Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20culbertsoni_20[genbank_20GCA_5F000826265.1_202015-01- 06] 72,411 sequences; 55,543,795 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq71072 149 1e-30 seq68691 138 3e-27 seq71761 136 9e-27 seq72303 134 3e-26 seq72113 131 4e-25 seq21823 125 2e-23 seq68586 123 6e-23 seq71838 122 2e-22 seq72197 120 7e-22 seq71540 107 5e-18 seq71924 95.1 3e-14 seq30565 95.1 3e-14 seq18015 91.5 3e-13 seq71822 86.0 1e-11 >seq71072 Length=54149 Score = 149 bits (164), Expect = 1e-30 Identities = 175/233 (75%), Gaps = 3/233 (1%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| |||||||| || | ||| ||||| || | ||| || || ||||| || |||| Sbjct 14046 CATG-CCACCGCGCAGACGAAGCACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGT 14104 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||||||| ||||| ||||| || | || || || |||||||| || ||||| || Sbjct 14105 CGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTCGG 14164 Query 288362 CTGGGATTCCTTCTTTATCCTGGAT-TTTCGCTTTCACGTTTTCTATAGAATCGCTCGAT 288420 ||||| || || || |||||||| ||| ||||| ||||| || || | ||||| || Sbjct 14165 GCGGGATGCCCTCCTTGTCCTGGATCTTTTGCTTT-ACGTTCTCAATGGTGTCGCTGGAC 14223 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || ||||| ||||| || || |||||||||||||| |||||||| Sbjct 14224 TCCACCTCAAGGGTGATGGTCTTGCCCGTAAGAGTCTTGACGAAGATCTGCAT 14276 Score = 141 bits (156), Expect = 2e-28 Identities = 170/230 (74%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| || | ||| || || || | || || ||||| || || ||||||||| Sbjct 13822 CCACCGCGCAGGCGAAGCACAAGGTGGAGAGTCGACTCCTTTTGAATGTTGTAGTCGGCG 13881 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || |||||||| || ||||| || || ||| Sbjct 13882 AGGGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTG---GTCGGGG 13938 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || |||||||| ||| |||||||| || || | ||||| || || Sbjct 13939 GGAATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCAATGGTGTCGCTGGACTCC 13998 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| || || ||||| ||||| |||||||||||||| |||||||| Sbjct 13999 ACCTCGAGGGTAATAGTCTTGCCGGTAAGAGTCTTGACGAAGATCTGCAT 14048 >seq68691 Length=2609 Score = 138 bits (152), Expect = 3e-27 Identities = 172/232 (74%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||| ||||| || | || ||||| || | || || |||||||| || ||||| || Sbjct 646 TCCGCCGCGCAGGCGGAGGACGAGGTGGAGGGTAGACTCCTTTTGGATGTTGTAGTCAGC 587 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 ||||||||| ||||| || | ||| || || || ||||| || ||||| || || || Sbjct 586 GAGCGTGCGGCCGTCCTCGAGTTGCTTGCCGGCAAAGATGAGGCGCTGCTGG---TCGGG 530 Query 288366 G---ATTCCTTCTTTATCCTGGAT-TTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 | || || || || |||||||| ||| |||| |||||| || || | ||||| || | Sbjct 529 GGGAATGCCCTCCTTGTCCTGGATCTTTTGCTT-CACGTTCTCAATGGTGTCGCTGGACT 471 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || ||||| || || ||||| ||||| || ||||||||||| |||||||| Sbjct 470 CCACCTCGAGGGTAATAGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 419 Score = 134 bits (148), Expect = 3e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| ||||| || | || || |||||||| || ||||||||| Sbjct 417 CCACCACGCAGACGAAGCACGAGGTGGAGAGTCGACTCCTTTTGGATGTTGTAGTCGGCG 358 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || || ||||| || ||||| || ||| Sbjct 357 AGGGTGCGACCGTCCTCCAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCGGGCGGG 298 Query 288367 ATTCCTTCTTTATCCTGGAT-TTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 || || || || |||||||| ||| |||| |||||| || || | ||||| || || || Sbjct 297 ATGCCCTCCTTGTCCTGGATCTTTTGCTT-CACGTTCTCGATCGTGTCGCTGGACTCCAC 239 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || || ||||| || || || ||||||||||| |||||||| Sbjct 238 CTCGAGAGTAATGGTCTTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 191 >seq71761 Length=19511 Score = 136 bits (150), Expect = 9e-27 Identities = 173/237 (73%), Gaps = 6/237 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || |||||||| | || || || ||||| || |||||||| Sbjct 8180 CCACCACGCAGGCGGAGCACGAGATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCC 8239 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || |||||||| || ||||| || || ||| Sbjct 8240 AGAGTGCGACCGTCCTCAAGCTGCTTACCGGCGAAGATAAGGCGCTGCTGG---TCGGGG 8296 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || ||||| || |||||||| ||| |||||||| || || | ||||| || || Sbjct 8297 GGAATGCCTTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATCGTGTCGCTGGACTCG 8356 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGTTA 288480 || ||||| || || ||||| || || || ||||||||||| |||||||| ||||| Sbjct 