Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20culbertsoni_20[genbank_20GCA_5F000826265.1_202015-01- 06] 72,411 sequences; 55,543,795 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq69567 82.4 4e-11 >seq69567 Length=9804 Score = 82.4 bits (90), Expect = 4e-11 Identities = 70/85 (82%), Gaps = 1/85 (1%) Strand=Plus/Minus Query 11447 AAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCT 11506 |||| ||| ||||| || |||||||||| ||||||| ||||||||||||| ||||| Sbjct 6014 AAATAAAAATGGCCAGTGTGGGGATCGAACCCACGACCTTGGCGTTATTAGCACCACGCT 5955 Query 11507 CTRACCAACTGAGCTAATGGGCCGT 11531 || ||||||| |||||| |||||| Sbjct 5954 CT-ACCAACTAAGCTAACCGGCCGT 5931 Lambda K H 0.639 0.410 0.921 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261260431646236