Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20comandoni_20[genbank_20GCA_5F002025285.1_202017-03- 13] 57,594 sequences; 86,214,659 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq310 250 5e-61 seq663 223 6e-53 seq24165 152 1e-31 >seq310 Length=11085 Score = 250 bits (276), Expect = 5e-61 Identities = 1195/1872 (64%), Gaps = 68/1872 (4%) Strand=Plus/Plus Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612 || || ||||| | | ||||| |||| ||||||||| |||||||| || |||||| Sbjct 173 ACGGTGAACTGGATGGCGTCAGCGGCAGGGCGGGTGCGTAGGTAGTACATTCCAGTCTTT 232 Query 212613 AGGCCCTTGCCCCAGCCGTGCATGTGCATTGCTGTGAGTTTCTTCAGCTTAATATTCTGG 212672 |||||||| ||| ||| | |||||| | |||||| | | || || Sbjct 233 AGGCCCTTCTTCCATGCGTAAAAGTGCATCGAGGTGAGTCTGGCGA-------ATGAGGG 285 Query 212673 TCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTG 212732 |||| ||| || || ||| ||| ||| || ||||| ||| | | ||| | | Sbjct 286 -----CTCGG---CCATATATACGTTGAGGCTCTGGCTTTGGTCGATGTACGCGGCTCGG 337 Query 212733 TCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCT 212792 ||||| |||||||| | || | | ||| | | |||||| || || ||| | | Sbjct 338 TCAGCTGCCATGTCCAAGAGAATACGCTGAGGAATCTCCCAAACAGTTTTGTAAAGGCGC 397 Query 212793 TTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCAGCTGC 212852 ||||| || |||| || ||| |||||||| || |||| | | |||| Sbjct 398 TTGAGCTCGCTAGGGATCTCGTCTATGGCTTGCACAGAGCCATTGTGGGCGATGAGCTTG 457 Query 212853 AGGCGCATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTG 212912 |||| | | |||||| |||||| | | |||| ||| || ||| |||| Sbjct 458 TTCTTCATGGCATGGTTCCACAGGCCCAGGTCCATCAGGTCTCTGAGCAAGTGTTCGTTG 517 Query 212913 ACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCG 212972 | | | ||||| || | | | | ||| ||| | || || ||||||||||| Sbjct 518 ATCACCGTAAAGTCTCCGGCCAAGATGCGCCTTGTGTAGATATTGGACGTGTAGGGCTCA 577 Query 212973 ATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGG 213032 | || ||| ||||| ||||| ||||| | ||| || || ||||| || || || || Sbjct 578 AAGCACTCATTGTTTCCCAGTATCTGGGAAGTAGAAGCCGTCGGCATAGGCGCGACAAGT 637 Query 213033 AGACTGTTCCTCACTCCGTGCTCGCCGATGAG-GCGCCGAAGCTCTGCCCAGTCCCATCT 213091 | || || | || |||||||| | ||| || || | | ||||| ||||| | Sbjct 638 AAGCTATTTCGCAGACCGTGCTCCACAATGCTTGCCTTGAGGGAC-GCCCAATCCCAACG 696 Query 213092 GCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCAC 213151 | || | |||| || ||||||||||||||||| | | ||||||||| Sbjct 697 GGAGGATGG---CTCG------ACATTCCACATGTCAAACTGAAGTAGACCTTTGCTCGT 747 Query 213152 GGGGCTGCCCTGGTAA--GAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCC 213209 ||| ||| || || | || |||||| || |||||||| |||||||| || | Sbjct 748 GGGAGAGCC--GGCAAATGTGGGGTAGGGCCCTTGCTCCTTTGCCAGCTCATTAGATGAT 805 Query 213210 TGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGG 213269 ||||| || ||||||| || ||||| || || | |||||| |||||| | Sbjct 