Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20comandoni_20[genbank_20GCA_5F002025285.1_202017-03- 13] 57,594 sequences; 86,214,659 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq310 154 2e-32 seq663 138 1e-27 seq24165 113 5e-20 >seq310 Length=11085 Score = 154 bits (170), Expect = 2e-32 Identities = 1078/1692 (64%), Gaps = 61/1692 (4%) Strand=Plus/Plus Query 78186 GCGTGTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCAT 78245 ||| || || | |||||||| || ||||| || |||||||||||| |||| | |||||| Sbjct 202 GCGGGTGCGTAGGTAGTACATTCCAGTCTTTAGGCCCTTCTTCCATGCGTAAAAGTGCAT 261 Query 78246 ACTCGACAGCTTGGCCAGACTCGGGTTCT-CCATGAAGATGTTGAGCGACTGGGACTGGT 78304 | || |||| | | ||| || |||| | | |||||| |||| |||| Sbjct 262 CGAGGTGAGTCTGGCGA-ATGAGGGCTCGGCCATATATACGTTGAGGCTCTGGCTTTGGT 320 Query 78305 CGATGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTT--TGCGGAATCTCCCA 78362 |||||||||| | ||||| || |||||||| | || || | || ||||||||||| Sbjct 321 CGATGTACGCGGCTCGGTCAGCTGCCATGTCCAAGA--GAATACGCTGAGGAATCTCCCA 378 Query 78363 GATGGTCCGGTAAATGGCCTTCAGCTCTTCCTGGAT---GTCCAGCGCTTGTACGCTCCC 78419 | || ||||| | ||| ||||| |||| ||| | ||||| || || Sbjct 379 AACAGTTTTGTAAAGGCGCTTGAGCTCGCTAGGGATCTCGTCTATGGCTTGCACAGAGCC 438 Query 78420 ACCG-GCTCGCACAATTTCATTCTTAATTTGAGGGTTCCAGCGATTGATCTTCTGAAGAT 78478 | | | || | || ||||| || | ||||||| | | | | || | Sbjct 439 ATTGTGGGCGATGAGCTTG-TTCTTCATGGCATGGTTCCACAGGCCCAGGTCCATCAGGT 497 Query 78479 CCCGGACCAGGTGCCGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAGA 78538 | | || || ||| ||| |||| || || ||||||| | | || | ||||| Sbjct 498 CTCTGAGCAAGTGTTCGTTGATCACCGTAAAGTCTCCGGCCAAGATGCGCCTTGTGTAGA 557 Query 78539 TGTTGGTCGTGTACGGCTCGAAAGC-CTCGTTGTTCCCCATGATCTGGGCGGTCGAGGCG 78597 | |||| |||||| ||||| ||||| ||| ||||| |||| ||||||| || || || Sbjct 558 TATTGGACGTGTAGGGCTC-AAAGCACTCATTGTTTCCCAGTATCTGGGAAGTAGAAGCC 616 Query 78598 GTCGGCATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGAT-CTCGACCTT 78656 |||||||| || ||||| |||| ||| || ||||| ||| | || || | |||| Sbjct 617 GTCGGCATAGGCGCGACAAGTAAGCTATTTCGCAGACCGTGCTCCACAATGCTTG-CCTT 675 Query 78657 TAGGC-CG-----TCCCAAAATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAGGAT 78710 ||| || |||||| | | ||| ||||||||| ||||| | Sbjct 676 GAGGGACGCCCAATCCCAACGGGAGGATGGCTCGACATTCCACATGTCAAACTGAAGTAG 735 Query 78711 ACCCTCGGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTC 78770 ||| | | || || || || || || ||| | || | |||||| || || || Sbjct 736 ACCTTTGCTCGTGGGAGAGCCGGCAAATGTGGGGTAGGGCCCTTGCTCCTTTGCCAGCTC 795 Query 78771 GCATGACTCGAGC--AGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCG 78828 || | || ||||| || ||| | | ||| || ||| | |||||| || Sbjct 796 --ATTAGATGATGTGAGGGCGGCAAAGTAGATTGTCTCAAAAATGTCGCGGTTGAGGGCG 