Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20culbertsoni_20[genbank_20GCA_5F000826265.1_202015-01- 06] 72,411 sequences; 55,543,795 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq71924 282 4e-71 seq71032 163 3e-35 seq71761 125 6e-24 seq71072 118 9e-22 seq72303 116 3e-21 seq72113 113 4e-20 seq71540 111 1e-19 seq68691 111 1e-19 seq71838 105 6e-18 seq72197 100 3e-16 seq68586 95.1 1e-14 seq2576 84.2 2e-11 seq21823 82.4 7e-11 >seq71924 Length=31871 Score = 282 bits (312), Expect = 4e-71 Identities = 568/831 (68%), Gaps = 15/831 (2%) Strand=Plus/Minus Query 57569 CATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCT 57628 ||| ||| | | ||||| ||||| || || || || ||||| | ||||||||| || || Sbjct 9219 CATCTGGGAGTTCTACAAGAAGGCTGAGGCTTCCTTCTGGACTGCCGAAGAAGTCGATCT 9160 Query 57629 GTCTAAGGATCTGAGCGATTGGGATTCCCTCA--AAGAATCTGAGAGAAATTTTATTAAA 57686 | || ||| | |||| || |||| ||| | |||| | || ||||| Sbjct 9159 AGGCAGCGACTTGAATCACTGGGCCTCGCTCACTAAGGAC--GAGAAGCACTTCATTAAG 9102 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 |||||| |||| || ||||| || || ||||||||| |||||| | | | | Sbjct 9101 CACGTGCTGGCCTTCTTCGCGGCTAGTGACGGTATTGTTGCTGAGAATCTCGCTGTTCGC 9042 Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806 || | ||||||||||| | |||||| | ||||| || ||||| ||| | |||||| Sbjct 9041 TTCATGAAGGAAGTGCAAGTTCCCGAGGCGCGTTGCTTCTATGGATTCCAAATCGCCATT 8982 Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGAC 57866 |||||| | || || || |||||||| || || ||||| || ||||| |||||| | Sbjct 8981 GAAAACATTCACTCGGAGATGTATTCCCTTCTTATCGACACCTACGTCAAGGACCCTATC 8922 Query 57867 GAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAG 57926 ||||| | | || ||| ||| |||||||| |||| | || |||||||| ||| Sbjct 8921 GAGAAGGATCGCCTCTTCCGCGCCATCGAAACTGTGCCTTCAGTCAAAAAGAAGGCCGAG 8862 Query 57927 TGGTCAATCAAATGGAT----AAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGC 57982 ||| | ||||| ||||| || || |||| || || ||||| ||| | || || | Sbjct 8861 TGGGCTATCAAGTGGATCGGCAAGGAGGGCCA-GGAGACCTTCGCTGAGCGTCTCATTGG 8803 Query 57983 GTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTT-TGCGGCAATATTTTGGATGA 58041 || || ||||| || || || ||||| ||||||||||| ||| | || |||||| ||| Sbjct 8802 TTTTGCTGCCGTAGAGGGCATTTTCTTCTCGGGCAGCTTCTGC-TCCATCTTTTGGCTGA 8744 Query 58042 AGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGG 58101 |||| || ||||| |||||||| || | ||| ||||||| | || || ||||||| Sbjct 8743 AGAAGCGAGGCCTCATGCCCGGACTCTCCTTTTCCAACGAGCTCATCAGCCGTGACGAGG 8684 Query 58102 GTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCA-CATTGTCAATAAACCGACGCGG 58160 |||| || || ||||| || || | || | || | ||||| ||||| ||| Sbjct 8683 GTCTTCACTGCGACTTTGCTTGTCTCCTCTA-TAGCATGCTCGTCAACAAACCCTCGCCC 8625 Query 58161 GATCGCATCTTGGAC-ATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGA 58219 || | || ||| || || |||||| |||| ||| || || ||||| |||||||| Sbjct 8624 GA-GGTTCCTAAGACGATCATTCTCGAGGCTGTCGAGATAGAGAAGGAGTTCGTCACCGA 8566 Query 58220 AGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTT 58279 | || || ||||| | |||| |||||| || | |||| ||||||| || || Sbjct 8565 GTCTCTCCCCGTGGCTCTCATCGGCATGAACGCCGAGCTCATGTGCCAGTACATCGAATT 8506 Query 58280 TGTTGCCGACAGACTTTTGCTCGAACTGATTGGAGAGCGTCATTACAACACGAAAAATCC 58339 || |||||| | || | | | || | ||| |||| | ||| || || || Sbjct 8505 CGTCGCCGACCGTCTCCTCGTGGCTCTTGGCTGTGAGAAGCATTTCCACAAGACCAACCC 8446 Query 58340 GTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGA 58390 || | ||| | || |||||||||||||||||||| ||||| ||||| Sbjct 8445 CTTCCCCTGGATGGAGCTTATCTCGCTCGAGGGCAAGACCAACTTCTTCGA 8395 >seq71032 Length=21228 Score = 163 