Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20comandoni_20[genbank_20GCA_5F002025285.1_202017-03- 13] 57,594 sequences; 86,214,659 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq15228 87.8 2e-12 >seq15228 Length=999 Score = 87.8 bits (96), Expect = 2e-12 Identities = 71/86 (83%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 147000 GGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCAT 147059 ||| |||||| ||||||||| | |||||| || || |||||||| || |||| |||||| Sbjct 20 GGCAACCATGCGGGTGAGCAGAGCGTAGCTCGCAATATTGAAGGGAACTCCCAAGCCCAT 79 Query 147060 GTCCCCCGACCTCTGGTACAGCTGGC 147085 ||| | ||||||||||||| ||||| Sbjct 80 GTCAGCAGACCTCTGGTACATCTGGC 105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583067932401600