct 4814 ATGCAGATTTTCGTCAAGACCTTGACTGGCAAGACTATCACCCTTGAGGTCGAGTCCTCT 4873 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || || || | || || || ||||| || ||||| || ||||| ||||| ||| Sbjct 4874 GACTCGATCGAGAACGTCAAGCAGAAGATTCAGGACAAGGAGGGCATTCCCCCTGACCAA 4933 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||||| || ||| | || || || || || || || | || ||||| || || || Sbjct 4934 CAACGTTTGATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGCACCTTGGCCGACTACAAC 4993 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 || | ||||| | || || || || || Sbjct 4994 ATCCAAAAGGAGTCTACCCTCCATTTGGT 5022 >seq49354 Length=412 Score = 129 bits (142), Expect = 2e-24 Identities = 160/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 391056 ATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAAC 391115 |||||||| || || || ||||| || || ||||| || || || ||||| || || Sbjct 407 ATTTTCGTGAAGACGCTCACTGGCAAGACGATTACCCTCGAAGTGGAATCCTCAGACTCG 348 Query 391116 ATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGT 391175 ||||| | | || ||||| |||||||| ||||| || || || ||||||||||||||| Sbjct 347 ATTGAGAATGTCAAGCAAAAGATTCAAGACAAGGAGGGCATCCCACCTGATCAACAACGT 288 Query 391176 TTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGAT 391235 | || || |||| ||||| |||||||| || | || ||||| || || || ||| | Sbjct 287 CTGATCTTTGCAGGCAAACAGCTTGAAGACGGCCGTACCTTGGCCGACTACAACATTCAG 228 Query 391236 AAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 ||||| | || ||||| || || | | |||||||| Sbjct 227 AAGGAGTCTACTCTTCATTTGGTGCTTCGTTTGAGAGGA 189 Score = 86.0 bits (94), Expect = 2e-11 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || || ||||||| || || || || | || || || || Sbjct 185 ATGCAGATTTTCGTCAAGACCTTGACTGGCAAGACCATCACCTTGGAAGTGGAGAGCTCG 126 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| | | || || || || || || || || || ||||| ||||| ||| Sbjct 125 GACAGCATTGAGAATGTGAAGCAGAAGATCCAGGACAAAGAGGGTATTCCACCTGACCAA 66 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||||| || || |||| ||||| || || ||||| | || ||||| || || || Sbjct 65 CAACGTTTGATCTTTGCAGGCAAACAGCTCGAGGATGGCCGCACGTTGGCCGACTACAAC 6 Query 391230 AT 391231 || Sbjct 5 AT 4 >seq48723 Length=522 Score = 122 bits (134), Expect = 3e-22 Identities = 162/225 (72%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || ||||| ||||||| || || ||||| || || || ||||| ||| Sbjct 510 ATGCAGATCTTTGTAAAAACTTTGACTGGAAAGACCATTACCCTCGAGGTGGAATCCTCT 451 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || |||||| | || || || |||||||||||||| || ||||| ||||||||| Sbjct 450 GACTCTATTGAAAACGTCAAGCAGAAGATTCAAGATAAGGAGGGCATTCCCCCTGATCAA 391 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || || | || ||| | || || || ||||||||||| | ||| | || || || || Sbjct 390 CAGCGCCTTATCTTCGCTGGCAAGCAGCTTGAAGATGGCCGCACTCTTGCAGACTACAAC 331 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 || | ||||| | || ||||| || || | |||||| | ||| Sbjct 330 ATCCAAAAGGAATCCACTCTTCATTTGGTGCTCAGACTGCGTGGA 286 >seq49647 Length=441 Score = 120 bits (132), Expect = 1e-21 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || ||||| || ||||| || || |||||||| || |||||||||||| Sbjct 402 ATGCAAATCTTTGTAAAAACGCTCACTGGAAAGACCATTACTCTGGAAGTTGAATCATCT 343 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| || | || ||||| || || || ||||| || ||||| || || ||| Sbjct 342 GACAGCATCGAGAACGTCAAGCAAAAGATCCAGGACAAGGAGGGCATTCCACCCGACCAA 283 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||| | || ||| | || || ||||| || || || | || ||||| || || || Sbjct 