Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20culbertsoni_20[genbank_20GCA_5F000826265.1_202015-01- 06] 72,411 sequences; 55,543,795 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq71924 291 8e-74 seq71072 172 6e-38 seq72303 158 1e-33 seq72113 154 2e-32 seq68586 152 5e-32 seq68691 149 6e-31 seq72197 145 8e-30 seq71761 140 3e-28 seq71838 132 5e-26 seq71540 131 2e-25 seq71822 129 6e-25 seq21823 127 2e-24 seq44037 123 3e-23 seq2576 113 5e-20 seq6784 111 2e-19 seq69796 105 7e-18 seq69093 105 7e-18 seq66998 105 7e-18 seq52812 96.9 4e-15 seq68585 95.1 1e-14 seq71843 91.5 2e-13 seq64353 87.8 2e-12 seq71579 86.0 6e-12 >seq71924 Length=31871 Score = 291 bits (322), Expect = 8e-74 Identities = 560/813 (69%), Gaps = 17/813 (2%) Strand=Plus/Minus Query 116603 CGGTTCGTGATTTTCCCCATACAATACCCGGACATGTGGCGCATGTACAAAAAGGCCGAG 116662 || |||||| | |||||||| | ||| | ||| ||| | ||||| ||||| ||| Sbjct 9251 CGTTTCGTGCTATTCCCCATTAATCACCAGCGCATCTGGGAGTTCTACAAGAAGGCTGAG 9192 Query 116663 GCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGACTGGGAG-CG 116721 || || |||||||| | ||| || || || || || ||| || |||||| || Sbjct 9191 GCTTCCTTCTGGACTGCCGAAGAAGTCGATCTAGGCAGCGACTTGAATCACTGGGCCTCG 9132 Query 116722 CTTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCCGCCAGCGA 116781 || | | ||||| || ||||| ||||||||||||||||| ||||| || || || Sbjct 9131 CTC-ACTAAGGACGAGAAGCACTTCATTAAGCACGTGCTGGCCTTCTTCGCGGCTAGTGA 9073 Query 116782 CGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGGCCGAGGC 116841 ||| || || |||||||| | | || ||| |||| ||||| || ||||||| Sbjct 9072 CGGTATTGTTGCTGAGAATCTCGCTGTTCGCTTCATGAAGGAAGTGCAAGTTCCCGAGGC 9013 Query 116842 GCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAATGTATTCGAC 116901 ||| |||||||| || || || |||||||| || ||| | |||||||| |||||||| Sbjct 9012 GCGTTGCTTCTATGGATTCCAAATCGCCATTGAAAACATTCACTCGGAGATGTATTCCCT 8953 Query 116902 CCTCATCGACACGTACGT---GCGCTCTTCGGAGGAGAAGCTCCGTTTGTTGAACGCCAT 116958 || |||||||| ||||| | | || ||| || | | || | || |||||| Sbjct 8952 TCTTATCGACACCTACGTCAAGGACCCTATCGAGAAGGATCGCC---TCTTCCGCGCCAT 8896 Query 116959 CGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATC-GCCGGCA 117017 ||| || |||| | |||||| |||||||||||||||| | |||||| || | | Sbjct 8895 CGAAACTGTGCCTTCAGTCAAAAAGAAGGCCGAGTGGGCTATCAAGTGGATCGGCAAGGA 8836 Query 117018 GAG--AGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTT 117075 | | ||| |||||| ||||| || | | || || ||||| |||||| | ||||| Sbjct 8835 GGGCCAGGAGACCTTCGCTGAGCGTCTCATTGGTTTTGCTGCCGTAGAGGGCATTTTCTT 8776 Query 117076 TTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGAC 117135 |||||||| ||| | |||| |||||||| ||||| || |||||||||||||| || | Sbjct 8775 CTCGGGCAGCTTCTGCTCCATCTTTTGGCTGAAGAAGCGAGGCCTCATGCCCGGACTCTC 8716 Query 117136 TTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCT 117195 || ||||||||||||| | | ||||||||||| || ||||||||||| ||| | || Sbjct 8715 CTTTTCCAACGAGCTCATCAGCCGTGACGAGGGTCTTCACTGCGACTTTGCTTGTCTCCT 8656 Query 117196 GTTCAAGCAT-TTGGTGCAGCGA--CCGAGCGCGGCGCGCGTCAGGGAGATCGTCACCGA 117252 | ||||| | || || | | || || || | | | | | |||| | ||| Sbjct 8655 -CTATAGCATGCTCGT-CAACAAACCCTCGCCCGAGGTTCCT-AAGACGATCATTCTCGA 8599 Query 117253 CGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGCTGCCGGTGCGTCTGCTGGGACT 117312 || |||| || ||| || ||| ||||||| | || || ||| ||| | || | Sbjct 8598 GGCTGTCGAGATAGAGAAGGAGTTCGTCACCGAGTCTCTCCCCGTGGCTCTCATCGGCAT 8539 Query 117313 CAATTGCGAAACGATGTCGCAATACATCGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCT 117372 || ||| |||| || |||||||| |||||||||||| | || || | | || Sbjct 8538 