Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20culbertsoni_20[genbank_20GCA_5F000826265.1_202015-01- 06] 72,411 sequences; 55,543,795 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq68691 86.0 5e-12 seq68586 86.0 5e-12 >seq68691 Length=2609 Score = 86.0 bits (94), Expect = 5e-12 Identities = 109/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| || | ||| || ||||| || || || || |||||| || |||||||| || || Sbjct 418 ACCACCACGCAGACGAAGCACGAGGTGGAGAGTCGACTCCTTTTGGATGTTGTAGTCGGC 359 Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 | || |||| |||| |||||||||||||| || ||||||||||| || ||| Sbjct 358 GAGGGTGCGACCGTCCTCCAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCGGGCGG 299 Query 34020 CACGCTCTCTTTGTCCATAATTTTTTGCTT 34049 | || ||| |||||| || |||||||| Sbjct 298 GATGCCCTCCTTGTCCTGGATCTTTTGCTT 269 >seq68586 Length=2644 Score = 86.0 bits (94), Expect = 5e-12 Identities = 109/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| || | ||| || ||||| || || || || ||||||||| |||||||| || || Sbjct 454 ACCACCACGCAGGCGTAGCACAAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGC 395 Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 | || |||| || | ||||||||||||||| || ||||||||||| || ||| Sbjct 394 GAGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCGGGCGG 335 Query 34020 CACGCTCTCTTTGTCCATAATTTTTTGCTT 34049 | || ||| |||||| || || ||||| Sbjct 334 GATGCCCTCCTTGTCCTGGATCTTCTGCTT 305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396711988833622