bits (180), Expect = 3e-35 Identities = 611/945 (65%), Gaps = 26/945 (3%) Strand=Plus/Minus Query 23027 GAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACAT 23086 ||||| | ||||| || ||||| ||||| ||| ||| ||| | | || || || Sbjct 15226 GAGGCCAAGTTGCACACAGCCACTTCGTCGGGGGAAGTGAACTGGATCACCTCTGTGCAC 15167 Query 23087 AGATTGCTACACTTTATCGTGCCCAAATTGCT-CTGGTTGCTTTTTCGATTGCACGAATC 23145 | ||| ||| || ||||| | | ||| |||||| || || ||||| || || Sbjct 15166 AAGTTGGACGACTGGATGGTGCCGAGGT-GCTGCTGGTTAGACTTGCGGTTGCAGGAGTC 15108 Query 23146 CTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACAT 23205 ||||||||||||||| || ||||||||||| | ||| ||||||| ||| | ||| | Sbjct 15107 CTTGTAGAGCATGTAGGGAGTGCCCGTCTCAATCTGAGACTCGAGGATAGAGAACCAGAG 15048 Query 23206 AGTCTGAGCGTGAAC---ACGTCGCACGTACCTGCCTTCTTCCTCGTACTTTTGGTACAA 23262 |||||| | || ||| || || | || || | |||||| | ||||| Sbjct 15047 TTCCTGAGCCTTCACGACACGGCGGGCG---CGACCCTCCTGCTCGTAGCGCTCGTACAG 14991 Query 23263 CGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAG 23322 | | ||| ||| | || || ||| ||| || || | | | || || | ||| Sbjct 14990 CTGCTTAAACTCGTCTCCCCAAGTATCGAACAGACCCGGGGCCTCGTTGGGGCAGAAGAG 14931 Query 23323 ACTCCA--CATTGA-GTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGC 23379 ||| || | |||| || ||| || ||| ||||| || || | ||| | | | Sbjct 14930 CGACCAGTCACCGCCGTCACGCACA-CGC-TC-CATGAAAAGGTCGGGAACCCACAAACC 14874 Query 23380 GTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAA 23439 |||||| || ||||| || || |||||| || ||| ||||| || | || | || Sbjct 14873 GTAGAAGAGATCGCGAGCACGGTGCTCCTCCTTACCGTGATTCTTCTTGAGCTCGAGGAA 14814 Query 23440 GTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATT 23499 || || | || |||||||| ||||| ||||| | |||||| || ||| | |||| Sbjct 14813 TTCGAAGATATCGGCATGCCAGGGCTCAAGGTAGATGGCAAAGGCTCCCTTGCGCTTACC 14754 Query 23500 GCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACC 23559 ||| || || || ||||| || || |||| |||||| || | |||||||| | |||||| Sbjct 14753 GCCACCTTGGTCAACGTAGCGAGCAGTGTCGTTGTATACGCGAAGCATCGGAATGAGACC 14694 Query 23560 GTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTG---CTCGAACGTTGTGAAC 23616 || || | |||| ||| | | || || | |||| | | ||| || Sbjct 14693 ATTCGAGGTGCCGTTGGTGCCGCGGA---TGTAAGAGTTGGAAGCTCGGATGCGGTGTAC 14637 Query 23617 GTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTA 23676 | || || || || | || || || || | || || || || ||||||||||| Sbjct 14636 AGCAAGGCCGATACCCCCAGCGGACTTAGAGATGAGGGCACACTGCTTGAGAGTGTCGTA 14577 Query 23677 GATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTT 23736 ||| || || || ||||||||| | | | | ||| |||||||| | |||| Sbjct 14576 GATCCCTTCAATTGAGTCCTCTTTCATGGTAAGGAGGAAGCACGAAGAAAGCTGCGGGCG 14517 Query 23737 GGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAG 23796 || || |||| ||| || || ||| | ||||| || ||| | | || | || Sbjct 14516 AGGAGTGCCGGCATTGAAGAGGGTAGGGGTAGCGTGGGTGAAGAGTTGCTGGGAGAGAAG 14457 Query 23797 ATTGTACGTGTCGATG---GCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCG 23853 | ||| || ||||| |||| | | |||||| ||| | || | |||||||| Sbjct 14456 GTCGTAGGTTTCGATAACAGCGGGAATATTGTCCTT---GTGAAGGCCAACAGCGACGCG 14400 Query 23854 CATCATCATGTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACG 23913 ||||| ||| | || ||||||||||| | ||| | || ||||| ||||| ||||| Sbjct 14399 CATCAGCATATGCTGTGGTCTCTCGACGATCTTGCCATCGATCTTGAAAAGATAGGAACG 14340 Query 23914 TTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATC 23958 | | || ||||| || || || ||||| ||||||| || Sbjct 14339 CTCGAGAGTCTTAAAACCGAAGTATGTGTAGTTGTAGTCACGCTC 14295 Score = 141 bits (156), Expect = 8e-29 Identities = 