Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20comandoni_20[genbank_20GCA_5F002025285.1_202017-03- 13] 57,594 sequences; 86,214,659 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq49354 138 8e-28 seq4039 129 4e-25 seq9092 123 2e-23 seq21914 118 7e-22 seq10997 118 7e-22 seq48723 114 9e-21 seq21456 114 9e-21 seq25074 113 3e-20 seq3581 113 3e-20 seq49259 111 1e-19 seq2942 109 4e-19 seq4310 107 1e-18 seq23136 105 5e-18 seq20128 105 5e-18 seq50001 98.7 7e-16 seq23330 96.9 2e-15 seq6315 95.1 8e-15 seq17585 87.8 1e-12 seq37486 86.0 4e-12 seq21227 86.0 4e-12 seq43176 82.4 5e-11 >seq49354 Length=412 Score = 138 bits (152), Expect = 8e-28 Identities = 166/226 (73%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 23612 TGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGG 23671 ||||||||||||| || || ||||| || || ||||| || |||||||| || ||| | | Sbjct 412 TGCAGATTTTCGTGAAGACGCTCACTGGCAAGACGATTACCCTCGAAGTGGAATCCTCAG 353 Query 23672 ACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAAC 23731 || | |||| | | || ||||| ||| ||||| || || | || || ||||||| Sbjct 352 ACTCGATTGAGAATGTCAAGCAAAAGATTCAAGACAAGGAGGGCATCCCACCTGATCAAC 293 Query 23732 AGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACA 23791 | ||| | || ||||| |||||||| || ||||||| || || || | ||| ||||||| Sbjct 292 AACGTCTGATCTTTGCAGGCAAACAGCTTGAAGACGGCCGTACCTTGGCCGACTACAACA 233 Query 23792 TACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 | || || ||||| || | ||||| || | | ||| ||||||| Sbjct 232 TTCAGAAGGAGTCTACTCTTCATTTGGTGCTTCGTTTGAGAGGAGG 187 Score = 100 bits (110), Expect = 2e-16 Identities = 133/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || ||| | || || || || ||||| | ||||| || | || Sbjct 185 ATGCAGATTTTCGTCAAGACCTTGACTGGCAAGACCATCACCTTGGAAGTGGAGAGCTCG 126 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 |||| |||| | | || || || || |||||||| ||| | || || || ||| Sbjct 125 GACAGCATTGAGAATGTGAAGCAGAAGATCCAGGACAAAGAGGGTATTCCACCTGACCAA 66 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || ||||| || ||||| |||||||| || || || | ||||| || | ||| |||||| Sbjct 65 CAACGTTTGATCTTTGCAGGCAAACAGCTCGAGGATGGCCGCACGTTGGCCGACTACAAC 6 Query 23791 ATACA 23795 || || Sbjct 5 ATCCA 1 >seq4039 Length=8492 Score = 129 bits (142), Expect = 4e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| || ||||| || || | || ||||| || ||||| ||||| || || ||| | Sbjct 7087 AATGCAAATCTTCGTGAAGACTTTGACTGGAAAGACCATCACCCTCGAGGTGGAATCCTC 7146 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||| || |||||| | || ||||| || ||||| || || | || || ||||| Sbjct 7147 TGACTCTATTGAAAACGTCAAGCAAAAGATCCAGGACAAGGAGGGCATTCCCCCTGATCA 7206 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || ||||| || ||||||||||| || || ||||| | |||||| | | || ||||| Sbjct 7207 GCAACGTTTGATCTTTGCCGGCAAGCAGCTTGAAGATGGCCGCACTCTTGCAGACTACAA 7266 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 ||| ||||| || ||||| | ||||| || | || |||| |||||| Sbjct 7267 CATCCAAAAGGAATCCACTCTTCATTTGGTGCTCAGACTGCGTGGAGGA 7315 >seq9092 Length=1269 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || || ||||| || || ||||| || |||||||| || ||| | Sbjct 45 ATGCAGATTTTCGTGAAGACGCTCACTGGCAAGACGATTACCCTCGAAGTGGAATCCTCA 104 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||| | |||| | | || ||||| ||| ||||| || || | || || || || Sbjct 105 GACTCGATTGAGAATGTCAAGCAAAAGATTCAAGACAAGGAGGGCATCCCACCCGACCAG 164 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| || || ||||| |||||||| || || || | ||||| || | ||| |||||| Sbjct 165 CAGCGCTTGATCTTTGCAGGCAAACAGCTCGAGGATGGCCGCACGTTGGCCGACTACAAC 224 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 || || || || || || | ||| | || | || ||||| || ||| Sbjct 225 ATCCAGAAGGAATCTACTCTCCATCTGGTGCTTAGATTGCGTGGTGGA 272 >seq21914 Length=1598 