GAACGCCGAGCTCATGTGCCAGTACATCGAATTCGTCGCCGACCGTCTCCTCGTGGCTCT 8479 Query 117373 GGTCGGCGCCAAGCACTACAACACGCCCAACCC 117405 | | | | ||||| | | ||| | ||||||| Sbjct 8478 TGGCTGTGAGAAGCATTTCCACAAGACCAACCC 8446 >seq71072 Length=54149 Score = 172 bits (190), Expect = 6e-38 Identities = 177/229 (77%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || |||||||| ||||||||| | || || || ||| | Sbjct 14276 ATGCAGATCTTCGTCAAGACTCTTACGGGCAAGACCATCACCCTTGAGGTGGAGTCCAGC 14217 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | ||| |||| || | ||||| ||||||||||| | ||||| Sbjct 14216 GACACCATTGAGAACG-TAAAGCAAAAGATCCAGGACAAGGAGGGCATCCCGCCCGACCA 14158 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||||||||| ||||| || |||| ||||||||| ||||||||| Sbjct 14157 GCAGCGCCTCATCTTCGCGGGCAAGCAGCTCGAGGACGGCCGCACCCTCGCCGACTACAA 14098 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||||||| | ||||| || || ||| | || || | || ||| Sbjct 14097 CATCCAGAAGGAGTCGACGCTCCACCTCGTGCTTCGTCTGCGCGGTGGC 14049 Score = 145 bits (160), Expect = 8e-30 Identities = 171/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || ||||| || || ||| |||| || || ||| | Sbjct 14048 ATGCAGATCTTCGTCAAGACTCTTACCGGCAAGACTATTACCCTCGAGGTGGAGTCCAGC 13989 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | ||| | || || | ||||| |||||||| ||| | ||||| Sbjct 13988 GACACCATTGAGAACG-TGAAGCAGAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCA 13930 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| ||||| ||||| || |||| ||||||||| ||||||||| Sbjct 13929 GCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACCCTCGCCGACTACAA 13870 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||| || |||||| | || || || || ||| | ||| || | || ||| Sbjct 13869 CATTCAAAAGGAGTCGACTCTCCACCTTGTGCTTCGCCTGCGCGGTGGC 13821 >seq72303 Length=46806 Score = 158 bits (174), Expect = 1e-33 Identities = 175/231 (76%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || ||||| || || || |||||||| ||||||||| |||| || ||| || Sbjct 30320 AACATGCAGATCTTCGTCAAGACCCTTACGGGCAAGACCATCACCCTCGAGGTGGAATCC 30379 Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | ||||| | | | |||| | ||| | || || | ||||| |||||||| ||| | || Sbjct 30380 AGCGACACCATTGAGAACG-TGAAGCAGAAGATCCAGGACAAGGAGGGCATTCCCCCCGA 30438 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| || ||||||| ||| || || ||||| || |||| ||||| || |||||| Sbjct 30439 CCAGCAGCGCCTCATCTTCGCCGGTAAGCAGCTTGAGGACGGTCGCACTCTGGCCGACTA 30498 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||||||| | || || || || ||| | ||| || | || || Sbjct 30499 CAACATCCAGAAGGAGTCAACTCTCCACCTCGTGCTCCGCCTGCGTGGTGG 30549 >seq72113 Length=77669 Score = 154 bits (170), Expect = 2e-32 Identities = 166/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || |||||||| ||||| || |||| || || ||| | Sbjct 39567 ATGCAGATCTTCGTCAAGACCCTTACGGGCAAGACCATTACTCTCGAGGTGGAGTCCAGC 39626 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | ||| |||| || | ||||| |||||||||||| | ||||| Sbjct 39627 GACACGATCGAGAACG-TGAAGCAAAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCA 39685 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| ||||| ||||| || |||| ||||||||| |||||||| Sbjct 39686 GCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCGCTGACTACAA 39745 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGC 40905 ||||||||||||| | || || || || ||| | ||| Sbjct 39746 CATCCAGAAGGAGTCTACCCTCCACCTCGTGCTCCGC 39782 Score = 140 bits (154), Expect = 3e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || |||||||| ||||| || |||| || || ||| | Sbjct 39795 ATGCAGATCTTCGTCAAGACTCTAACGGGCAAGACCATTACTCTCGAGGTGGAGTCCAGC 39854 