806 GTGAGGGCGGCAAAGTAGATTGTCTCAAAAATGTCGCGGTTGAGGGCGCGTGCCTCTTCG 865 Query 213270 GACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCG 213329 | ||||| || | | |||| || ||||| || ||||| || || | ||| Sbjct 866 CTGTCCCAAGGCATGCGCAAGAGAAGGAAGACGTCAGCTAGGCCCTGTACGCCAAGGCCA 925 Query 213330 ATGGGTCTGTGTCTCAGGTTAGA---CTTGGAGCACTCCTCCAAG-GGGTAAAAGTTGCA 213385 ||||| ||||| | ||| || || || || || || ||||| ||||| Sbjct 926 ATGGGCCTGTGGCGTCTGTTGGAGTGCTCGG----CTTCTGGAACTGGGTAGTAGTTGAC 981 Query 213386 GTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTG 213445 ||| || | |||||| | |||||| ||| |||| ||| || | || | ||| || Sbjct 982 GTCTATCACCTTGTTCAAGTTGCGCGTGACCACCTTGACCACCTCAAAGAGCTTCTCATG 1041 Query 213446 ATTGAACA-CGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGC 213504 || |||| | | | || | | |||||| | |||| || || || || || | Sbjct 1042 ATCAAACATCATTTTCTCCTTG-TCCACAAATTTGGGCAAAGCCATTGAAGCAAGATTAC 1100 Query 213505 AAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATC 213564 | |||||||| || | | |||| ||| | || || || || |||||| ||| Sbjct 1101 ACACGGCCACTTCTTTGGGTGATGTGAACTGGACAATTTCAGTACAAAGGTTGGAACATT 1160 Query 213565 GGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAA-TCCTTGTAGAGCATG 213623 | |||||||| |||| ||| ||||| || || |||||| ||| |||||||||||||| Sbjct 1161 GAATGGTGCCGAGGTGCTGATGGTTGGATTTCGCGTTG-CAGTGGTCCTTGTAGAGCATA 1219 Query 213624 TAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTG 213683 || || | || ||||||| |||| | ||| || ||| || | ||||||| Sbjct 1220 TAAGGAGTACCAGTCTCTATTTGGGCCTCCAAGATAGCAAACCAAAGCTCTTGGGCCTTG 1279 Query 213684 ACCACCCGCCTGACAGCTCCGGGCGTAGC-CTCGTACTGTTCGTAGAGCTCGTTGAATTC 213742 || | ||||| | |||| | | || ||| || || ||| ||||| | ||||| Sbjct 1280 ACAGCACGCCTTGC----CCGGCCCTCGCGCTCATAGCGTGTGTACAGCTCCTCAAATTC 1335 Query 213743 GTGGCCCCAGACCCTGTCC---AGTCCCGGA-CAGGATGCGGGACACATGAGGCTCCAGT 213798 ||||| | |||| || || || | || ||| || | || ||||| Sbjct 1336 AGCTCCCCA---CTTGTCTTGAAGACCTGGTGCCTCATTGGGG-CAAAACAGTGACCAGT 1391 Query 213799 CCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGT 213858 | || | | ||||||| ||||||||| || || |||||||| || ||| || | Sbjct 1392 CTCCTCCGGCCTCCACTCTCTCCATGAACAGATCGGGTACCCACAGAGCATAGAAGAGAT 1451 Query 213859 CCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGT 213918 | |||| | | ||| ||| || ||| || ||| || | ||| |||||||||| Sbjct 1452 CTCTGGCTCGCTGCTCTTCCTTGCCGTGGTTCTTTTTCAGCTCCAAAAACTCAAAGATGT 1511 Query 213919 CCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CCGCCCTGGT 213975 |||||||||| ||||||| ||||| ||||| || ||| |||||| || || || | Sbjct 1512 CCGCGTGCCAAGGCTCCAGATAGATTGCAAATGCTCCCTTTCTCTTGCCACCACCTTGAT 1571 Query 213976 CCAC-CAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGT 214034 | || ||| | || |||| | | |||| | || | || ||||||||| Sbjct 1572 