Score = 118 bits (130), Expect = 7e-22 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || || | || || || || ||||| | ||||| || ||| | Sbjct 392 ATGCAGATTTTCGTCAAGACATTGACTGGCAAGACCATCACCTTGGAAGTGGAGTCCTCT 451 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||| | || ||| || ||||| || ||| || || || || | || || || || Sbjct 452 GACAGCATCGAGAATGTT-AAACAGAAGATTCAAGATAAGGAGGGCATTCCACCCGACCA 510 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||| || || ||||| |||||||| ||||| || | |||||| | | || || || Sbjct 511 GCAGCGCTTGATCTTTGCAGGCAAACAGCTGGAGGATGGCCGCACTCTTGCAGACTATAA 570 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 ||| ||||| |||||||| | ||||| || | || ||||| |||||| Sbjct 571 CATCCAAAAGGAGTCCACTCTGCATTTGGTGCTCAGATTGCGTGGAGGA 619 >seq10997 Length=1659 Score = 118 bits (130), Expect = 7e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || ||| | || || || || ||||| || || || || ||| | Sbjct 1572 ATGCAGATCTTCGTCAAGACCTTGACTGGCAAGACTATCACCCTTGAGGTCGAGTCCTCT 1513 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 |||| | || | | ||||| || || ||||| || || | || || ||||| Sbjct 1512 GACAGCATCGAGAATGTGAAACAGAAGATCCAAGACAAGGAGGGCATCCCACCTGATCAG 1453 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||||| || ||||| ||||| || || || |||| || || || | ||| |||||| Sbjct 1452 CAGCGTTTGATCTTTGCAGGCAAGCAGCTTGAGGACGGCCGTACCTTGGCCGACTACAAC 1393 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 || || ||||||||||| | ||||| || | ||| | || |||||| Sbjct 1392 ATCCAGAAAGAGTCCACCCTTCATTTGGTGCTCAGGCTTCGCGGAGGA 1345 >seq48723 Length=522 Score = 114 bits (126), Expect = 9e-21 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || ||||| | || ||||| || || || ||||| || || ||| | Sbjct 510 ATGCAGATCTTTGTAAAAACTTTGACTGGAAAGACCATTACCCTCGAGGTGGAATCCTCT 451 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||| || |||||| | || || || ||| || || || || | || || |||||| Sbjct 450 GACTCTATTGAAAACGTCAAGCAGAAGATTCAAGATAAGGAGGGCATTCCCCCTGATCAA 391 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| | || || || ||||| || || ||||| | |||||| | | || |||||| Sbjct 390 CAGCGCCTTATCTTCGCTGGCAAGCAGCTTGAAGATGGCCGCACTCTTGCAGACTACAAC 331 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 || ||||| || ||||| | ||||| || | || |||| |||||| Sbjct 330 ATCCAAAAGGAATCCACTCTTCATTTGGTGCTCAGACTGCGTGGAGGA 283 >seq21456 Length=1382 Score = 114 bits (126), Expect = 9e-21 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || || | || || || || |||||| | |||||||| ||| | Sbjct 477 ATGCAGATTTTTGTCAAGACATTGACTGGCAAGACCATCACTTTGGAAGTTGAATCCTCT 536 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||| | |||| | | || || || || ||||| || || | || || ||||| Sbjct 537 GACTCGATTGAGAACGTCAAGCAGAAGATCCAGGACAAGGAGGGCATTCCACCTGATCAG 596 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| | || |||||||| || || || || |||| ||||| | | ||||||||| Sbjct 597 CAGCGCCTCATCTTTGCCGGTAAGCAGCTCGAGGACGGCCGCACCCTGGCTGATTACAAC 656 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGATCA 23841 || ||||| || ||||| | ||||| || | || ||||| |||||| || Sbjct 657 ATCCAAAAGGAATCCACCCTTCATTTGGTGCTCAGATTGCGTGGAGGAGCA 707 Score = 100 bits (110), Expect = 2e-16 Identities = 143/199 (72%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAA-ACCCTCA-CGGGAAAAACGATCACTCTCGAAGTTGACTCCA 23668 |||||||| ||||||||| || |||| | || || || ||||| || || || || || Sbjct 19 ATGCAGATCTTCGTTAAAGACGCTCAACTGGCAAGACCATCACCCTTGAGGTCGAGTCTT 78 Query 23669 CGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 | |||| | || | | || ||||| || ||||| || || | || || || | Sbjct 79 CTGACAGCATCGAGAATGTCAAGCAAAAGATCCAGGACAAGGAGGGCATCCCACCCGACC 138 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 | |||||| | || |||||||||||||| || ||||||| ||||| | | || |||| Sbjct 139 