282 CAACGTCTGATCTTCGCTGGTAAGCAACTCGAGGACGGCCGCACCTTGGCTGACTACAAC 223 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 || | ||||| | || |||||||| || Sbjct 222 ATCCAGAAGGAGTCCACTCTTCACTTGGT 194 >seq49259 Length=868 Score = 120 bits (132), Expect = 1e-21 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || ||||| ||||||| || || ||||| || || || ||||| ||| Sbjct 471 ATGCAGATCTTTGTAAAAACTTTGACTGGAAAGACCATTACCCTCGAGGTGGAATCCTCT 412 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || |||||| | || || || |||||||||||||| || ||||| ||||| || Sbjct 411 GACTCTATTGAAAACGTCAAGCAGAAGATTCAAGATAAGGAGGGCATTCCCCCTGACCAG 352 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || ||| | || || |||||||| ||||| | || ||||| ||||| || Sbjct 351 CAGCGTCTGATCTTCGCTGGTAAGCAACTTGAGGATGGCCGCACCTTGGCCGATTACAAC 292 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 || | ||||| | || || || ||||| Sbjct 291 ATCCAAAAGGAGTCTACCCTCCATTTAGT 263 >seq4039 Length=8492 Score = 114 bits (126), Expect = 5e-20 Identities = 161/226 (71%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || ||||| || || ||||||| || || || || || || || ||||| || Sbjct 7087 AATGCAAATCTTCGTGAAGACTTTGACTGGAAAGACCATCACCCTCGAGGTGGAATCCTC 7146 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||| |||||| | || ||||| || || || ||||| || ||||| |||||||| Sbjct 7147 TGACTCTATTGAAAACGTCAAGCAAAAGATCCAGGACAAGGAGGGCATTCCCCCTGATCA 7206 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 |||||||| || || | || || || ||||||||||| | ||| | || || || || Sbjct 7207 GCAACGTTTGATCTTTGCCGGCAAGCAGCTTGAAGATGGCCGCACTCTTGCAGACTACAA 7266 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 || | ||||| | || ||||| || || | |||||| | ||| Sbjct 7267 CATCCAAAAGGAATCCACTCTTCATTTGGTGCTCAGACTGCGTGGA 7312 >seq21914 Length=1598 Score = 113 bits (124), Expect = 2e-19 Identities = 160/225 (71%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || ||| ||||||| || || || || | || || || || ||| Sbjct 392 ATGCAGATTTTCGTCAAGACATTGACTGGCAAGACCATCACCTTGGAAGTGGAGTCCTCT 451 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| || | ||||||| || |||||||||||||| || ||||| || || || Sbjct 452 GACAGCATCGAGAATGTTAAACAGAAGATTCAAGATAAGGAGGGCATTCCACCCGACCAG 511 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || || || || || |||| ||||| || || ||||| | ||| | || || ||||| Sbjct 512 CAGCGCTTGATCTTTGCAGGCAAACAGCTGGAGGATGGCCGCACTCTTGCAGACTATAAC 571 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 || | ||||| | || || || || || | ||| || | ||| Sbjct 572 ATCCAAAAGGAGTCCACTCTGCATTTGGTGCTCAGATTGCGTGGA 616 >seq20128 Length=1734 Score = 113 bits (124), Expect = 2e-19 Identities = 160/225 (71%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || ||||| ||||||| || || ||||| ||||| || || ||| Sbjct 1317 ATGCAGATCTTTGTCAAAACTTTGACTGGCAAGACGATTACCCTTGAAGTGGAGAGCTCT 1376 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||| || | | || || || |||||||||||||| || || || ||||| || Sbjct 1377 GATAGCATCGAGAATGTGAAGCAGAAGATTCAAGATAAGGAGGGCATCCCCCCTGACCAG 1436 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || || |||| ||||| ||||| ||||| | || | || || || || Sbjct 1437 CAGCGTCTCATCTTTGCAGGCAAACAGCTTGAGGATGGCCGCACCCTCGCCGACTACAAC 1496 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 ||| | ||||| | || |||||| | || | | ||||||||| Sbjct 1497 ATTCAAAAGGAATCTACCCTTCACCTCGTGCTGCGCCTGAGAGGA 1541 >seq16312 Length=2383 Score = 111 bits (122), Expect = 