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | ||| | || || | ||||| |||||||| || | ||||| Sbjct 39855 GACACGATCGAGAACG-TGAAGCAGAAGATCCAGGACAAGGAGGGCATTCCTCCCGACCA 39913 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| ||||| ||||| || |||| ||||||||| |||||||| Sbjct 39914 GCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACCCTCGCTGACTACAA 39973 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||| |||||| | || || || || || | ||| || | |||||| Sbjct 39974 CATCCAAAAGGAGTCTACCCTCCACCTCGTCCTCCGCCTGCGCGGCGGC 40022 Score = 123 bits (136), Expect = 3e-23 Identities = 159/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || ||||| ||||| || |||| || ||| ||| | Sbjct 39339 ATGCAGATCTTCGTCAAGACTTTGACTGGCAAGACCATTACTCTCGAGGTGGAATCCAGC 39398 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | ||| | || || | ||||| |||||||| ||| | ||||| Sbjct 39399 GACACGATCGAGAACG-TGAAGCAGAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCA 39457 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || || | ||| || || ||||| || |||| ||||| || ||||||||| Sbjct 39458 GCAGCGCCTTATATTCGCCGGTAAGCAGCTTGAGGACGGTCGCACTCTGGCCGACTACAA 39517 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGC 40905 ||||||||||||| | || || || || ||| | ||| Sbjct 39518 CATCCAGAAGGAGTCAACTCTCCACCTCGTGCTCCGC 39554 >seq68586 Length=2644 Score = 152 bits (168), Expect = 5e-32 Identities = 171/226 (76%), Gaps = 2/226 (1%) Strand=Plus/Plus Query 40692 GCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGA 40751 ||| || ||||| || || || |||||||| ||||||||| | || || || ||| ||| Sbjct 1 GCAGATCTTCGTCAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTGGAGTCCAGCGA 60 Query 40752 CAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGC 40810 || | | |||| | ||| | || || | ||||| ||||||||||| | ||||||| Sbjct 61 CACGATCGAGAACG-TGAAGCAGAAGATCCAAGACAAGGAGGGCATCCCGCCCGACCAGC 119 Query 40811 AACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACA 40870 | || ||||||| ||||||||| ||||| || |||| |||||||| |||||||||| Sbjct 120 AGCGCCTCATCTTCGCGGGCAAGCAGCTCGAGGACGGCCGCACCCTTGCTGACTACAACA 179 Query 40871 TCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||| | ||||| || || ||| | ||| || | || || Sbjct 180 TCCAGAAGGAGTCGACGCTCCACCTCGTGCTCCGCCTGCGTGGTGG 225 Score = 147 bits (162), Expect = 2e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || |||||||| ||||||||| | || || || ||| | Sbjct 227 ATGCAGATCTTCGTCAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTGGAGTCCAGC 286 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | ||| | || || | ||||| ||||||||||| | ||||| Sbjct 287 GACACCATTGAGAACG-TGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCGCCCGACCA 345 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| || ||||| || || || |||| ||||||||| |||||||| Sbjct 346 GCAGCGCCTCATCTTTGCCGGCAAGCAACTCGAGGACGGCCGCACCCTCGCTGACTACAA 405 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||||| | || || || || ||| | ||| || | || || Sbjct 406 CATCCAGAAGGAGTCTACCCTCCACCTTGTGCTACGCCTGCGTGGTGG 453 Score = 129 bits (142), Expect = 6e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| |||||| | || ||||| ||||| || |||| || || ||| | Sbjct 455 ATGCAGATCTTCGTCAAAACGTTGACTGGCAAGACCATTACTCTCGAGGTGGAGTCCAGC 514 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | ||| | || || | ||||| |||||||| ||| | ||||| Sbjct 515 GACACGATCGAGAACG-TGAAGCAGAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCA 573 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || || | ||| ||||| ||||| || |||| ||||||||| |||||||| Sbjct 574 GCAGCGTCTTATTTTCGCTGGCAAGCAGCTCGAGGACGGTCGCACCCTCGCTGACTACAA 