AGCAGCGTCTCATCTTTGCCGGCAAACAGCTTGAAGACGGCCGCACCCTCGCTGACTACA 198 Query 23789 ACATACAAAAAGAGTCCAC 23807 | || ||||| |||||||| Sbjct 199 ATATCCAAAAGGAGTCCAC 217 >seq25074 Length=2226 Score = 113 bits (124), Expect = 3e-20 Identities = 145/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || ||||| || ||||| || || | || ||||| || | ||||| || || || ||| Sbjct 444 AACATGCAAATCTTCGTGAAGACTTTGACCGGAAAGACCGTTACTCTTGAGGTGGAATCC 385 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | ||| || |||||| | || || || ||| ||||| ||||| | || || ||| Sbjct 384 TCAGACTCTATTGAAAACGTCAAGCATAAGATTCAGGACAAGGAAGGCATCCCACCTGAT 325 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 ||||||||| | || || || ||||| || ||||| |||| ||||| | | || ||| Sbjct 324 CAACAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAGGACGGTCGCACCCTTGCAGACTAC 265 Query 23788 AACATACAAAAAGAGTCCAC 23807 ||||| ||||| |||||||| Sbjct 264 AACATCCAAAAGGAGTCCAC 245 >seq3581 Length=10373 Score = 113 bits (124), Expect = 3e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || |||||||| || || || ||||| | ||||| || | | Sbjct 5270 ATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACCTTGGAAGTGGAGAGCTCT 5329 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||| || |||| | | ||||| || || ||||| || || | || || ||||| Sbjct 5330 GACTCTATTGAGAATGTCAAACAGAAGATCCAGGACAAGGAGGGGATCCCCCCTGATCAG 5389 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || ||| | || ||||||||||| || || || |||| |||||| | | || |||||| Sbjct 5390 CAACGTCTGATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGCACTCTGGCTGACTACAAC 5449 Query 23791 ATACAAAAAGAGTCCAC 23807 || ||||| |||||||| Sbjct 5450 ATCCAAAAGGAGTCCAC 5466 Score = 107 bits (118), Expect = 1e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || ||| | || || || || ||||| || || || || ||| | Sbjct 4814 ATGCAGATTTTCGTCAAGACCTTGACTGGCAAGACTATCACCCTTGAGGTCGAGTCCTCT 4873 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||| | | || | | || || || ||| ||||| || || | || || || ||| Sbjct 4874 GACTCGATCGAGAACGTCAAGCAGAAGATTCAGGACAAGGAGGGCATTCCCCCTGACCAA 4933 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || ||||| || || || ||||| || || || |||| ||||| || | ||| |||||| Sbjct 4934 CAACGTTTGATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGCACCTTGGCCGACTACAAC 4993 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGT 23819 || ||||| ||||| || | ||||| || Sbjct 4994 ATCCAAAAGGAGTCTACCCTCCATTTGGT 5022 >seq49259 Length=868 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || ||||| | || ||||| || || || ||||| || || ||| | Sbjct 471 ATGCAGATCTTTGTAAAAACTTTGACTGGAAAGACCATTACCCTCGAGGTGGAATCCTCT 412 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||| || |||||| | || || || ||| || || || || | || || || || Sbjct 411 GACTCTATTGAAAACGTCAAGCAGAAGATTCAAGATAAGGAGGGCATTCCCCCTGACCAG 352 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || || || || || ||||| || || | ||||| || | |||||||||| Sbjct 351 CAGCGTCTGATCTTCGCTGGTAAGCAACTTGAGGATGGCCGCACCTTGGCCGATTACAAC 292 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGT 23819 || ||||| ||||| || | |||||||| Sbjct 291 ATCCAAAAGGAGTCTACCCTCCATTTAGT 263 >seq2942 Length=1743 Score = 109 bits (120), Expect = 4e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || || || ||||| || || || || ||||| | ||||| || | | Sbjct 1636 ATGCAAATCTTTGTGAAGACCCTGACTGGCAAGACTATCACCTTGGAAGTGGAGAGCTCT 1577 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||| | |||||| | || || || || ||||| |||||| | || ||||| || Sbjct 1576 GACTCGATTGAAAATGTGAAGCAGAAGATCCAGGACAAGGAAGGTATTCCTCCAGACCAG 1517 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || ||||| || ||||||||||| || || || || | ||||| | | || |||||| Sbjct 1516 CAACGTTTGATCTTTGCCGGCAAGCAGCTCGAGGATGGTCGCACCCTTGCAGACTACAAC 1457 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 || || || |||||||| | ||| | || | || |||||||||||| Sbjct 1456 ATCCAGAAGGAGTCCACCCTCCATCTGGTGCTCAGATTGCGAGGAGGA 1409 >seq4310 Length=8047 Score = 107 bits (118), Expect = 1e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || ||||| || || | || || || || || || |||||||| || ||| | Sbjct 264 ATGCAAATCTTCGTGAAGACTTTGACTGGCAAGACTATTACCCTCGAAGTGGAATCCTCT 205 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||| || |||||| | ||||| || || ||||| || || | || || |||||| Sbjct 204 GACTCTATTGAAAACGTCAAACAGAAGATCCAAGACAAGGAGGGCATTCCACCTGATCAA 145 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || || || || || || ||||| || | ||||| ||| || |||||| Sbjct 144 CAGCGTCTCATCTTCGCTGGTAAGCAGCTGGAGGATGGCCGCACGCTAGCTGACTACAAC 85 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGT 23819 || ||||| || ||||| | ||||| || Sbjct 84 ATCCAAAAGGAATCCACCCTCCATTTGGT 56 >seq23136 Length=1347 Score = 105 bits (116), Expect = 5e-18 Identities = 144/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 23607 TAAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTC 23666 || ||||||||||||||| || || | || || || || ||||| ||||| ||||| Sbjct 907 TACAATGCAGATTTTCGTCAAGACTTTGACTGGTAAGACCATCACCCTCGAGGTTGAGAG 966 Query 23667 CACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 | |||||| | || | |||| || || || ||||| || || | || || || Sbjct 967 CTCGGACAGCATCGAGAATGTAAAGCAGAAGATCCAGGACAAGGAGGGCATTCCTCCCGA 1026 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 ||| |||||||| || || || ||||| || || || |||| ||||| || | ||| || Sbjct 1027 TCAGCAGCGTTTGATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGCACCTTGGCCGACTA 1086 Query 23787 CAACATACAAAAAGAGTCCAC 23807 |||||| || || || ||||| Sbjct 1087 CAACATCCAGAAGGAATCCAC 1107 >seq20128 Length=1734 Score = 105 bits (116), Expect = 5e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| || ||||| ||||| | || ||||| ||||| ||||| || || || ||| | Sbjct 860 AATGCAAATCTTCGTGAAAACTTTGACTGGAAAGACGATTACTCTGGAGGTGGAATCCTC 919 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||| || |||||| | || ||||| ||| ||||| || || | || || ||||| Sbjct 920 AGACTCTATTGAAAACGTCAAGCAAAAGATTCAGGACAAGGAGGGCATTCCCCCTGATCA 979 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || ||| | || || || || || || ||||| |||| || || | | ||||||||| Sbjct 980 GCAACGTCTCATCTTCGCTGGTAAGCAGCTGGAGGACGGCCGTACCCTCGCCGATTACAA 1039 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || || || || Sbjct 1040 CATCCAGAAGGAATCTAC 1057 >seq50001 Length=390 Score = 98.7 bits (108), Expect = 7e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || || | || || || || ||||| |||||||| || || | Sbjct 89 ATGCAGATCTTTGTGAAGACATTGACCGGCAAGACCATCACCCTCGAAGTGGAGTCATCT 148 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || | |||| | |||| || || ||| ||||| || || | || || ||||| Sbjct 149 GATTCGATTGAGAATGTAAAGCAGAAGATTCAGGACAAGGAGGGCATCCCTCCCGATCAG 208 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||||| || ||||||||||| || || || || | ||||||| | | || |||||| Sbjct 209 CAGCGTTTGATCTTTGCCGGCAAGCAGCTCGAGGATGGACGCACTCTGGCTGACTACAAC 268 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || || || || Sbjct 269 ATTCAGAAGGAATCTAC 285 >seq23330 Length=2255 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || || ||||| || || || |||||| | ||||| || | | Sbjct 1970 ATGCAGATCTTTGTGAAGACGCTCACTGGCAAGACTATCACTTTGGAAGTGGAGAGCTCT 1911 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||| | | || | | || || || || ||||| || || | || || |||||| Sbjct 1910 GACTCAATCGAGAACGTCAAGCAGAAGATCCAGGACAAGGAGGGCATTCCCCCTGATCAA 1851 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| | || ||||| ||||| ||||| ||||| | ||||| | | || |||||| Sbjct 1850 CAGCGCCTCATCTTTGCAGGCAAGCAACTCGAAGATGGTCGCACCCTGGCAGACTACAAC 1791 