333/502 (66%), Gaps = 8/502 (2%) Strand=Plus/Minus Query 22099 GGCGGTCTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATA 22158 ||| |||| ||| || || ||||| |||||||| || || ||| ||| || || || || Sbjct 16151 GGCAGTCTGGTCGACGGTGAACTGGATGGCGTTGGCAGCGGGTCGGGTTCGCAGGTAGTA 16092 Query 22159 CATGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATA 22218 |||||| |||||||||||| | ||||| ||||| || || || ||||| | || | | Sbjct 16091 CATGCCAGTCTTCAGACCCTTATTCCAGGCGTAGAAGTGCATGGACGTAAGCTTGGCGAA 16032 Query 22219 ACTCGGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATC 22278 | ||| | ||||||| | |||| || ||||| || || ||| | || ||||| Sbjct 16031 AGAAGGCTCGCCCATGTAAATGTTGAGAGATTGACTTTGGTCAATATAAGCGGAGCGATC 15972 Query 22279 GGCGGCCATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCT 22338 ||| ||||| | || | | |||| | || ||||| || |||||||| || | | | Sbjct 15971 GGCAGCCATGTCGATTACTACACGCTGAGGAATCTCCCACACTGTCTTGTAAAGCTTCTT 15912 Query 22339 GATCTCTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATT 22398 || || |||||| ||||| | ||| || || ||||| | | | | | || Sbjct 15911 GAGATCGTCAGGTATCTCCTCGATGCGCTGCACCGAACCGTTGTGGGCCACCAGCTTGTT 15852 Query 22399 TTTAATCGTATCGTTCCACAAACCGATGGCGGTC----AAATCTTTGACCAGATGACGGT 22454 || | | | ||||| || ||| || | || || ||| || || Sbjct 15851 CTTGAGGGCGGGGGACCACAGGCC----GCGCTCCTGAAGGTCACGGAGCAGGTGCTCGT 15796 Query 22455 TCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTT 22514 | || || ||| || || | | || |||||| ||| |||||||| ||| | || | Sbjct 15795 TGACGACGGTAAAGTCACCAGCAAGGATGCGGCGAGTGTAGATGTTGGAGGTGTAGGGCT 15736 Query 22515 CGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACA 22574 |||| | || || || || || ||||||| |||||| || || ||||| || || | | Sbjct 15735 CGAAGCACTCGTTATTGCCGAGGATCTGAGAGGTCGAGGCAGTGGGCATAGGAGCGACGA 15676 Query 22575 GTAGCGAGTTTCTCAAGCCGTG 22596 | |||||||| || | ||||| Sbjct 15675 GCAGCGAGTTCCTGAGACCGTG 15654 >seq71761 Length=19511 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| || || |||| ||||| || || || |||| || || | | Sbjct 8178 ATGCAGATCTTCGTCAAAACGTTGACTGGCAAGACCATTACTCTCGAGGTCGAGTCCAGC 8119 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || |||| || ||||||||||||| | || ||||||||| Sbjct 8118 GACACGATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAAGGCATCCCCCCCGACCAG 8059 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || ||||| ||||| ||| | || ||| | ||| || ||| || ||| Sbjct 8058 CAGCGTCTTATTTTCGCCGGCAAGCAGCTTGAGGACGGTCGCACTCTGGCCGACTACAAC 7999 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 |||||||| ||||| ||||| || || || | |||| ||||| || Sbjct 7998 ATTCAAAAGGAATCTACTCTCCACCTTGTGTTGCGACTCAGGGGTGG 7952 Score = 125 bits (138), Expect = 6e-24 Identities = 167/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 |||||||| |||||||| ||||| || || ||||| || || || |||| || || | Sbjct 8409 AACATGCAGATTTTCGTCAAGACCCTCACTGGCAAGACCATTACTCTCGAGGTCGAGTCC 8350 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 ||||| |||| | || || |||| || ||||||||||||| | || |||||| Sbjct 8349 AGCGACACGATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAAGGCATTCCCCCCGAC 8290 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 |||||||| || || ||||| || || ||| | || ||| | ||| || ||| || Sbjct 8289 CAGCAGCGCCTTATCTTCGCCGGTAAGCAGCTTGAGGACGGTCGCACTCTGGCCGACTAC 8230 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| || || || |||||||| ||||| || || | ||| | || |||| Sbjct 8229 AACATCCAGAAGGAGTCGACTCTCCATCTCGTGCTCCGCCTGCGTGGTGGTA 8178 >seq71072 Length=54149 Score = 118 bits (130), Expect = 9e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| |||||||| || ||||| || || ||| |||| || || | Sbjct 