853 Query 78829 CGCGCCTTGGTCTC-GTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTG 78887 || |||| || | ||| | | | || | | | |||||| || || |||||||| Sbjct 854 CGTGCCTCT-TCGCTGTCCCAAGGCATGCGCAAGAGAAGGAAGACGTCAGCTAGGCCCTG 912 Query 78888 GACGCCGATAGCGATCGGTCGGTGGCGCATGTTGCTCTT-TCGGGCCGCCTCGGTC-GGG 78945 ||||| | | || || | |||||| ||||| | |||| | || | | ||| Sbjct 913 TACGCCAAGGCCAATGGGCCTGTGGCGTCTGTTGGAGTGCTCGG--CTTCTGGAACTGGG 970 Query 78946 TAAAAGTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTAC 79005 || |||| || || || ||||| ||| |||||||| ||| |||||| | Sbjct 971 TAGTAGTTGACGTCTATCACCTTGTTCAAGTTGCGCGTGACCACCTTGACCACCTCAAAG 1030 Query 79006 AATTTGGCGAAATCAAA-ATGATTTCCT--TTGATGA-AAGTCGGTAGGCACAGCGAT-- 79059 | || | |||||| || |||| || ||| | || | | |||| ||| || Sbjct 1031 AGCTTCTCATGATCAAACATCATTTTCTCCTTGTCCACAAATTTG--GGCAAAGCCATTG 1088 Query 79060 --GCCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACA 79117 || || || ||||||||| || | || | | || || ||||| || || | Sbjct 1089 AAGCAAGATTACACACGGCCACTTCTTTGGGTGATGTGAACTGGACAATTTCAGTACAAA 1148 Query 79118 AATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCT 79177 || || | | |||||||||| || || |||||| ||| |||| ||| ||||| Sbjct 1149 GGTTGGAACATTGAATGGTGCCGAGGTGCTGATGGTTGGATTTCGCGTTGCAGTGGTCCT 1208 Query 79178 TGTAGCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGT 79237 ||||| ||| || || || || ||||| | || || | | | ||| | | Sbjct 1209 TGTAGAGCATATAAGGAGTACCAGTCTCTATTTGGGCCTCCAAGATAGCAAACCAAAGCT 1268 Query 79238 CCCGGGCCCGGACAAC-CTTCTTGTACCGACCCTGTGCGA-CGTA-CGTCCGGTACAACT 79294 | ||||| |||| | | |||| ||| |||| ||| | || ||| | |||| || Sbjct 1269 CTTGGGCCTTGACAGCACGCCTTGC-CCGGCCCTC-GCGCTCATAGCGTGTG-TACAGCT 1325 Query 79295 CGTTGAAAGC--CTCCCCA-TAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCA 79351 | | || | ||||||| | | | | | || || || ||| | ||||| | || Sbjct 1326 CCTCAAATTCAGCTCCCCACTTGTCTT---GAAGACCTGGTGCCTCATTGGGGCAAAACA 1382 Query 79352 GGTGCCAGTCCTCGTCCTTC-TCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCC 79410 | |||||| || ||| | || || |||||||||| || || || | |||||| || Sbjct 1383 GTGACCAGTC-TCCTCCGGCCTCCACTCTCTCCATGAACAGATCGGGTACCCACAGAGCA 1441 Query 79411 GTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAG 79470 |||||| || | | ||| ||| || | ||| |||||| |||||| | ||| Sbjct 1442 TAGAAGAGATCTCTGGCTCGCTGCTCTTCCTTGCCGTGGTTCTTTTTCAGCTCCAAAAAC 1501 Query 79471 TCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCG 79530 || | |||||| |||||||| |||||||||||||| || || | ||||| | |||||| Sbjct 1502 TCAAAGATGTCCGCGTGCCAAGGCTCCAGATAGATTGCAAATGCTCCCTTTCTCTTGCCA 1561 Query 79531 CCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCG 79590 || || || | ||||| || || |||| |||| | ||||| | ||| || | | ||| Sbjct 