Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20culbertsoni_20[genbank_20GCA_5F000826265.1_202015-01- 06] 72,411 sequences; 55,543,795 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq71540 123 2e-23 seq72197 116 3e-21 seq68586 114 1e-20 seq71072 109 4e-19 seq71761 105 5e-18 seq68691 105 5e-18 seq72303 102 7e-17 seq71822 102 7e-17 seq72113 100 2e-16 seq21823 100 2e-16 seq71838 96.9 3e-15 >seq71540 Length=49709 Score = 123 bits (136), Expect = 2e-23 Identities = 169/236 (72%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || ||||| |||| ||| || || ||||||||||| || |||||||||||| Sbjct 42959 CCCCCACGAAGTCTCAGCACCAAATGGAGGGTAGACTCCTTTTGAATATTGTAGTCGGCC 42900 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | ||||||| | || ||||| ||| ||||||| ||||| ||||| || Sbjct 42899 AGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCAAAAATAAGTCGCTGCTGGTCAGGCGGG 42840 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | |||||| ||||| || | ||||| || | | | ||||| | |||| Sbjct 42839 ATGCCCTCCTTGTCTTGTATCTTTTGCTTTACGTTTTCTATGGTGTCTGAAGACTCCACC 42780 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTGTAGCC 16944 || | ||| ||||| || || |||||||| || ||||| || ||||| || |||| Sbjct 42779 TCGAGGGTAATGGTCTTCCCCGTCAGCGTCTTAACAAAGATTTGCATGGTGGAGCC 42724 >seq72197 Length=52184 Score = 116 bits (128), Expect = 3e-21 Identities = 150/208 (72%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || |||||||| || ||||||||||| || | ||| | ||||||| | || Sbjct 20853 TGGAGAGTCGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGGCCGTCCTCGAGCTGC 20794 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| || |||| || ||||| ||||| || | |||||| ||||| || | Sbjct 20793 TTGCCGGCGAAAATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTY 20734 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||||| | | | ||||||| || |||| || | ||| ||||| || |||||| Sbjct 20733 TGCTTCACGTTCTCGATCGTGTCGCTGGACTCCACCTCGAGGGTAATGGTCTTGCCGGTC 20674 Query 16913 AGCGTTTTGACAAAAATCTGCATTTTGT 16940 || || || ||||| |||||||| |||| Sbjct 20673 AGGGTCTTAACAAATATCTGCATGTTGT 20646 >seq68586 Length=2644 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || |||||||| || ||||||||||| || | ||| | ||||||| | ||| Sbjct 429 TGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCGAGTTGC 370 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| ||| | || || ||||| ||||| || | |||||| ||||| || | | Sbjct 369 TTGCCGGCAAAGATGAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTC 310 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||||| | | | ||||||| || |||| || | ||||||||| || || || Sbjct 309 TGCTTCACGTTCTCAATGGTGTCGCTGGACTCCACCTCAAGGGTGATGGTCTTGCCCGTA 250 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 || || ||||| || |||||||| Sbjct 249 AGGGTCTTGACGAAGATCTGCAT 227 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || ||||||||||| ||||||||||| || | ||| ||||||| | || Sbjct 657 TGGAGGGTAGACTCCTTTTGGATGTTGTAGTCAGCGAGGGTGCGACCGTCCTCGAGCTGC 598 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| || ||||||| ||||| ||||| || | |||||| ||||| || | | Sbjct 597 TTGCCAGCGAAAATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTC 538 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||||| | | | ||||||| || |||| || | || ||||| || || ||| Sbjct 537 TGCTTCACGTTCTCGATCGTGTCGCTGGACTCCACCTCGAGAGTAATGGTCTTGCCAGTC 478 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 | ||||||||| || |||||||| Sbjct 477 AACGTTTTGACGAAGATCTGCAT 455 Score = 111 bits (122), Expect = 1e-19 Identities = 145/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || ||||| |||||||| || ||||||||||| || | ||| | ||||||| | || Sbjct 201 TGGAGCGTCGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGGCCGTCCTCGAGCTGC 142 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 |||||||| | || || ||||| ||||| || | |||||| ||||| || | | Sbjct 141 TTGCCCGCGAAGATGAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCTTGGATCTTC 82 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||||| | | | ||||||| || |||| || | ||||||||| || || || Sbjct 81 TGCTTCACGTTCTCGATCGTGTCGCTGGACTCCACCTCAAGGGTGATGGTCTTGCCCGTA 22 Query 16913 AGCGTTTTGACAAAAATCTGC 16933 || || ||||| || |||||| Sbjct 21 AGGGTCTTGACGAAGATCTGC 1 >seq71072 Length=54149 Score = 109 bits (120), Expect = 4e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || ||||| |||||||| || |||||||||||||| | ||| | ||||||| | || Sbjct 14074 TGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGC 14133 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 |||||||| | || || ||||| ||||| || | |||||| ||||| || | Sbjct 14134 TTGCCCGCGAAGATGAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTT 14193 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 ||||| || | | | ||||||| || |||| || | ||||||||| || || || Sbjct 14194 TGCTTTACGTTCTCAATGGTGTCGCTGGACTCCACCTCAAGGGTGATGGTCTTGCCCGTA 14253 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 || || ||||| || |||||||| Sbjct 14254 AGAGTCTTGACGAAGATCTGCAT 14276 Score = 105 bits (116), Expect = 5e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || ||||||||||| |||||||||||||| | ||| ||||||| | || Sbjct 13846 TGGAGAGTCGACTCCTTTTGAATGTTGTAGTCGGCGAGGGTGCGACCGTCCTCGAGCTGC 13905 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| || | || || ||||| ||||| || | |||||| ||||| || | | Sbjct 13906 TTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTC 13965 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||||| | | | ||||||| || |||| || | ||| || || || ||||| Sbjct 13966 TGCTTCACGTTCTCAATGGTGTCGCTGGACTCCACCTCGAGGGTAATAGTCTTGCCGGTA 14025 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 || || ||||| || |||||||| Sbjct 14026 AGAGTCTTGACGAAGATCTGCAT 14048 >seq71761 Length=19511 Score = 105 bits (116), Expect = 5e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || || |||||||| |||||||||||||||| || ||||||| | || Sbjct 7976 TGGAGAGTAGATTCCTTTTGAATGTTGTAGTCGGCCAGAGTGCGACCGTCCTCAAGCTGC 8035 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| || ||||||| ||||| ||||| || | ||| || ||||| || | | Sbjct 8036 TTGCCGGCGAAAATAAGACGCTGCTGGTCGGGGGGGATGCCTTCCTTGTCCTGGATCTTC 8095 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||||| | | | ||||||| || ||| || | || ||||| || || ||| Sbjct 8096 TGCTTCACGTTCTCGATCGTGTCGCTGGACTCGACCTCGAGAGTAATGGTCTTGCCAGTC 8155 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 | ||||||||| || |||||||| Sbjct 8156 AACGTTTTGACGAAGATCTGCAT 8178 Score = 98.7 bits (108), Expect = 8e-16 Identities = 152/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || || | ||| || || |||||||| || |||||||||||||||| || ||||| Sbjct 8195 AGCACGAGATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGAGTGCGACCGTCC 8254 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 || | || || || || | ||||| ||||| ||||| || | ||| || ||||| Sbjct 8255 TCAAGCTGCTTACCGGCGAAGATAAGGCGCTGCTGGTCGGGGGGAATGCCTTCCTTGTCC 8314 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 || | ||||||||| | | | ||||||| || ||| || | || ||||| Sbjct 8315 TGGATCTTCTGCTTCACGTTCTCGATCGTGTCGCTGGACTCGACCTCGAGAGTAATGGTC 8374 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTGT 16940 || || || || || ||||| ||||||||||| |||| Sbjct 8375 TTGCCAGTGAGGGTCTTGACGAAAATCTGCATGTTGT 8411 >seq68691 Length=2609 Score = 105 bits (116), Expect = 5e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || ||||||||||| |||||||||||||| | ||| ||||||||| || Sbjct 393 TGGAGAGTCGACTCCTTTTGGATGTTGTAGTCGGCGAGGGTGCGACCGTCCTCCAGCTGC 334 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| ||| | || || ||||| ||||| || | |||||| ||||| || | Sbjct 333 TTGCCGGCAAAGATGAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTT 274 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||||| | | | ||||||| || |||| || | || ||||| || || || Sbjct 273 TGCTTCACGTTCTCGATCGTGTCGCTGGACTCCACCTCGAGAGTAATGGTCTTGCCCGTA 214 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 || || ||||| || |||||||| Sbjct 213 AGGGTCTTGACGAAGATCTGCAT 191 Score = 105 bits (116), Expect = 5e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || ||||||||||| ||||||||||| || | || | ||||||| | ||| Sbjct 621 TGGAGGGTAGACTCCTTTTGGATGTTGTAGTCAGCGAGCGTGCGGCCGTCCTCGAGTTGC 562 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| ||| | || || ||||| ||||| || | |||||| ||||| || | Sbjct 561 TTGCCGGCAAAGATGAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTT 502 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||||| | | | ||||||| || |||| || | ||| || || || ||||| Sbjct 501 TGCTTCACGTTCTCAATGGTGTCGCTGGACTCCACCTCGAGGGTAATAGTCTTGCCGGTG 442 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 || || ||||| || |||||||| Sbjct 441 AGGGTCTTGACGAAGATCTGCAT 419 >seq72303 Length=46806 Score = 102 bits (112), Expect = 7e-17 Identities = 151/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || |||||||| || |||||||||||||||| || ||||||| | || Sbjct 30525 TGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGCCAGAGTGCGACCGTCCTCAAGCTGC 30466 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 || || || | || || ||||| ||||| || | |||||| ||||| || | | Sbjct 30465 TTACCGGCGAAGATGAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTC 30406 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||||| | | | ||||||| || ||| || | ||||||||| || || || Sbjct 30405 TGCTTCACGTTCTCAATGGTGTCGCTGGATTCCACCTCGAGGGTGATGGTCTTGCCCGTA 30346 Query 16913 AGCGTTTTGACAAAAATCTGCATTTTGTAGCCTT 16946 || || ||||| || |||||||| |||| || || Sbjct 30345 AGGGTCTTGACGAAGATCTGCATGTTGTTGCTTT 30312 >seq71822 