14049 CATGCAGATCTTCGTCAAGACTCTTACCGGCAAGACTATTACCCTCGAGGTGGAGTCCAG 13990 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | || | || || |||| || ||||||||| ||| | || |||||||| Sbjct 13989 CGACACCATTGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCA 13930 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| || || ||||| ||||| ||| | || ||| | || | ||| || || Sbjct 13929 GCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACCCTCGCCGACTACAA 13870 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||||||||| || |||||||| || || || ||| | ||| | || || Sbjct 13869 CATTCAAAAGGAGTCGACTCTCCACCTTGTGCTTCGCCTGCGCGGTGG 13822 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| |||||||| || ||||| || |||||| | || || || | Sbjct 14277 CATGCAGATCTTCGTCAAGACTCTTACGGGCAAGACCATCACCCTTGAGGTGGAGTCCAG 14218 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | || | || || || | || ||||||||| ||| | ||||||||||| Sbjct 14217 CGACACCATTGAGAACGTAAAGCAAAAGATCCAGGACAAGGAGGGCATCCCGCCCGACCA 14158 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| || || ||||| ||||| ||| | || ||| || | ||| || || Sbjct 14157 GCAGCGCCTCATCTTCGCGGGCAAGCAGCTCGAGGACGGCCGCACCCTCGCCGACTACAA 14098 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||| || || || ||||| || || || || ||| | ||| | || || Sbjct 14097 CATCCAGAAGGAGTCGACGCTCCACCTCGTGCTTCGTCTGCGCGGTGG 14050 >seq72303 Length=46806 Score = 116 bits (128), Expect = 3e-21 Identities = 165/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 |||||||| || ||||| ||||| || || ||||| || |||||| |||| || ||| | Sbjct 30320 AACATGCAGATCTTCGTCAAGACCCTTACGGGCAAGACCATCACCCTCGAGGTGGAATCC 30379 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 ||||| | || | || || |||| || ||||||||| ||| | || |||||| Sbjct 30380 AGCGACACCATTGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATTCCCCCCGAC 30439 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 |||||||| || || ||||| || || ||| | || ||| | ||| || ||| || Sbjct 30440 CAGCAGCGCCTCATCTTCGCCGGTAAGCAGCTTGAGGACGGTCGCACTCTGGCCGACTAC 30499 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| || || || || ||||| || || || || | ||| | || |||| Sbjct 30500 AACATCCAGAAGGAGTCAACTCTCCACCTCGTGCTCCGCCTGCGTGGTGGTA 30551 >seq72113 Length=77669 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| |||||| |||| ||||| || || || |||| || ||| | | Sbjct 39339 ATGCAGATCTTCGTCAAGACTTTGACTGGCAAGACCATTACTCTCGAGGTGGAATCCAGC 39398 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || |||| || ||||||||| ||| | || ||||||||| Sbjct 39399 GACACGATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAG 39458 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || |||||||| || || ||| | || ||| | ||| || ||| || ||| Sbjct 39459 CAGCGCCTTATATTCGCCGGTAAGCAGCTTGAGGACGGTCGCACTCTGGCCGACTACAAC 39518 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || || || || ||||| || || || || Sbjct 39519 ATCCAGAAGGAGTCAACTCTCCACCTCGTGCT 39550 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| |||||||| || ||||| || || || |||| || || | | Sbjct 39795 ATGCAGATCTTCGTCAAGACTCTAACGGGCAAGACCATTACTCTCGAGGTGGAGTCCAGC 39854 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || |||| || ||||||||| ||| | || ||||||||| Sbjct 39855 GACACGATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATTCCTCCCGACCAG 39914 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || ||||| ||||| ||| | || ||| | || | || || ||| Sbjct 39915 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACCCTCGCTGACTACAAC 39974 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || ||||| || || || || || || || || | ||| | ||||| Sbjct 