1562 CCACCTTGATCTACGTAGCGTGCTGTGTCGTTGTACACTCGCAACATTGGAATTAGACCG 1621 Query 79591 TCGGCGACGCCGTTCGTCCCGTTGA--TTCGTGTACCGCTCGCCCGAATGTTCGAGCA-G 79647 | || ||||||||| || ||| | || || || || ||||| || | ||| Sbjct 1622 TTGGACGTGCCGTTCGTGCCCCTGATGTACGAGT-TAGC-AGCACGAAT-TTTGTGCACA 1678 Query 79648 TGGATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAG 79707 || || || || |||| | |||||| || || |||| || || || || || Sbjct 1679 CTGAGACCTATTCCTCCGGCACTCTTGGAAATCAAAGCACACTGTTTAAGTGTGTCATAT 1738 Query 79708 ATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTG 79767 || || || || ||| || | ||| || || ||||| || | |||||| | Sbjct 1739 ATCCCTTCTATGCTGTCTTCTTGCATGTTAACGAGAAAGCACGAAGAAAGCTGTGGCCTT 1798 Query 79768 TTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGA 79827 ||| || || ||||| || || || || || || ||||| | | |||| |||||| Sbjct 1799 GGCGTGCCAGCATTGAAAAGTGTGGGAGTGGCATGAGTGAACAGTTGTTGGGAGATCAGA 1858 Query 79828 TCGTACGTCTCC 79839 | || |||||| Sbjct 1859 TTATATGTCTCC 1870 Score = 93.3 bits (102), Expect = 5e-14 Identities = 305/472 (65%), Gaps = 8/472 (2%) Strand=Plus/Minus Query 19166 GAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAAC 19225 |||||||| | ||||| ||| | | ||||| || || || || || |||||||| Sbjct 1869 GAGACATATAATCTGATCTCCCAACAACTGTTCACTCATGCCACTCCCACACTTTTCAAT 1810 Query 19226 GCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGC 19285 || || ||| | || ||| | || || || || || ||| | || |||||| Sbjct 1809 GCTGGCACGCCAAGGCCACAGCTTTCTTCGTGCTTTCTCGTTAACATGCAAGAAGACAGC 1750 Query 19286 ATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGT 19345 || || || || || || || || || |||| || || |||||| | |||| || Sbjct 1749 ATAGAAGGGATATATGACACACTTAAACAGTGTGCTTTGATTTCCAAGAGTGCCGGAGGA 1690 Query 19346 ATCGGGATCCAC-TGCTCGAATATCCGGTCG---AGTGGTACACGAATCAATGGGACGAA 19401 || || || ||| | || || | | | | ||||| ||| || ||||| Sbjct 1689 ATAGGTCTCAGTGTGCACAAAATTCGTGCTGCTAACTCGTACA----TCAGGGGCACGAA 1634 Query 19402 CGGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGT 19461 ||| || ||||| | | |||||| | || || | |||| |||| || | ||||| Sbjct 1633 CGGCACGTCCAACGGTCTAATTCCAATGTTGCGAGTGTACAACGACACAGCACGCTACGT 1574 Query 19462 CAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGC 19521 | || || || ||||| | ||||| | || || ||||| || ||||| |||||||| Sbjct 1573 AGATCAAGGTGGTGGCAAGAGAAAGGGAGCATTTGCAATCTATCTGGAGCCTTGGCACGC 1514 Query 19522 GGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCG 19581 |||| || | || || | || ||| |||||| || | || ||| ||| | Sbjct 1513 GGACATCTTTGAGTTTTTGGAGCTGAAAAAGAACCACGGCAAGGAAGAGCAGCGAGCCAG 1454 Query 19582 CGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAG 19633 || |||||| || ||||| | || || || |||||||||| || ||| Sbjct 