CTACGTAGCGT-GCTGTGTCGTTGTACACTCGCAACATTGGAATTAGACCGTTGGACGTG 1630 Query 214035 CCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCCCTATG 214094 ||||| || ||| || |||||| | || | | ||| || ||| ||||| Sbjct 1631 CCGTTCGTGCCCCTGATGTACGAGTTAGCAGCACGAATTTTGTGCACACTGAGACCTATT 1690 Query 214095 CCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATG 214154 || ||||| |||||| |||| || || | | | || || || || | ||| Sbjct 1691 CCTCCGGCACTCTTGGAAATCAAAGCACACTGTTTAAGTGTGTCATATATCCCTTCTATG 1750 Query 214155 CTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAG 214214 ||||| ||| | ||| | | ||||| || ||||| ||||| | || ||||| Sbjct 1751 CTGTCTTCTTGCATGTTAACGAGAAAGCACGAAGAAAGCTGTGGCCTTGGCGTGCCAGCA 1810 Query 214215 TTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTT-AGAGAGGAGCCTGTAGGTCTC 214273 |||||||| ||||| ||||||| | | | | ||||| |||| || | || ||||| Sbjct 1811 TTGAAAAGTGTGGGAGTGGCATGAGTGA-ACAGTTGTTGGGAGATCAGATTATATGTCTC 1869 Query 214274 CAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCACCTCATCAGCATGTGCTG 214333 || || | |||||| || || | || ||| | ||||| |||||| || Sbjct 1870 CAACACCGCTCTGATGTCAGTTTTATGCAGTCCTACAGCAACTCGCATCAACATGTGTTG 1929 Query 214334 GGGCCTCTCTATGGGTCCTTTGGGGCCC---TTGAGCAGGTAGGAGCGCTCCAGAGTCTT 214390 |||||| || | || ||| | | |||| || || |||||||||| ||||| Sbjct 1930 GGGCCTTTCCA-CAATC--TTGCCGTTCAATTTGAAGAGATAAGAGCGCTCCAATGTCTT 1986 Query 214391 GAACCCAAAGTA 214402 ||| ||||| || Sbjct 1987 GAAGCCAAAATA 1998 >seq663 Length=3190 Score = 223 bits (246), Expect = 6e-53 Identities = 1178/1853 (64%), Gaps = 66/1853 (4%) Strand=Plus/Minus Query 212571 TCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTTAGGCCCTTGCCCCAGCCG 212630 ||||| |||| ||||||||| |||||||| || |||||||||||||| ||| || Sbjct 3181 TCAGCGGCAGGGCGGGTGCGTAGGTAGTACATTCCAGTCTTTAGGCCCTTCTTCCATGCG 3122 Query 212631 TGCATGTGCATTGCTGTGAGTTTCTTCAGCTTAATATTCTGGTCATCCTCGTGGCCCAGA 212690 | | |||||| | |||||| | | || || |||| ||| | Sbjct 3121 TAAAAGTGCATCGAGGTGAGTCTGGCGA-------ATGAGGG-----CTCGG---CCATA 3077 Query 212691 TGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATG 212750 | || ||| ||| ||| || ||||| ||| | | ||| | |||||| |||||||| | | Sbjct 3076 TATACGTTGAGGCTCTGGCTTTGGTCGATGTACGCGGCTCGGTCAGCTGCCATGTCCAAG 3017 Query 212751 ATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAG 212810 | | | ||| | | |||||| || || ||| | | ||||| || |||| Sbjct 3016 AGAATACGCTGAGGAATCTCCCAAACAGTTTTGTAAAGGCGCTTGAGCTCGCTAGGGATC 2957 Query 212811 CCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCAGCTGCAGGCGCATGTCCTCGTTC 212870 || ||| |||||||| || |||| | | |||| |||| | | |||| Sbjct 2956 TCGTCTATGGCTTGCACAGAGCCATTGTGGGCGATGAGCTTGTTCTTCATGGCATGGTTC 2897 Query 212871 CAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTATCTGGAAGTCACCT 212930 || |||||| | | |||| ||| || ||| ||||| | | ||||| || Sbjct 2896 