39975 ATCCAAAAGGAGTCTACCCTCCACCTCGTCCTCCGCCTGCGCGGCGG 40021 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || || ||||| || || || |||| || || | | Sbjct 39567 ATGCAGATCTTCGTCAAGACCCTTACGGGCAAGACCATTACTCTCGAGGTGGAGTCCAGC 39626 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || || | || ||||||||| ||| | || ||||||||| Sbjct 39627 GACACGATCGAGAACGTGAAGCAAAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAG 39686 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC 31348 ||||| || || ||||| ||||| ||| | || ||| Sbjct 39687 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGAC 39722 >seq71540 Length=49709 Score = 111 bits (122), Expect = 1e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| || || ||||| ||||| || || || || ||| |||| || || | || Sbjct 42732 CATGCAAATCTTTGTTAAGACGCTGACGGGGAAGACCATTACCCTCGAGGTGGAGTCTTC 42791 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | |||| || || || | ||| |||||||| ||| | ||||| ||||| Sbjct 42792 AGACACCATAGAAAACGTAAAGCAAAAGATACAAGACAAGGAGGGCATCCCGCCTGACCA 42851 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| || || || |||||||| ||| | || ||| || || ||| || || Sbjct 42852 GCAGCGACTTATTTTTGCTGGCAAGCAGCTTGAGGACGGCCGCACCCTGGCCGACTACAA 42911 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410 |||||||| || || || || ||| |||| || ||||| Sbjct 42912 TATTCAAAAGGAGTCTACCCTCCATTTGGTGCTGAGACT 42950 >seq68691 Length=2609 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || || ||||| || || || |||| || || | | Sbjct 191 ATGCAGATCTTCGTCAAGACCCTTACGGGCAAGACCATTACTCTCGAGGTGGAGTCCAGC 250 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || || | || ||||||||| ||| | |||||||||||| Sbjct 251 GACACGATCGAGAACGTGAAGCAAAAGATCCAGGACAAGGAGGGCATCCCGCCCGACCAG 310 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || || || ||||| ||| |||| ||| | || | ||| || ||| Sbjct 311 CAGCGCCTCATCTTTGCCGGCAAGCAGCTGGAGGACGGTCGCACCCTCGCCGACTACAAC 370 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || ||||| || |||||||| || || || ||| | ||| | || |||| Sbjct 371 ATCCAAAAGGAGTCGACTCTCCACCTCGTGCTTCGTCTGCGTGGTGGTA 419 >seq71838 Length=148749 Score = 105 bits (116), Expect = 6e-18 Identities = 117/156 (75%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| || || ||||| || |||||| | || || || |||| Sbjct 73043 CATGCAGATCTTCGTCAAGACCCTTACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTC 72984 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| |||||| || || |||| || ||||||||| ||| | || || || || Sbjct 72983 CGACACCATCGAAAATGTTAAGCAGAAGATTCAGGACAAGGAGGGCATCCCTCCTGATCA 72924 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 ||||||||| || ||||| ||||| ||| | || || Sbjct 72923 GCAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAGGA 72888 >seq72197 Length=52184 Score = 100 bits (110), Expect = 3e-16 Identities = 161/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 |||||||| || || || ||||| ||||| ||||| || || ||| |||| || || | Sbjct 20648 AACATGCAGATATTTGTTAAGACCCTGACCGGCAAGACCATTACCCTCGAGGTGGAGTCC 20707 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 ||||| |||| | || || || | || ||||||||| ||| | || |||||| Sbjct 20708 AGCGACACGATCGAGAACGTGAAGCARAAGATCCAGGACAAGGAGGGCATCCCCCCCGAC 20767 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 |||||||| || || ||||| ||||| ||| | || ||| || | || || Sbjct 20768 CAGCAGCGCCTCATTTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTTGCTGACTAC 20827 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| || || || |||||||| || || || || | ||| | || |||| Sbjct 20828 AACATCCAGAAGGAGTCGACTCTCCACCTCGTGCTCCGCCTGCGTGGTGGTA 