Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20culbertsoni_20[genbank_20GCA_5F000826265.1_202015-01- 06] 72,411 sequences; 55,543,795 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq71761 91.5 1e-13 >seq71761 Length=19511 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 19996 CAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATC 20055 |||||| | || || |||||||| ||||| |||||||| ||| ||| ||| | || Sbjct 7966 CAACACAAGGTGGAGAGTAGATTCCTTTTGAATGTTGTAGTCGGCCAGAGTGCGACCGTC 8025 Query 20056 TTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTC 20115 || | || ||||| || ||||||| | ||| || ||| ||| | |||||| ||||| Sbjct 8026 CTCAAGCTGCTTGCCGGCGAAAATAAGACGCTGCTGGTCGGGGGGGATGCCTTCCTTGTC 8085 Query 20116 GGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGT 20175 || || || ||||| | | | | |||| | || || | |||||||| Sbjct 8086 CTGGATCTTCTGCTTCACGTTCTCGATCGTGTCGCTGGACTCGACCTCGAGAGTAATGGT 8145 Query 20176 TTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 ||||| |||||||||||||| || || ||||| Sbjct 8146 CTTGCCAGTCAACGTTTTGACGAAGATCTGCAT 8178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419216910493491