CACAGGCCCAGGTCCATCAGGTCTCTGAGCAAGTGTTCGTTGATCACCGTAAAGTCTCCG 2837 Query 212931 GAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCC 212990 | | | | ||| ||| | ||| |||||||||||||| | || ||| ||||| ||| Sbjct 2836 GCCAAGATGCGCCTTGTGTAGATGTTGGAAGTGTAGGGCTCAAAGCACTCATTGTTTCCC 2777 Query 212991 AGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCG 213050 || ||||| | ||| || || ||||| || || || || | || || | || ||| Sbjct 2776 AGTATCTGGGAAGTAGAAGCCGTCGGCATAGGTGCGACAAGTAAGCTATTTCGCAGGCCG 2717 Query 213051 TGCTCGCCGATGAG-GCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTCGTC 213109 ||||| | ||| || || | | ||||| ||||| | | || | || Sbjct 2716 TGCTCCACAATGCTTGCCTTGAGGGAC-GCCCAATCCCAACGGGAGGATGGCTCA----- 2663 Query 213110 CTTCACGTTCCACATGTCAAACTGCAAGATG-CCTTTGCTCACGGGGCTGCCCTGGTAA- 213167 || |||||||| |||||||| |||| | ||||||||| ||| ||| || || Sbjct 2662 ----ACATTCCACATATCAAACTG-AAGAAGACCTTTGCTCGAGGGAGAGCC--GGCAAA 2610 Query 213168 -GAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTA 213226 | || |||||| || |||||||| |||||||| || | ||||| || |||| Sbjct 2609 TGTGGGGTAGGGCCCTTGCTCCTTTGCCAGCTCATTAGATGATGTGAGGGCGGCAAAGTA 2550 Query 213227 GATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCAT 213286 ||| || ||||| || || | |||||| |||||| | ||||| Sbjct 2549 GATTGTCTCAAAAATGTCGCGGTTGAGGGCGCGTGCCTCTTCACTATCCCAAGGCATGCG 2490 Query 213287 CATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAG 213346 || | | |||| || ||||| || ||||| || || | || ||||| ||||| | Sbjct 2489 CAAGAGAAGGAAGACGTCAGCTAGGCCCTGTACGCCAAGACCAATGGGCCTGTGACGTCT 2430 Query 213347 GTTAGA---CTTGGAGCACTCCTCCAAG-GGGTAAAAGTTGCAGTCGATGATCTTGTTGA 213402 ||| || || || || || || ||||| ||||| ||| || | |||||| | Sbjct 2429 GTTGGAGTGCTCGG----CTTCTGGAACTGGGTAGTAGTTGACGTCTATCACCTTGTTCA 2374 Query 213403 GGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACA-CGTAGCCC 213461 |||||| ||| |||| ||| || | || | ||| |||| |||| | | | Sbjct 2373 AGTTGCGCGTGACCACCTTGACCACCTCAAAGAGCTTCTCATGATCAAACATCATTTTCT 2314 Query 213462 CCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGA 213521 || | | |||||| | ||||| || || || || || || |||||||| || | Sbjct 2313 CCTTG-TCCACAAATTTAGGCAAAGCCATTGAAGCAAGATTACATACGGCCACTTCTTTG 2255 Query 213522 GAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTC 213581 | |||| ||| | || ||||| || |||||| ||| | |||||||| |||| | Sbjct 2254 GGTGATGTGAACTGGACAATTTCGGTACAAAGGTTGGAACATTGAATGGTGCCGAGGTGC 2195 Query 213582 TGGTGGTTTGACTTTGCGTTGGCAGAA-TCCTTGTAGAGCATGTAGGGGGACCCGGTCTC 213640 || ||||| || || |||||| ||| || ||||||||||| || || | || ||||| Sbjct 2194 TGATGGTTGGATTTCGCGTTG-CAGTGGTCTTTGTAGAGCATATAAGGAGTACCAGTCTC 2136 Query 213641 TAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCTGACAGC 213700 || || | | ||| || ||| || | ||||||||| | ||||| | Sbjct 2135 