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 || || || |||||||| | ||| | || | || ||||| || ||| Sbjct 1790 ATCCAGAAGGAGTCCACTCTCCATCTGGTGCTTAGATTGCGTGGTGGA 1743 >seq6315 Length=1928 Score = 95.1 bits (104), Expect = 8e-15 Identities = 141/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || ||||| || ||||| || || | || ||||| || || || |||||||| || ||| Sbjct 1599 AACATGCAAATCTTCGTGAAGACTTTGACTGGAAAGACCATTACCCTCGAAGTGGAATCC 1658 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | ||| | |||||| | || ||||| || ||||| || || | || || ||| Sbjct 1659 TCTGACTCGATTGAAAACGTCAAGCAAAAGATCCAAGACAAGGAGGGCATTCCCCCTGAT 1718 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 |||||||| | || || || ||||| || || || || | ||||| ||| || ||| Sbjct 1719 CAACAGCGCCTCATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTAGCTGACTAC 1778 Query 23788 AACATACAAAAAGAGTCCAC 23807 ||||| || || || ||||| Sbjct 1779 AACATCCAGAAGGAATCCAC 1798 >seq17585 Length=2016 Score = 87.8 bits (96), Expect = 1e-12 Identities = 133/188 (71%), Gaps = 1/188 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || ||||| | || ||||| || || || || || || || ||| | Sbjct 1833 ATGCAGATCTTTGTAAAAACTTTGACAGGAAAGACCATTACCCTTGAGGTCGAGTCCTCT 1774 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || | | || | |||| || || || ||||| || || | || || ||||| Sbjct 1773 GATAGCATCGAGAATGTAAAGCAGAAGATCCAGGACAAGGAGGGCATTCCTCCCGATCAG 1714 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACT-TTAGGCGATTACAA 23789 |||||||| || ||||||||||| || || || |||| |||||| | | ||| ||||| Sbjct 1713 CAGCGTTTGATCTTTGCCGGCAAGCAGCTTGAGGACGGCCGCACTCTGCGTCGACTACAA 1654 Query 23790 CATACAAA 23797 ||| |||| Sbjct 1653 CATCCAAA 1646 >seq37486 Length=869 Score = 86.0 bits (94), Expect = 4e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || || | || || || || |||||||| ||||| || || | Sbjct 327 ATGCAGATTTTCGTCAAGACATTGACTGGCAAGACTATCACTCTGGAAGTCGAATCTTCT 268 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || | | || | | || || || || ||||| || || | || || ||||| Sbjct 267 GATAGCATCGAGAACGTCAAGCAGAAGATCCAGGACAAGGAGGGCATTCCCCCTGATCAG 208 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || || || || ||||| |||||||| || ||||| | ||||| | | || |||||| Sbjct 207 CAACGCTTGATTTTTGCAGGCAAACAGCTTGAAGATGGCCGCACCCTTGCAGACTACAAC 148 Query 23791 ATACAAAAAGAGTCCAC 23807 || ||||| || || || Sbjct 147 ATCCAAAAGGAATCTAC 131 >seq21227 Length=1716 Score = 86.0 bits (94), Expect = 4e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| || ||||| || || | || ||||| || || || ||||| || || ||| | Sbjct 1091 AATGCAAATCTTCGTGAAGACTTTGACTGGAAAGACCATTACCCTCGAGGTGGAATCCTC 1150 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||| | |||| | | || ||||| || ||||| || || | || |||||||| Sbjct 1151 TGACTCGATTGAGAACGTCAAGCAAAAGATCCAAGACAAGGAGGGCATTCCCCCAGATCA 1210 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || || || || || || || || || | ||||| | | || ||||| Sbjct 1211 ACAGCGCCTTATTTTCGCTGGTAAGCAGCTCGAGGATGGCCGCACCCTGGCTGACTACAA 1270 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGT 23819 ||| ||||| || || || | ||||| || Sbjct 1271 CATCCAAAAGGAATCTACTCTCCATTTGGT 1300 >seq43176 Length=399 Score = 82.4 bits (90), Expect = 5e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || ||| | || || || || ||||| || || || || ||| | Sbjct 158 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATCACCCTTGAGGTGGAGTCCTCT 99 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 |||| | |||| | || || || || ||||| || || | || ||||| ||| Sbjct 98 GACAGCATCGAAAACGTGAAGCAGAAGATCCAAGACAAGGAGGGCATCCCACCAGACCAA 39 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGA 23765 |||||||| || ||||||||||| || || || || Sbjct 38 CAGCGTTTGATCTTTGCCGGCAAGCAGCTCGAGGA 4 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337772341977752