8357 ACCTCGAGAGTAATGGTCTTGCCAGTGAGGGTCTTGACGAAAATCTGCATGTTGTTA 8413 >seq72303 Length=46806 Score = 134 bits (148), Expect = 3e-26 Identities = 172/236 (73%), Gaps = 6/236 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || ||||| || | || || || ||||| || |||||||| Sbjct 30549 CCACCACGCAGGCGGAGCACGAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGCC 30490 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || |||||||| || ||||| || || ||| Sbjct 30489 AGAGTGCGACCGTCCTCAAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGG---TCGGGG 30433 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || |||||||| ||| |||||||| || || | ||||| ||||| Sbjct 30432 GGAATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCAATGGTGTCGCTGGATTCC 30373 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGTT 288479 || ||||| ||||| ||||| || || || ||||||||||| |||||||| |||| Sbjct 30372 ACCTCGAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAAGATCTGCATGTTGTT 30317 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 288373 TCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGC 288432 || || |||||||| ||| |||||||| || || | ||||| ||||| || ||||| Sbjct 30651 TCCTTGTCCTGGATCTTCTGCTTCACGTTCTCAATGGTGTCGCTGGATTCCACCTCGAGG 30592 Query 288433 GTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| || || || ||||||||||| |||||||| Sbjct 30591 GTAATGGTCTTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 30551 >seq72113 Length=77669 Score = 131 bits (144), Expect = 4e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || ||||| || | || ||||| || | || || |||||||| || ||||| ||| Sbjct 40021 CCGCCGCGCAGGCGGAGGACGAGGTGGAGGGTAGACTCCTTTTGGATGTTGTAGTCAGCG 39962 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || |||||||| || ||||| || || Sbjct 39961 AGGGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGAGGA 39902 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| ||| |||||||| || || | ||||| || || || Sbjct 39901 ATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATCGTGTCGCTGGACTCCACC 39842 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || || ||||| || || |||||||||||||| |||||||| Sbjct 39841 TCGAGAGTAATGGTCTTGCCCGTTAGAGTCTTGACGAAGATCTGCAT 39795 Score = 129 bits (142), Expect = 1e-24 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || ||||| || | || || || ||||| || |||||||| Sbjct 39565 CCACCACGNAGGCGGAGCACGAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGCC 39506 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || ||||| || || ||||| || || ||| Sbjct 39505 AGAGTGCGACCGTCCTCAAGCTGCTTACCGGCGAATATAAGGCGCTGCTGG---TCGGGG 39449 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || |||||||| ||| |||||||| || || | ||||| ||||| Sbjct 39448 GGAATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATCGTGTCGCTGGATTCC 39389 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| || || ||||| || |||| |||||||||||| |||||||| Sbjct 39388 ACCTCGAGAGTAATGGTCTTGCCAGTCAAAGTCTTGACGAAGATCTGCAT 39339 Score = 125 bits (138), Expect = 2e-23 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || ||||| || | || || || ||||| || ||||| ||| Sbjct 39793 CCACCACGTAGGCGGAGCACGAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCG 39734 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || |||||||| || ||||| || ||| Sbjct 39733 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGGG 39674 Query 288367 ATTCCTTCTTTATCCTGGAT-TTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 || || || || |||||||| ||| |||| |||||| || || | ||||| || || || Sbjct 39673 ATGCCCTCCTTGTCCTGGATCTTTTGCTT-CACGTTCTCGATCGTGTCGCTGGACTCCAC 39615 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || || ||||| || || || ||||||||||| |||||||| Sbjct 39614 CTCGAGAGTAATGGTCTTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 39567 >seq21823 Length=199 Score = 125 bits (138), Expect = 2e-23 Identities = 141/189 (75%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||||||| ||||| ||||| || | || || || ||||| Sbjct 11 TCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAA 70 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || ||||| || | ||||| || || || |||||||| ||| |||| ||| Sbjct 71 ATAAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCAGGTTC 130 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||||| || || || ||||| || || ||||| || |||| |||||||||| Sbjct 131 TCGATCGTGTCGCTGGACTCCACCTCGAGAGTAATGGTCTTGCCAGTCAAAGTCTTGACG 190 Query 288463 AATATCTGC 288471 || |||||| Sbjct 191 AAGATCTGC 199 >seq68586 Length=2644 Score = 123 bits (136), Expect = 6e-23 Identities = 142/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||| ||||| ||||| ||||| || | ||| || || || ||| Sbjct 