TATTTGAGCCTCCAAGATAGCAAACCAAAGCTCTTGGGCCTTGACAGCACGCCTTGC--- 2079 Query 213701 TCCGGGCGTAGC-CTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGT 213759 |||| | | || ||| || || ||| ||||| | ||||| ||||| | ||| Sbjct 2078 -CCGGCCCTCGCGCTCATAGCGTGTGTACAGCTCCTCAAATTCAGCTCCCCA---CTTGT 2023 Query 213760 CC---AGTCCCGGA-CAGGATGCGGGACACATGAGGCTCCAGTCCCCGTCATCTCTGACT 213815 | || || || | || ||| || | || |||||| || | | ||| Sbjct 2022 CTTGAAGACCTGGTGCCTCATTGGGG-CAAAACAGTGACCAGTCTCCTCCGGCCTCCACT 1964 Query 213816 CTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCG 213875 |||| ||| || || || || |||||||| || ||| || || |||| | | ||| Sbjct 1963 CTCTCCATAAATAGATCGGGTACCCACAGAGCATAGAAGAGATCTCTGGCTCGCTGCTCT 1904 Query 213876 TCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCC 213935 ||| || ||| || ||| || || || |||||||||||||||||||| |||||| Sbjct 1903 TCCTTGCCGTGGTTCTTTTTCAGCTCCAGGAACTCAAAGATGTCCGCGTGCCAAGGCTCC 1844 Query 213936 ATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CCGCCCTGGTCCAC-CAGCCTGGCCAC 213991 | ||||| ||||| || ||| |||||| || || || || || ||| | || Sbjct 1843 AGATAGATTGCAAATGCTCCCTTTCTCTTGCCACCACCTTGATCTACGTAGCGT-GCTGT 1785 Query 213992 CATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTAT 214051 |||| | | |||| | || | || |||||||| |||||| || ||| || Sbjct 1784 GTCGTTGTACACTCGCAACATTGGAATTAGACCGTTGGATGTTCCGTTCGTGCCCCTGAT 1725 Query 214052 ATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGA 214111 |||||| | || | | ||| || ||| ||||| || ||||| |||||| Sbjct 1724 GTACGAGTTAGCAGCACGAATTTTGTGCACACTGAGACCTATTCCTCCGGCACTCTTGGA 1665 Query 214112 GATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTT 214171 |||| || || | | | || || || || | |||||||| ||| | ||| Sbjct 1664 AATCAAAGCACACTGTTTAAGTGTGTCATATATCCCTTCTATGCTGTCTTCTTGCATGTT 1605 Query 214172 CAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTGAAAAGCGTGGGGCT 214231 | | ||||| || ||||| || || | || ||||| |||||||| ||||| | Sbjct 1604 AACGAGAAAGCACGAAGAAAGCTGTGGTCTTGGCGTGCCAGCATTGAAAAGTGTGGGAGT 1545 Query 214232 GGCATGGATCATAAACTTGTT-AGAGAGGAGCCTGTAGGTCTCCAGGACTGAGGGGATGT 214290 |||||| | | | | ||||| |||| || | || ||||||| || | ||||| Sbjct 1544 GGCATGAGTGA-ACAGTTGTTGGGAGATCAGATTATATGTCTCCAACACAGCTCTGATGT 1486 Query 214291 CGTGCTTGTGGATCTGTAGAGCGCACCTCATCAGCATGTGCTGGGGCCTCTCTATGGGTC 214350 | || || | | ||| | ||||| |||||| ||||| || || | || Sbjct 1485 CAGTTTTATGCAGTCCCACAGCAACTCGCATCAACATGTGTTGGGGTCTTTCCA-CAATC 1427 Query 214351 CTTTGGGGC-CCTTGAGCAGGTAGGAGCGCTCCAGAGTCTTGAACCCAAAGTA 214402 || | | |||| || || |||||||||| |||||||| ||||| || Sbjct 1426 TTTCCGTTCAATTTGAAGAGATAAGAGCGCTCCAATGTCTTGAATCCAAAATA 1374 >seq24165 Length=2677 Score = 152 bits (168), Expect = 1e-31 Identities = 508/781 (65%), Gaps = 32/781 (4%) Strand=Plus/Minus Query 47842 GTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCCAT 47901 ||| || ||||| | |||||||||| || ||||| |||| | ||| || | ||||| Sbjct 2601 GTACTCGCCCACCTTCCTCTCAAAGAAATTCGTCTTGCCCTGTAGCGAAATCATTTCCAT 2542 Query 47902 GAAGAGGAAGGGGTTGGGTGTGTTATACACCC-GTGTCAGGCCCATCTGTTCCAGCAGGT 47960 | |||||||||||| | ||| || ||| | | || || | | || || Sbjct 2541 CCAAGGGAAGGGGTTGGCAGCGTTGTAGACCTTGGGGCAT-CCAAGAGCGACGAGAAGCC 2483 Query 47961 GATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGACA 48020 ||||| || |||| ||||||| ||||||| | |||||| || |||||| | Sbjct 2482 TGTCCGCCACAAACTCAATGTATTGGCACATGAGCTCGGCGTTCATTCCAATGAGGCCAA 2423 Query 48021 CGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCT 48080 | || | || || || | || |||||||| || | ||| || ||| | || || Sbjct 2422 CTGGAAGAGACTCTGATACGAATTCCTTCTCAATTTCCACAGCCTCCTTGATGATTTGGG 2363 Query 48081 TAACGCGGGACTCT-----GAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGC 48135 | |||| | | || ||| |||| | | || || ||||| | |||||| Sbjct 2362 T-----GGGAATATTCGTGGACGGTCGGTTG---ACGAGCATGCTGTAGAGGAGGCAGGC 2311 Query 48136 AAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGG 48195 |||||| | || | ||| || || | |||||| | | | ||| ||||||||| || || Sbjct 2310 AAAGTCGCAATGAAGGCCCTCATCTCTGCTGATCAACTCATTGCTGAAGCAGAGGCCTGG 2251 Query 48196 CATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCC 48255 ||||| ||||||| |||||||| || || | ||| || ||||||||||| || Sbjct 2250 CATGAGGCCCCTCTTCTTGAGCCAAAAGATGGAACAGAAGCTCCCCGAGAAGAAGATACC 2191 Query 48256 CTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAA---GCG---TTCTTGTCTGA 48309 |||||| || ||||| || | ||||| ||| | | ||| ||| || Sbjct 2190 CTCCACAGCGGCGAATGCCACTAATCTCTCAGGGAATGTATCTGCGCCAGCCTTTTC--- 2134 Query 48310 GATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCG 48369 ||||| || ||||| || || |||||||||| | |||| ||| || ||||| Sbjct 2133 AATCCATTTGAGGGCCCATTCAGCTTTCTTCTTGACAGAAGGCACCGTTTCGATGGCATT 2074 Query 48370 GAAGA---GCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTA 48426 ||||| | | ||| ||| ||| |||| || || || | || | || Sbjct 2073 GAAGAGGCGATCCTT---CTCTGCTGGGTCCTTCACGTAAGTGTCTATCAAGAGCGAATA 2017 Query 48427 CATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAA 48486 ||| || ||||| | ||||| || |||||||| || ||||||||| | |||||| Sbjct 2016 CATTTCCGAGTGAATGTTCTCAATGGCGATCTGAAAGCCGTAGAAGCAGCGAGCCTCAGG 1957 Query 48487 CACCTGCACTTCTGTGGAGAATCTCTCCAG-CAGATTCTCATTGACTATCCCATCTGAAG 48545 | ||| || || || ||| | |||| || |||||| | || || ||||| || | Sbjct 1956 GATCTGAACCTCGGTCATGAAGC-GACCAGCCAAGTTCTCAGTCACAATGCCATCAGATG 1898 Query 48546 CAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCC 48605 ||||||||||||| | ||| ||| | || || ||| | |||||||| |||| Sbjct 1897 CAGCAAAGAAGGCCAATACAGATTTTATAAAGTGTTTCTCATCTGCGGTGAGAGAGTTCC 1838 Query 48606 A 48606 | Sbjct 1837 A 1837 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 930862166248960