633 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||| |||||| | || || || || || | ||| || | || || Sbjct 634 CATCCAAAAGGAGTCTACCCTCCACCTCGTCCTCCGCCTGCGCGGTGG 681 >seq68691 Length=2609 Score = 149 bits (164), Expect = 6e-31 Identities = 161/211 (76%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || |||||||| ||||| || |||| || || ||| | Sbjct 191 ATGCAGATCTTCGTCAAGACCCTTACGGGCAAGACCATTACTCTCGAGGTGGAGTCCAGC 250 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | ||| |||| || | ||||| ||||||||||| | ||||| Sbjct 251 GACACGATCGAGAACG-TGAAGCAAAAGATCCAGGACAAGGAGGGCATCCCGCCCGACCA 309 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| || ||||| |||||||| |||| ||||||||| ||||||||| Sbjct 310 GCAGCGCCTCATCTTTGCCGGCAAGCAGCTGGAGGACGGTCGCACCCTCGCCGACTACAA 369 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 |||||| |||||| | || || || || ||| Sbjct 370 CATCCAAAAGGAGTCGACTCTCCACCTCGTG 400 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| ||||| || || ||| |||| || || ||| | Sbjct 419 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACTATTACCCTCGAGGTGGAGTCCAGC 478 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | ||| |||| || | ||||| |||||||| ||| | ||||| Sbjct 479 GACACCATTGAGAACG-TGAAGCAAAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCA 537 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| || ||||| || || || |||| ||||| ||| |||||||| Sbjct 538 GCAGCGCCTCATCTTTGCCGGCAAGCAACTCGAGGACGGCCGCACGCTCGCTGACTACAA 597 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||| |||||| | || || || || || | ||| || | ||||| Sbjct 598 CATCCAAAAGGAGTCTACCCTCCACCTCGTCCTCCGCCTGCGCGGCGG 645 Score = 107 bits (118), Expect = 2e-18 Identities = 132/178 (74%), Gaps = 2/178 (1%) Strand=Plus/Plus Query 40729 ACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAA 40787 ||| |||| || || ||| ||||| | | | |||| | ||| |||| || | ||||| Sbjct 2 ACCCTCGAGGTGGAGTCCAGCGACACCATTGAGAACG-TGAAGCAAAAGATCCAGGACAA 60 Query 40788 AGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGA 40847 || ||||| ||| | |||||||| || || |||| ||| || || ||||| || |||| Sbjct 61 GGAAGGCATTCCCCCCGACCAGCAGCGCCTTATCTTCGCCGGTAAGCAGCTTGAGGACGG 120 Query 40848 GCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGC 40905 ||||| || |||||||||||||||||||||| | || || || || ||| | ||| Sbjct 121 TCGCACTCTGGCCGACTACAACATCCAGAAGGAGTCAACTCTCCACCTCGTGCTCCGC 178 >seq72197 Length=52184 Score = 145 bits (160), Expect = 8e-30 Identities = 172/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| ||||| || || || || || ||||| ||||| ||| |||| || || || Sbjct 20648 AACATGCAGATATTTGTTAAGACCCTGACCGGCAAGACCATTACCCTCGAGGTGGAGTCC 20707 Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | ||||| | | |||| | ||| | || || | ||||| |||||||||||| | || Sbjct 20708 AGCGACACGATCGAGAACG-TGAAGCARAAGATCCAGGACAAGGAGGGCATCCCCCCCGA 20766 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| || ||||| | ||| ||||| ||||| || |||| |||||||| ||||| Sbjct 20767 CCAGCAGCGCCTCATTTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTTGCTGACTA 20826 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||||||| | || || || || ||| | ||| || | || || Sbjct 20827 CAACATCCAGAAGGAGTCGACTCTCCACCTCGTGCTCCGCCTGCGTGGTGG 20877 >seq71761 Length=19511 Score = 140 bits (154), Expect = 3e-28 Identities = 171/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || ||||| || || ||||| ||||| ||||| || |||| ||||| || Sbjct 8409 AACATGCAGATTTTCGTCAAGACCCTCACTGGCAAGACCATTACTCTCGAGGTCGAGTCC 8350 Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | ||||| | | |||| | ||| | || || | ||||| || ||||| ||| | || Sbjct 8349 