1453 AGATCTCTTCTATGCTCTGTGGGTACCCGATCTGTTCATGGAGAGAGTGGAG 1402 >seq663 Length=3190 Score = 138 bits (152), Expect = 1e-27 Identities = 1075/1694 (63%), Gaps = 65/1694 (4%) Strand=Plus/Minus Query 78186 GCGTGTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCAT 78245 ||| || || | |||||||| || ||||| || |||||||||||| |||| | |||||| Sbjct 3170 GCGGGTGCGTAGGTAGTACATTCCAGTCTTTAGGCCCTTCTTCCATGCGTAAAAGTGCAT 3111 Query 78246 ACTCGACAGCTTGGCCAGACTCGGGTTCT-CCATGAAGATGTTGAGCGACTGGGACTGGT 78304 | || |||| | | ||| || |||| | | |||||| |||| |||| Sbjct 3110 CGAGGTGAGTCTGGCGA-ATGAGGGCTCGGCCATATATACGTTGAGGCTCTGGCTTTGGT 3052 Query 78305 CGATGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTT--TGCGGAATCTCCCA 78362 |||||||||| | ||||| || |||||||| | || || | || ||||||||||| Sbjct 3051 CGATGTACGCGGCTCGGTCAGCTGCCATGTCCAAGA--GAATACGCTGAGGAATCTCCCA 2994 Query 78363 GATGGTCCGGTAAATGGCCTTCAGCTCTTCCTGGAT---GTCCAGCGCTTGTACGCTCCC 78419 | || ||||| | ||| ||||| |||| ||| | ||||| || || Sbjct 2993 AACAGTTTTGTAAAGGCGCTTGAGCTCGCTAGGGATCTCGTCTATGGCTTGCACAGAGCC 2934 Query 78420 ACCG-GCTCGCACAATTTCATTCTTAATTTGAGGGTTCCAGCGATTGATCTTCTGAAGAT 78478 | | | || | || ||||| || | ||||||| | | | | || | Sbjct 2933 ATTGTGGGCGATGAGCTTG-TTCTTCATGGCATGGTTCCACAGGCCCAGGTCCATCAGGT 2875 Query 78479 CCCGGACCAGGTGCCGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAGA 78538 | | || || ||| ||| |||| || || ||||||| | | || | ||||| Sbjct 2874 CTCTGAGCAAGTGTTCGTTGATCACCGTAAAGTCTCCGGCCAAGATGCGCCTTGTGTAGA 2815 Query 78539 TGTTGGTCGTGTACGGCTCGAAAGC-CTCGTTGTTCCCCATGATCTGGGCGGTCGAGGCG 78597 |||||| ||||| ||||| ||||| ||| ||||| |||| ||||||| || || || Sbjct 2814 TGTTGGAAGTGTAGGGCTC-AAAGCACTCATTGTTTCCCAGTATCTGGGAAGTAGAAGCC 2756 Query 78598 GTCGGCATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGAT-CTCGACCTT 78656 |||||||| |||||||| |||| ||| || || || ||| | || || | |||| Sbjct 2755 GTCGGCATAGGTGCGACAAGTAAGCTATTTCGCAGGCCGTGCTCCACAATGCTTG-CCTT 2697 Query 78657 TAGGCCGTCCCAAAATTCATTCGCCGCGATCCC--------CCACATGTCCGGTTGAAGG 78708 ||| ||||| | | || ||| | |||||| || ||||| Sbjct 2696 GAGGGACGCCCAA--TCCCAACGGGAGGATGGCTCAACATTCCACATATCAAACTGAAGA 2639 Query 78709 ATACCCTCGGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGT 78768 | ||| | | || || || || || || ||| | || | |||||| || || Sbjct 2638 AGACCTTTGCTCGAGGGAGAGCCGGCAAATGTGGGGTAGGGCCCTTGCTCCTTTGCCAGC 2579 Query 78769 TCGCATGACTCGAGC--AGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCT 78826 || || | || ||||| || ||| | | ||| || ||| | |||||| Sbjct 2578 TC--ATTAGATGATGTGAGGGCGGCAAAGTAGATTGTCTCAAAAATGTCGCGGTTGAGGG 2521 Query 78827 CGCGCGCCT-TGGTCTCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCC 78885 |||| |||| | || | || | | | | || | | |||||| || || |||||| Sbjct 