Length=82145 Score = 102 bits (112), Expect = 7e-17 Identities = 147/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 16732 ATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTG 16791 ||| || || |||||||| || |||||||||||||||| | | | ||||||| | || Sbjct 74637 ATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGGCTGCGGCCGTCCTCGAGCTG 74578 Query 16792 TTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG-TCGGCAATTT 16850 ||||| || | ||||| ||||| || || ||| | |||||| ||| || | | | Sbjct 74577 CTTGCCGGCGAAGATAAGGCGCTGCTGCTCGGGAGGAATGCCCTCCTTGGTCTGGACCT- 74519 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 |||||||||| | || ||||||| || | | || | |||||||| || |||| Sbjct 74518 GCTGCTTCACGCTGTTGACCGTGTCGCTGGCCCCGACCTCGAGAGTGATGGTCTTGCCGG 74459 Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935 | || |||||||| || ||| |||| Sbjct 74458 TGAGGGTTTTGACGAATATCCGCAT 74434 >seq72113 Length=77669 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || ||||||||||| ||||||||||| || | ||| ||||||| | || Sbjct 39997 TGGAGGGTAGACTCCTTTTGGATGTTGTAGTCAGCGAGGGTGCGACCGTCCTCGAGCTGC 39938 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| || | || || ||||| ||||| ||| | |||||| ||||| || | | Sbjct 39937 TTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGGATCTTC 39878 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||||| | | | ||||||| || |||| || | || ||||| || || || Sbjct 39877 TGCTTCACGTTCTCGATCGTGTCGCTGGACTCCACCTCGAGAGTAATGGTCTTGCCCGTT 39818 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 || || ||||| || |||||||| Sbjct 39817 AGAGTCTTGACGAAGATCTGCAT 39795 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || ||||| | || || | || || || |||||||| || ||||||||||| || Sbjct 39793 CCACCACGTAGGCGGAGCACGAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCG 39734 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | ||||||| | || ||||| || | || || ||||| ||||| || Sbjct 39733 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGGG 39674 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | |||||| ||||| || | |||||||| | | | ||||||| || |||| Sbjct 39673 ATGCCCTCCTTGTCCTGGATCTTTTGCTTCACGTTCTCGATCGTGTCGCTGGACTCCACC 39614 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | || ||||| || || || || || ||||| || |||||||| Sbjct 39613 TCGAGAGTAATGGTCTTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 39567 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || |||||||| || |||||||||||||||| || ||||||| | || Sbjct 39541 TGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGCCAGAGTGCGACCGTCCTCAAGCTGC 39482 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 || || || | ||||| ||||| ||||| || | |||||| ||||| || | | Sbjct 39481 TTACCGGCGAATATAAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTC 39422 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||||| | | | ||||||| || ||| || | || ||||| || || ||| Sbjct 39421 TGCTTCACGTTCTCGATCGTGTCGCTGGATTCCACCTCGAGAGTAATGGTCTTGCCAGTC 39362 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 | || ||||| || |||||||| Sbjct 39361 AAAGTCTTGACGAAGATCTGCAT 39339 >seq21823 Length=199 Score = 100 bits (110), Expect = 2e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 16736 AGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGTTTG 16795 || || |||||||| || |||||||||||||| | ||| | ||||||| | || ||| Sbjct 2 AGAGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTG 61 Query 16796 CCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGCTGC 16855 || || ||||||| ||||| ||||| || | |||||| ||||| || | |||| Sbjct 62 CCGGCGAAAATAAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGC 121 Query 16856 TTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTCAGC 16915 |||| | | | ||||||| || |||| || | || ||||| || || |||| Sbjct 122 TTCAGGTTCTCGATCGTGTCGCTGGACTCCACCTCGAGAGTAATGGTCTTGCCAGTCAAA 181 Query 16916 GTTTTGACAAAAATCTGC 16933 || ||||| || |||||| Sbjct 182 GTCTTGACGAAGATCTGC 199 >seq71838 Length=148749 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||||||||| || ||||||||||| || | ||| || | ||||| | || Sbjct 72840 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCGAGGGTCCTGCCATCCTCGAGCTGC 72899 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| || | || || ||||| || || ||| | |||||| ||||| ||| | | Sbjct 72900 TTGCCGGCGAAGATCAGACGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGAATCTTC 72959 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 ||||| || | | | |||||| | |||| || | |||||| || || || || Sbjct 72960 TGCTTAACATTTTCGATGGTGTCGGACGACTCCACCTCAAGGGTGATAGTCTTGCCCGTA 73019 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 || || ||||| || |||||||| Sbjct 73020 AGGGTCTTGACGAAGATCTGCAT 73042 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404730506168890