AGCGACACGATCGAGAACG-TGAAGCAGAAGATCCAGGACAAGGAAGGCATTCCCCCCGA 8291 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| || || |||| ||| || || ||||| || |||| ||||| || |||||| Sbjct 8290 CCAGCAGCGCCTTATCTTCGCCGGTAAGCAGCTTGAGGACGGTCGCACTCTGGCCGACTA 8231 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||||||| | || || ||||| ||| | ||| || | || || Sbjct 8230 CAACATCCAGAAGGAGTCGACTCTCCATCTCGTGCTCCGCCTGCGTGGTGG 8180 Score = 136 bits (150), Expect = 4e-27 Identities = 171/232 (74%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| |||||| | || ||||| ||||| || |||| ||||| ||| | Sbjct 8178 ATGCAGATCTTCGTCAAAACGTTGACTGGCAAGACCATTACTCTCGAGGTCGAGTCCAGC 8119 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | ||| | || || | ||||| || ||||||||| | ||||| Sbjct 8118 GACACGATCGAGAACG-TGAAGCAGAAGATCCAGGACAAGGAAGGCATCCCCCCCGACCA 8060 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || || | ||| ||||| ||||| || |||| ||||| || ||||||||| Sbjct 8059 GCAGCGTCTTATTTTCGCCGGCAAGCAGCTTGAGGACGGTCGCACTCTGGCCGACTACAA 8000 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCGGC 40920 ||| || ||||| | || || || || |||||||| | ||||| || ||| Sbjct 7999 CATTCAAAAGGAATCTACTCTCCACCTTGTGTTGCGACTCAGGGGTGGAGGC 7948 >seq71838 Length=148749 Score = 132 bits (146), Expect = 5e-26 Identities = 159/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || |||||||| || |||||| | || || || | || Sbjct 73042 ATGCAGATCTTCGTCAAGACCCTTACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTCC 72983 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | ||| | ||| | || |||| ||||| ||||||||||| | || ||| Sbjct 72982 GACACCATCGAAAATGTTAAGCAGAAGATTCAGGACAAGGAGGGCATCCCTCCTGATCAG 72923 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||| ||||| ||||| || || | | |||||| ||||||||| Sbjct 72922 CAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCAGGACCCTCGCGGACTACAAC 72863 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGC 40905 |||||||||||| |||| || || || ||| | ||| Sbjct 72862 ATCCAGAAGGAGTCCACCCTCCACCTTGTGCTCCGC 72827 >seq71540 Length=49709 Score = 131 bits (144), Expect = 2e-25 Identities = 159/214 (74%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || ||||| ||||| || ||||| ||| |||| || || | | Sbjct 42733 ATGCAAATCTTTGTTAAGACGCTGACGGGGAAGACCATTACCCTCGAGGTGGAGTCTTCA 42792 Query 40750 GACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | ||||| | ||| |||| || | ||||| ||||||||||| | ||||| Sbjct 42793 GACACCATAGAAAACG-TAAAGCAAAAGATACAAGACAAGGAGGGCATCCCGCCTGACCA 42851 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| ||||| || | || ||||| ||||| || |||| |||||||| ||||||||| Sbjct 42852 GCAGCGACTTATTTTTGCTGGCAAGCAGCTTGAGGACGGCCGCACCCTGGCCGACTACAA 42911 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 || || |||||| | || || ||| | ||| || Sbjct 42912 TATTCAAAAGGAGTCTACCCTCCATTTGGTGCTG 42945 >seq71822 Length=82145 Score = 129 bits (142), Expect = 6e-25 Identities = 158/213 (74%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||| |||||||| ||||| ||||| ||||| |||||||| |||| |||| |||| | Sbjct 74434 ATGCGGATATTCGTCAAAACCCTCACCGGCAAGACCATCACTCTCGAGGTCGGGGCCAGC 74493 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAG-AGGGCATCCCCGCGGACCA 40808 |||| || ||| || | | | | || ||| ||| ||||||| || | || || Sbjct 74494 GACACGGT-CAACAGCGTGAAGCAGCAGGTCCAGACCAAGGAGGGCATTCCTCCCGAGCA 74552 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| ||| ||||| ||||| || |||| |||| ||| ||||||||| Sbjct 74553 GCAGCGCCTTATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCAGCCTGGCCGACTACAA 74612 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTT 40901 ||||||||||||| | || || ||||| || || Sbjct 74613 CATCCAGAAGGAGTCGACTCTCCATCTCGTCTT 74645 >seq21823 Length=199 Score = 127 bits (140), Expect = 2e-24 Identities = 147/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 40692 GCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGA 40751 ||| || ||||| || || | || ||||| ||||| || |||| || || ||| ||| Sbjct 199 GCAGATCTTCGTCAAGACTTTGACTGGCAAGACCATTACTCTCGAGGTGGAGTCCAGCGA 140 Query 40752 CAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCA 40811 || | | | || ||| | || || | ||||| |||||||||||| | |||||||| Sbjct 139 CACGATCGAGAACCTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAGCA 80 Query 40812 ACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACAT 40871 || || || | ||| ||||| ||||| || |||| ||||||||| |||||||||||| Sbjct 79 GCGCCTTATTTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCGCCGACTACAACAT 20 Query 40872 CCAGAAGGAGGCCACGCT 40889 |||||||||| | || || Sbjct 19 CCAGAAGGAGTCGACTCT 2 >seq44037 Length=160 Score = 123 bits (136), Expect = 3e-23 Identities = 110/138 (80%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 40768 AAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCG 40827 ||| |||| || | ||||| |||||||||||| | |||||||| || ||||||| ||| Sbjct 5 AAGCAAAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGCCTCATCTTCGCT 64 Query 40828 GGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACG 40887 ||||| ||||| || |||| ||||||||| ||||||||||||||||||||| | || Sbjct 65 GGCAAGCAGCTCGAGGACGGCCGCACCCTCGCTGACTACAACATCCAGAAGGAGTCAACT 124 Query 40888 CTGCATCTAGTGTTGCGC 40905 || || || ||| | ||| Sbjct 125 CTCCACCTCGTGCTCCGC 142 >seq2576 Length=127 Score = 113 bits (124), Expect = 5e-20 Identities = 95/117 (81%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| ||||| ||||| | |||||||| || ||||||| ||||||||| |||||||| Sbjct 8 GACAAGGAGGGTATCCCTCCCGACCAGCAGCGCCTCATCTTCGCGGGCAAGCAGCTGGAG 67 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 |||| ||||||||| |||||||||||| || |||||| | || || || || ||| Sbjct 68 GACGGTCGCACCCTCGCCGACTACAACATTCAAAAGGAGTCGACTCTCCACCTTGTG 124 >seq6784 Length=120 Score = 111 bits (122), Expect = 2e-19 Identities = 84/99 (85%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| |||||||| ||| | |||||||| || ||||||| ||| ||||| ||||| || Sbjct 101 GACAAGGAGGGCATTCCCCCCGACCAGCAGCGCCTCATCTTCGCTGGCAAGCAGCTCGAG 42 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAG 40881 |||| ||||||||| |||||||||||||||||||||| Sbjct 41 GACGGCCGCACCCTCGCCGACTACAACATCCAGAAGGAG 3 >seq69796 Length=9482 Score = 105 bits (116), Expect = 7e-18 Identities = 106/138 (77%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 40784 ACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACG 40843 |||| ||||| |||||| | |||||||| || ||||| | ||| ||||| ||||| || | Sbjct 2207 ACAAGGAGGGTATCCCCCCCGACCAGCAGCGTCTCATTTTCGCTGGCAAGCAGCTTGAGG 2266 Query 40844 ACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGC 40903 | | ||||||||| |||||||||||| ||| ||| |||| || || || || |||| Sbjct 2267 ATGGACGCACCCTCGCCGACTACAACATTCAGTGCGAGTCCACCCTTCACCTGGTTTTGC 2326 Query 40904 GCTTGAGGGGCGGCGGCT 40921 | || |||| || |||| Sbjct 2327 GTCTGCGGGGTGGGGGCT 2344 >seq69093 Length=6815 Score = 105 bits (116), Expect = 7e-18 Identities = 106/138 (77%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 40784 ACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACG 40843 |||| ||||| |||||| | |||||||| || ||||| | ||| ||||| ||||| || | Sbjct 4609 ACAAGGAGGGTATCCCCCCCGACCAGCAGCGTCTCATTTTCGCTGGCAAGCAGCTTGAGG 4550 Query 40844 ACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGC 40903 | | ||||||||| |||||||||||| ||| ||| |||| || || || || |||| Sbjct 4549 ATGGACGCACCCTCGCCGACTACAACATTCAGTGCGAGTCCACCCTTCACCTGGTTTTGC 4490 Query 40904 GCTTGAGGGGCGGCGGCT 40921 | || |||| || |||| Sbjct 4489 GTCTGCGGGGTGGGGGCT 4472 >seq66998 Length=5412 Score = 105 bits (116), Expect = 7e-18 Identities = 106/138 (77%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 40784 ACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACG 40843 |||| ||||| |||||| | |||||||| || ||||| | ||| ||||| ||||| || | Sbjct 2456 ACAAGGAGGGTATCCCCCCCGACCAGCAGCGTCTCATTTTCGCTGGCAAGCAGCTTGAGG 2515 Query 40844 ACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGC 40903 | | ||||||||| |||||||||||| ||| ||| |||| || || || || |||| Sbjct 2516 ATGGACGCACCCTCGCCGACTACAACATTCAGTGCGAGTCCACCCTTCACCTGGTTTTGC 2575 Query 40904 GCTTGAGGGGCGGCGGCT 40921 | || |||| || |||| Sbjct 2576 GTCTGCGGGGTGGGGGCT 2593 >seq52812 Length=109 Score = 96.9 bits (106), Expect = 4e-15 Identities = 85/106 (80%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 40794 CATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCAC 40853 ||||||| | |||||||| || ||||| | ||| ||||| ||||| || |||| ||||| Sbjct 109 CATCCCCCCCGACCAGCAGCGCCTCATTTTCGCCGGCAAGCAGCTCGAGGACGGCCGCAC 50 Query 40854 CCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 |||| ||||||||||||||||||||| | || || || || ||| Sbjct 49 CCTCGCTGACTACAACATCCAGAAGGAGTCGACTCTCCACCTCGTG 4 >seq68585 Length=3828 Score = 95.1 bits (104), Expect = 1e-14 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 40792 GGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGC 40851 ||||| || |||| ||| || ||||||| || ||||| |||||||| |||| ||| Sbjct 887 GGCATTCCGCCGGATCAGATTCGCCTCATCTTCGGCGGCAAGCAGCTGGAGGACGGCCGC 828 Query 40852 ACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTG 40908 || || | ||||| | ||||| ||||||| ||||||||||||| ||| ||||| || Sbjct 827 ACGCTGAGCGACTTCGACATCAGGAAGGAGTCCACGCTGCATCTCGTGCTGCGCCTG 771 >seq71843 Length=18661 Score = 91.5 bits (100), Expect = 2e-13 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 40792 GGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGC 40851 || ||||| | |||||||| || || |||| ||| ||||| ||||| || || | ||| Sbjct 3324 GGAATCCCTCCTGACCAGCAGCGTCTTATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGC 3383 Query 40852 ACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGG 40911 || || ||||||||||||||||||||| |||| || || || ||| | ||| | ||| Sbjct 3384 ACTCTTGCTGACTACAACATCCAGAAGGAGTCCACTCTCCACCTGGTGCTCCGCCTTAGG 3443 Query 40912 GGCGG 40916 || || Sbjct 3444 GGAGG 3448 >seq64353 Length=109 Score = 87.8 bits (96), Expect = 2e-12 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 40804 GACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGAC 40863 |||||||| || || |||| ||| || || |||||||| |||| ||||||||| ||| Sbjct 99 GACCAGCAGCGCCTTATCTTCGCCGGAAAGCAGCTGGAGGACGGCCGCACCCTCGCTGAC 40 Query 40864 TACAACATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 |||||||||||||||||| | || || || || ||| Sbjct 39 TACAACATCCAGAAGGAGTCGACTCTCCACCTCGTG 4 >seq71579 Length=52637 Score = 86.0 bits (94), Expect = 6e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 |||| ||||||||||| | |||||||| || |||||| ||| ||||| ||||| || Sbjct 27621 GACATGGAGGGCATCCCGCCCGACCAGCAGCGGATCATCTTCGCCGGCAAGCAGCTCGAG 27680 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 |||| ||||| || ||||||||| |||||| ||| |||| || || || || || Sbjct 27681 GACGGCCGCACTCTGGGCGACTACAATATCCAGCCCGAGTCCACCCTCCACCTCGTCCTG 27740 Query 40903 CG 40904 || Sbjct 27741 CG 27742 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 514752855781360