2520 CGCGTGCCTCTTCACTATCCCAAGGCATGCGCAAG-AGAAGGAAGACGTCAGCTAGGCCC 2462 Query 78886 TGGACGCCGATAGCGATCGGTCGGTGGCGCATGTTGCTCTT-TCGGGCCGCCTCGGTC-G 78943 || ||||| | | | || || | ||| || ||||| | |||| | || | | | Sbjct 2461 TGTACGCCAAGACCAATGGGCCTGTGACGTCTGTTGGAGTGCTCGG--CTTCTGGAACTG 2404 Query 78944 GGTAAAAGTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGT 79003 |||| |||| || || || ||||| ||| |||||||| ||| |||||| Sbjct 2403 GGTAGTAGTTGACGTCTATCACCTTGTTCAAGTTGCGCGTGACCACCTTGACCACCTCAA 2344 Query 79004 ACAATTTGGCGAAATCAAA-ATGATTTCCT--TTGATGA-AAGTCGGTAGGCACAGCGAT 79059 | | || | |||||| || |||| || ||| | || | |||||| ||| || Sbjct 2343 AGAGCTTCTCATGATCAAACATCATTTTCTCCTTGTCCACAAATT--TAGGCAAAGCCAT 2286 Query 79060 ----GCCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCA 79115 || || || || |||||| || | || | | || || ||||| || || Sbjct 2285 TGAAGCAAGATTACATACGGCCACTTCTTTGGGTGATGTGAACTGGACAATTTCGGTACA 2226 Query 79116 CAAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTC 79175 | || || | | |||||||||| || || |||||| ||| |||| ||| ||| Sbjct 2225 AAGGTTGGAACATTGAATGGTGCCGAGGTGCTGATGGTTGGATTTCGCGTTGCAGTGGTC 2166 Query 79176 CTTGTAGCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGAT 79235 |||||| ||| || || || || ||||| | ||| || | | | ||| | Sbjct 2165 TTTGTAGAGCATATAAGGAGTACCAGTCTCTATTTGAGCCTCCAAGATAGCAAACCAAAG 2106 Query 79236 GTCCCGGGCCCGGACAAC-CTTCTTGTACCGACCCTGTGCGA-CGTA-CGTCCGGTACAA 79292 || ||||| |||| | | |||| ||| |||| ||| | || ||| | |||| Sbjct 2105 CTCTTGGGCCTTGACAGCACGCCTTGC-CCGGCCCTC-GCGCTCATAGCGTGTG-TACAG 2049 Query 79293 CTCGTTGAAAGC--CTCCCCA-TAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACAT 79349 ||| | || | ||||||| | | | | | || || || ||| | ||||| | Sbjct 2048 CTCCTCAAATTCAGCTCCCCACTTGTCTT---GAAGACCTGGTGCCTCATTGGGGCAAAA 1992 Query 79350 CAGGTGCCAGTCCTCGTCCTTC-TCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGG 79408 ||| |||||| || ||| | || || ||||||| || || || || | |||||| | Sbjct 1991 CAGTGACCAGTC-TCCTCCGGCCTCCACTCTCTCCATAAATAGATCGGGTACCCACAGAG 1933 Query 79409 CCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAA 79468 | |||||| || | | ||| ||| || | ||| |||||| |||||| || | Sbjct 1932 CATAGAAGAGATCTCTGGCTCGCTGCTCTTCCTTGCCGTGGTTCTTTTTCAGCTCCAGGA 1873 Query 79469 AGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGC 79528 | || | |||||| |||||||| |||||||||||||| || || | ||||| | ||||| Sbjct 1872 ACTCAAAGATGTCCGCGTGCCAAGGCTCCAGATAGATTGCAAATGCTCCCTTTCTCTTGC 1813 Query 79529 CGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGC 79588 | || || || | ||||| || || |||| |||| | ||||| | ||| || | | | Sbjct 1812 CACCACCTTGATCTACGTAGCGTGCTGTGTCGTTGTACACTCGCAACATTGGAATTAGAC 1753 Query 79589 CGTCGGCGACGCCGTTCGTCCCGTTGA--TTCGTGTACCGCTCGCCCGAATGTTCGAGCA 