20879 >seq68586 Length=2644 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| || || |||| ||||| || || || |||| || || | | Sbjct 455 ATGCAGATCTTCGTCAAAACGTTGACTGGCAAGACCATTACTCTCGAGGTGGAGTCCAGC 514 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || |||| || ||||||||| ||| | || ||||||||| Sbjct 515 GACACGATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAG 574 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || ||||||||||| ||| | || ||| | || | || || ||| Sbjct 575 CAGCGTCTTATTTTCGCTGGCAAGCAGCTCGAGGACGGTCGCACCCTCGCTGACTACAAC 634 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || ||||| || || || || || || || || Sbjct 635 ATCCAAAAGGAGTCTACCCTCCACCTCGTCCT 666 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 31195 GCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGA 31254 ||| || ||||| ||||| || || ||||| || |||||| | || || || | ||| Sbjct 1 GCAGATCTTCGTCAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTGGAGTCCAGCGA 60 Query 31255 CAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCA 31314 || |||| | || || |||| || |||||||| ||| | |||||||||||||| Sbjct 61 CACGATCGAGAACGTGAAGCAGAAGATCCAAGACAAGGAGGGCATCCCGCCCGACCAGCA 120 Query 31315 GCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACAT 31374 ||| || || ||||| ||||| ||| | || ||| || | || || ||||| Sbjct 121 GCGCCTCATCTTCGCGGGCAAGCAGCTCGAGGACGGCCGCACCCTTGCTGACTACAACAT 180 Query 31375 TCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || || ||||| || || || || || | ||| | || |||| Sbjct 181 CCAGAAGGAGTCGACGCTCCACCTCGTGCTCCGCCTGCGTGGTGGTA 227 Score = 84.2 bits (92), Expect = 2e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || || ||||| || |||||| | || || || | | Sbjct 227 ATGCAGATCTTCGTCAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTGGAGTCCAGC 286 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || || |||| || ||||||||| ||| | |||||||||||| Sbjct 287 GACACCATTGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCGCCCGACCAG 346 Query 31313 CAGCGTCTAATATTCGCTGGCAAACA 31338 ||||| || || || || ||||| || Sbjct 347 CAGCGCCTCATCTTTGCCGGCAAGCA 372 >seq2576 Length=127 Score = 84.2 bits (92), Expect = 2e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 31285 GGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGA 31344 ||||||||| || | || |||||||||||||| || || ||||| ||||| ||| |||| Sbjct 7 GGACAAGGAGGGTATCCCTCCCGACCAGCAGCGCCTCATCTTCGCGGGCAAGCAGCTGGA 66 Query 31345 AGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| | || | ||| || ||||||||||| || |||||||| || || || || Sbjct 67 GGACGGTCGCACCCTCGCCGACTACAACATTCAAAAGGAGTCGACTCTCCACCTTGTGCT 126 Query 31405 T 31405 | Sbjct 127 T 127 >seq21823 Length=199 Score = 82.4 bits (90), Expect = 7e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 31195 GCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGA 31254 ||| || ||||| |||||| |||| ||||| || || || |||| || || | ||| Sbjct 199 GCAGATCTTCGTCAAGACTTTGACTGGCAAGACCATTACTCTCGAGGTGGAGTCCAGCGA 140 Query 31255 CAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCA 31314 || |||| | | || |||| || ||||||||| ||| | || || |||||||| Sbjct 139 CACGATCGAGAACCTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAGCA 80 Query 31315 GCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACAT 31374 ||| || || ||||| ||||| ||| | || ||| || | ||| || ||||| Sbjct 79 GCGCCTTATTTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCGCCGACTACAACAT 20 Query 31375 TCAAAAAGAATCGACTCT 31392 || || || |||||||| Sbjct 19 CCAGAAGGAGTCGACTCT 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445362920115120