6e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || ||||| || ||||| || || |||||||| || |||||||||||| Sbjct 2084 ATGCAAATCTTTGTAAAAACGCTCACTGGAAAGACCATTACTCTGGAAGTTGAATCATCT 2143 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| || | || ||||| || || || ||||| || ||||| || || ||| Sbjct 2144 GACAGCATCGAGAACGTCAAGCAAAAGATCCAGGACAAGGAGGGCATTCCACCCGACCAA 2203 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||| | || ||| | || || ||||| || ||||| | || | || || || || Sbjct 2204 CAACGTCTGATCTTCGCTGGTAAGCAACTCGAGGATGGTCGCACACTAGCTGACTACAAC 2263 Query 391230 ATTGATAAGGATGCAACACTTCAC 391253 || | ||||| | || |||||| Sbjct 2264 ATCCAGAAGGAGTCCACTCTTCAC 2287 >seq4310 Length=8047 Score = 109 bits (120), Expect = 2e-18 Identities = 159/225 (71%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || ||||||| || |||||||| || || || ||||| ||| Sbjct 264 ATGCAAATCTTCGTGAAGACTTTGACTGGCAAGACTATTACCCTCGAAGTGGAATCCTCT 205 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || |||||| | ||||| || || ||||| ||||| || ||||| ||||||||| Sbjct 204 GACTCTATTGAAAACGTCAAACAGAAGATCCAAGACAAGGAGGGCATTCCACCTGATCAA 145 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || ||| | || || || || || ||||| | || | || || || || Sbjct 144 CAGCGTCTCATCTTCGCTGGTAAGCAGCTGGAGGATGGCCGCACGCTAGCTGACTACAAC 85 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 || | ||||| | || || || || ||| | | || |||||| Sbjct 84 ATCCAAAAGGAATCCACCCTCCATTTGGTACTGCGTCTAAGAGGA 40 >seq6315 Length=1928 Score = 104 bits (114), Expect = 9e-17 Identities = 158/225 (70%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || ||||||| || || ||||| || || || ||||| ||| Sbjct 1602 ATGCAAATCTTCGTGAAGACTTTGACTGGAAAGACCATTACCCTCGAAGTGGAATCCTCT 1661 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || |||||| | || ||||| || ||||| ||||| || ||||| ||||||||| Sbjct 1662 GACTCGATTGAAAACGTCAAGCAAAAGATCCAAGACAAGGAGGGCATTCCCCCTGATCAA 1721 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || || | || ||| | || || || || || ||||| | || | || || || || Sbjct 1722 CAGCGCCTCATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTAGCTGACTACAAC 1781 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 || | ||||| | || || ||||| || | | ||||||||| Sbjct 1782 ATCCAGAAGGAATCCACCCTCCACTTGGTCCTTCGCCTGAGAGGA 1826 >seq23100 Length=704 Score = 100 bits (110), Expect = 1e-15 Identities = 157/225 (70%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || || || ||||||| || || ||||| || || ||||| ||| Sbjct 337 ATGCAAATCTTTGTGAAGACTTTGACTGGAAAGACAATTACCCTCGAGGTTGAGAGCTCT 396 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || ||||| | || ||||| |||||||||||||| || ||||| ||||||||| Sbjct 397 GACTCTATTGAGAACGTCAAGCAAAAGATTCAAGATAAGGAGGGCATTCCCCCTGATCAA 456 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || || | || ||| | || || || || || ||||| | || |||| || || || Sbjct 457 CAGCGCCTCATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTGGCTGACTACAAC 516 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 || | ||||| | || |||||||| || | | ||||| ||| Sbjct 517 ATCCAGAAGGAATCTACTCTTCACTTGGTGCTTCGCCTGAGGGGA 561 >seq17103 Length=3258 Score = 95.1 bits (104), Expect = 5e-14 Identities = 160/228 (70%), Gaps = 3/228 (1%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || |||||||| ||| |||| || || ||||| ||| | || || || ||| Sbjct 2099 ATGCAAATCTTCGTTAAGACATTGACAGGCAAGACTATCACTTTAGAGGTGGAGAGCTCT 2158 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAA-GGAAGGAATTCCTCCTGATCA 391168 |||| ||| || | || ||||| || || || || |||||| ||||||||||| || Sbjct 