Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20culbertsoni_20[genbank_20GCA_5F000826265.1_202015-01- 06] 72,411 sequences; 55,543,795 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq72344 96.9 7e-15 seq72260 96.9 7e-15 seq72037 96.9 7e-15 seq71316 96.9 7e-15 seq71128 96.9 7e-15 seq70745 96.9 7e-15 seq70118 96.9 7e-15 seq70105 96.9 7e-15 seq70104 96.9 7e-15 seq69613 96.9 7e-15 seq69612 96.9 7e-15 seq68896 96.9 7e-15 seq68735 96.9 7e-15 seq68474 96.9 7e-15 seq68473 96.9 7e-15 seq68110 96.9 7e-15 seq67083 96.9 7e-15 seq33725 91.5 3e-13 >seq72344 Length=28007 Score = 96.9 bits (106), Expect = 7e-15 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 12587 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 12644 >seq72260 Length=90579 Score = 96.9 bits (106), Expect = 7e-15 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 51813 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 51870 >seq72037 Length=46906 Score = 96.9 bits (106), Expect = 7e-15 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 14758 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 14815 Score = 96.9 bits (106), Expect = 7e-15 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 17263 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 17206 >seq71316 Length=3311 Score = 96.9 bits (106), Expect = 7e-15 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 779 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 722 >seq71128 Length=117857 Score = 96.9 bits (106), Expect = 7e-15 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 47422 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 47365 >seq70745 Length=2775 Score = 96.9 bits (106), Expect = 7e-15 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 435 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 492 >seq70118 Length=6833 Score = 96.9 bits (106), Expect = 7e-15 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 2609 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 2552 >seq70105 Length=9224 Score = 96.9 bits (106), Expect = 7e-15 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 6726 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 6669 >seq70104 Length=9240 Score = 96.9 bits (106), Expect = 7e-15 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 6726 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 6669 >seq69613 Length=8012 Score = 96.9 bits (106), Expect = 7e-15 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 5005 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 4948 >seq69612 Length=8000 Score = 96.9 bits (106), Expect = 7e-15 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 4994 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 4937 >seq68896 Length=9866 Score = 96.9 bits (106), Expect = 7e-15 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 2126 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 2183 >seq68735 Length=1806 Score = 96.9 bits (106), Expect = 7e-15 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 1601 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 1658 >seq68474 Length=2043 Score = 96.9 bits (106), Expect = 7e-15 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 692 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 749 >seq68473 Length=952 Score = 96.9 bits (106), Expect = 7e-15 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 753 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 810 >seq68110 Length=1215 Score = 96.9 bits (106), Expect = 7e-15 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 437 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 494 >seq67083 Length=11423 Score = 96.9 bits (106), Expect = 7e-15 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 8250 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 8307 >seq33725 Length=127 Score = 91.5 bits (100), Expect = 3e-13 Identities = 55/58 (95%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||| Sbjct 13 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGACCCCCAC 70 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1026883208027651