79646 ||| || |||||||| || ||| | || || || || ||||| || | ||| Sbjct 1752 CGTTGGATGTTCCGTTCGTGCCCCTGATGTACGAGT-TAGC-AGCACGAAT-TTTGTGCA 1696 Query 79647 -GTGGATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGT 79705 || || || || |||| | |||||| || || |||| || || || || | Sbjct 1695 CACTGAGACCTATTCCTCCGGCACTCTTGGAAATCAAAGCACACTGTTTAAGTGTGTCAT 1636 Query 79706 AGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGT 79765 | || || || || ||| || | ||| || || ||||| || | |||||| Sbjct 1635 ATATCCCTTCTATGCTGTCTTCTTGCATGTTAACGAGAAAGCACGAAGAAAGCTGTGGTC 1576 Query 79766 TGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCA 79825 | ||| || || ||||| || || || || || || ||||| | | |||| |||| Sbjct 1575 TTGGCGTGCCAGCATTGAAAAGTGTGGGAGTGGCATGAGTGAACAGTTGTTGGGAGATCA 1516 Query 79826 GATCGTACGTCTCC 79839 ||| || |||||| Sbjct 1515 GATTATATGTCTCC 1502 Score = 111 bits (122), Expect = 2e-19 Identities = 309/472 (65%), Gaps = 8/472 (2%) Strand=Plus/Plus Query 19166 GAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAAC 19225 |||||||| | ||||| ||| | | ||||| || || || || || |||||||| Sbjct 1503 GAGACATATAATCTGATCTCCCAACAACTGTTCACTCATGCCACTCCCACACTTTTCAAT 1562 Query 19226 GCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGC 19285 || || ||| | || ||| | || || || || || ||| | || |||||| Sbjct 1563 GCTGGCACGCCAAGACCACAGCTTTCTTCGTGCTTTCTCGTTAACATGCAAGAAGACAGC 1622 Query 19286 ATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGT 19345 || || || || || || || || || |||| || || |||||| | |||| || Sbjct 1623 ATAGAAGGGATATATGACACACTTAAACAGTGTGCTTTGATTTCCAAGAGTGCCGGAGGA 1682 Query 19346 ATCGGGATCCAC-TGCTCGAATATCCGGTCG---AGTGGTACACGAATCAATGGGACGAA 19401 || || || ||| | || || | | | | ||||| ||| || ||||| Sbjct 1683 ATAGGTCTCAGTGTGCACAAAATTCGTGCTGCTAACTCGTACA----TCAGGGGCACGAA 1738 Query 19402 CGGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGT 19461 |||| | || ||||| | | |||||| | || || | |||| |||| || | ||||| Sbjct 1739 CGGAACATCCAACGGTCTAATTCCAATGTTGCGAGTGTACAACGACACAGCACGCTACGT 1798 Query 19462 CAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGC 19521 | || || || ||||| | ||||| | || || ||||| || ||||| |||||||| Sbjct 1799 AGATCAAGGTGGTGGCAAGAGAAAGGGAGCATTTGCAATCTATCTGGAGCCTTGGCACGC 1858 Query 19522 GGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCG 19581 |||| || | || ||||| || ||| |||||| || | || ||| ||| | Sbjct 1859 GGACATCTTTGAGTTCCTGGAGCTGAAAAAGAACCACGGCAAGGAAGAGCAGCGAGCCAG 1918 Query 19582 CGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAG 19633 || |||||| || ||||| | || || ||||| ||||||| || ||| Sbjct 1919 AGATCTCTTCTATGCTCTGTGGGTACCCGATCTATTTATGGAGAGAGTGGAG 1970 >seq24165 Length=2677 Score = 113 bits (124), Expect = 5e-20 Identities = 468/726 (64%), Gaps = 22/726 (3%) Strand=Plus/Plus Query 59707 TGGCCTTCTTCGCGGCGAGTGATGGAATTGTGATGGAAAATATAGACATGAACTTTTCC- 59765 |||||||||| || || |||||| ||||||| || || | | || | ||| Sbjct 1883 TGGCCTTCTTTGCTGCATCTGATGGCATTGTGACTGAGAACTTGGC--TGGTCGCTTCAT 1940 Query 59766 -AAGGATGTCCAGATTGCCGAGGCCCGGTCGTTCTACGCGTATCAG-TCGTTCAACGAGT 59823 | || || ||||| | ||||| || | ||||||| | |||| ||| || ||| Sbjct 1941 GACCGAGGTTCAGATCCCTGAGGCTCGCTGCTTCTACGGCTTTCAGATCGC-CATTGAGA 1999 Query 59824 CTATCCACTCCGAGACGTACTCGCTCATGATCGATAAGTTGGTCAAGGATCCGGAAGAGA 59883 || ||||| || | ||| |||||| |||| || | | || ||||| || | ||||| Sbjct 2000 ACATTCACTCGGAAATGTATTCGCTCTTGATAGACACTTACGTGAAGGACCCAGCAGAGA 2059 Query 59884 AGGCTGGTCTGTTCCGTGCCATAGAGACGTCCCCCGCAGTTAAACAAAAAGCAGAATGGG 59943 ||| | | || ||| |||||| || ||| || | || || | ||||| ||||||| Sbjct 2060 AGGATCGCCTCTTCAATGCCATCGAAACGGTGCCTTCTGTCAAGAAGAAAGCTGAATGGG 2119 Query 59944 CCATGCAGTGGATG---AGTCCTGGAGCAT---CATTTGCACAACGTCTCATAGCTTTTG 59997 || | | ||||| | |||| ||| |||| | | | | | || || | Sbjct 2120 CCCTCAAATGGATTGAAAAGGCTGGCGCAGATACATTCCCTGAGAGATTAGTGGCATTCG 2179 Query 59998 CATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGC 60057 | ||||| || ||||||||||| || |||||| | || || |||||||| ||| Sbjct 2180 CCGCTGTGGAGGGTATCTTCTTCTCGGGGAGCTTCTGTTCCATCTTTTGGCTCAAGAAGA 2239 Query 60058 GTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCC 60117 | ||||||||||| ||||| | ||| ||| ||| |||| | | || |||||||| | Sbjct 2240 GGGGCCTCATGCCAGGCCTCTGCTTCAGCAATGAGTTGATCAGCAGAGATGAGGGCCTTC 2299 Query 60118 ATCAGGAGTTTGCAGTGACGCTCTATTCACACCTATTGGAAAAATGCCCTTCCAAGGATA 60177 || || ||||| || | | || | || | | | | || | || |||| | ||| Sbjct 2300 ATTGCGACTTTGC-CTGCCTC-CTCTACA-GCATGCTCGTCAACCGACCGTCCACGAATA 2356 Query 60178 TTCACA---AGATTGTTCAGTGGGCTTGTGAAGTGGAGAGCGAGTTCATCACAGAAGCGC 60234 ||| || | || | || |||| ||| | |||| || ||| | |||| | | Sbjct 2357 TTCCCACCCAAATCATCAAGGAGGCTGTGGAAATTGAGAAGGAATTCGTATCAGAGTCTC 2416 Query 60235 TTCCATGCAAACTCATAGGTATGGACGCTGGAGAAATGACGCAGTACATTCAGTTTGTCG 60294 ||||| ||||| || ||| |||| | ||| || |||||| ||||||| | Sbjct 2417 TTCCAGTTGGCCTCATTGGAATGAACGCCGAGCTCATGTGCCAATACATTGAGTTTGTGG 2476 Query 60295 CGGACCGCCTCATGGCCCAGTTTGGAGAAGGACCAA--TTTACGGCGTGAATAACCCTTT 60352 ||||| | || | | | ||| || | |||| | ||| || ||||| || Sbjct 2477 CGGACAGGCTTCTCGTCGCTCTTG--GATGCCCCAAGGTCTACAACGCTGCCAACCCCTT 2534 Query 60353 CGACTGGATGGAGACCATCTCGTTGGAAGGGAAGACCAACTTCTTTGAGAAGCGGGTCGG 60412 | |||||||| | || ||| | | || ||||| || |||||||||| | ||| || Sbjct 2535 CCCTTGGATGGAAATGATTTCGCTACAGGGCAAGACGAATTTCTTTGAGAGGAAGGTGGG 2594 Query 60413 GGATTA 60418 || || Sbjct 2595 CGAGTA 2600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548129903283360