2159 GATAGCATCGAGAACGTGAAGCAAAAGATACAGGACAAAGGAAGGCATTCCTCCTGACCA 2218 Query 391169 ACAACGTTTAATTTTC-TCAGGGAAACAACTTGAAGATGGAAGAACTTTG-GCGGATTAT 391226 ||||| || || ||| | || || || || || ||||| | || || || || ||| Sbjct 2219 GCAACGATTGATCTTCGACTGGCAAGCAGCTGGAGGATGGCCGCACGCTGCGCTGACTAT 2278 Query 391227 AATATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 || || | ||||| | |||||||| || || | | ||||| ||| Sbjct 2279 AACATCCAGAAGGAGTCCACACTTCATTTGGTGCTTCGCCTGAGGGGA 2326 >seq25074 Length=2226 Score = 93.3 bits (102), Expect = 2e-13 Identities = 155/224 (69%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || |||| || || || |||||||||| || ||||| || Sbjct 441 ATGCAAATCTTCGTGAAGACTTTGACCGGAAAGACCGTTACTCTTGAGGTGGAATCCTCA 382 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || |||||| | || || || ||||| || |||||||| || || ||||||||| Sbjct 381 GACTCTATTGAAAACGTCAAGCATAAGATTCAGGACAAGGAAGGCATCCCACCTGATCAA 322 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || ||| | || || || || || || || | || | || || || || Sbjct 321 CAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAGGACGGTCGCACCCTTGCAGACTACAAC 262 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | ||||| | || || ||||| || | | |||||||| Sbjct 261 ATCCAAAAGGAGTCCACCCTCCACTTGGTGCTCCGCCTGAGAGG 218 >seq6893 Length=2528 Score = 93.3 bits (102), Expect = 2e-13 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || ||||||| || || ||||| || || || ||||| ||| Sbjct 131 ATGCAAATCTTCGTGAAGACTTTGACTGGAAAGACGATTACCCTCGAGGTGGAATCCTCT 72 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || |||||| | || ||||| |||||||| |||||||| ||||| ||||||||| Sbjct 71 GACTCTATTGAAAACGTCAAGCAAAAGATTCAAGACAAGGAAGGCATTCCCCCTGATCAA 12 Query 391170 CAACGT 391175 || ||| Sbjct 11 CAGCGT 6 >seq30220 Length=1492 Score = 87.8 bits (96), Expect = 7e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || ||||| ||||||| || || || || || || ||||| || Sbjct 1332 ATGCAGATCTTTGTCAAAACTTTGACTGGCAAGACCATCACCCTCGAGGTTGAGAGCTCG 1273 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| | | || || || || || || ||||| || || || || || ||| Sbjct 1272 GACAGCATTGAGAATGTAAAGCAGAAGATCCAGGACAAGGAGGGCATCCCACCCGACCAA 1213 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||||| || || |||| || || || |||||||| | || ||||| || || || Sbjct 1212 CAACGTTTGATCTTTGCAGGCAAGCAGCTCGAAGATGGTCGCACCTTGGCCGACTACAAC 1153 Query 391230 ATTGATAAGGA 391240 || | ||||| Sbjct 1152 ATCCAGAAGGA 1142 >seq49444 Length=335 Score = 86.0 bits (94), Expect = 2e-11 Identities = 153/221 (69%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 391056 ATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAAC 391115 || || || ||||| ||||||| || || ||||| ||||| || || ||||| | | Sbjct 49 ATCTTTGTCAAAACTTTGACTGGCAAGACCATTACCCTTGAAGTGGAGAGCTCTGACAGC 108 Query 391116 ATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCT-GA-TCAACAAC 391173 || || | ||||| || |||||||||||||| || || || ||| || |||||| | Sbjct 109 ATCGAGAACGTAAAACAGAAGATTCAAGATAAGGAGGGCATCCCACCTCGACTCAACAGC 168 Query 391174 GTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTG 391233 || | || || |||| || || || || ||||| | || | || || || || || Sbjct 169 GTCTCATCTTTGCAGGCAAGCAGCTCGAGGATGGCCGCACCCTTGCAGACTACAACATCC 228 Query 391234 ATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 | ||||| | || || ||||| || | | || |||||| Sbjct 229 AAAAGGAATCTACCCTCCACTTGGTGCTCCGCCTTAGAGGA 269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1974260471704152