417 TCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCAAAG 358 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || ||||| || ||||| || || || |||||||| ||| |||||||| Sbjct 357 ATGAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTC 298 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||||| || || || || || ||||| ||||| || || || ||||||||| Sbjct 297 TCAATGGTGTCGCTGGACTCCACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACG 238 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 237 AAGATCTGCAT 227 Score = 118 bits (130), Expect = 2e-21 Identities = 161/225 (72%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || ||||| || | ||| || || ||||| || ||||| || Sbjct 225 CCACCACGCAGGCGGAGCACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCAGCA 166 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || |||||||| || ||||| || ||| Sbjct 165 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTCGGGCGGG 106 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || || ||||| ||| |||||||| || || | ||||| || || || Sbjct 105 ATGCCCTCCTTGTCTTGGATCTTCTGCTTCACGTTCTCGATCGTGTCGCTGGACTCCACC 46 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGC 288471 || || ||||| ||||| || || || ||||||||||| |||||| Sbjct 45 TCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAAGATCTGC 1 >seq71838 Length=148749 Score = 122 bits (134), Expect = 2e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || || || | ||| || || ||||| || ||||| ||| Sbjct 72816 CCACCACGGAGGCGGAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCG 72875 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | || || || | || || || ||||||||||||||||| ||| | ||| Sbjct 72876 AGGGTCCTGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCAGGAGGG 72935 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || ||||| || ||| || || ||||| || | ||| ||| || || Sbjct 72936 ATGCCCTCCTTGTCCTGAATCTTCTGCTTAACATTTTCGATGGTGTCGGACGACTCCACC 72995 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||| || || || ||||||||||| |||||||| Sbjct 72996 TCAAGGGTGATAGTCTTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 73042 >seq72197 Length=52184 Score = 120 bits (132), Expect = 7e-22 Identities = 166/233 (71%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || ||||| || | || || || ||||| || ||||| || Sbjct 20877 CCACCACGCAGGCGGAGCACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCAGCA 20818 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || ||||| || || ||||| || ||| Sbjct 20817 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATGAGGCGCTGCTGGTCGGGGGGG 20758 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| || |||||||| || || | ||||| || || || Sbjct 20757 ATGCCCTCCTTGTCCTGGATCTTYTGCTTCACGTTCTCGATCGTGTCGCTGGACTCCACC 20698 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGTT 288479 ||||| || || ||||| |||||||| ||||| || ||||||||||| |||| Sbjct 20697 TCGAGGGTAATGGTCTTGCCGGTCAGGGTCTTAACAAATATCTGCATGTTGTT 20645 Score = 87.8 bits (96), Expect = 4e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 288376 TTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTG 288435 || |||||||| ||| |||||||| || || | ||||| || || || ||||| || Sbjct 20976 TTGTCCTGGATCTTCTGCTTCACGTTCTCGATCGTGTCGCTGGACTCCACCTCGAGGGTA 20917 Query 288436 ATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| |||||||| ||||||||||| |||||||| Sbjct 20916 ATAGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 20879 >seq71540 Length=49709 Score = 107 bits (118), Expect = 5e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || || ||||| || || | ||| | || || ||||| ||||| |||||||| Sbjct 42959 CCCCCACGAAGTCTCAGCACCAAATGGAGGGTAGACTCCTTTTGAATATTGTAGTCGGCC 42900 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || || || || || ||||| || | ||| Sbjct 42899 AGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCAAAAATAAGTCGCTGCTGGTCAGGCGGG 42840 Query 288367 ATTCCTTCTTTATCCTGGAT-TTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 || || || || || || || ||| ||||| ||||||||||| | || || || || Sbjct 42839 ATGCCCTCCTTGTCTTGTATCTTTTGCTTT-ACGTTTTCTATGGTGTCTGAAGACTCCAC 42781 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || || |||||||| ||||| ||||| || || || ||||| Sbjct 42780 CTCGAGGGTAATGGTCTTCCCCGTCAGCGTCTTAACAAAGATTTGCAT 42733 >seq71924 Length=31871 Score = 95.1 bits (104), Expect = 3e-14 Identities = 123/170 (72%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 269152 ATCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTC 269211 ||||| ||||| ||||| |||||| || || ||||||||||| || || ||| || || Sbjct 8546 ATCGGCATGAACGCCGAGCTCATGTGCCAGTACATCGAATTCGTCGCCGACCGTCTCCTC 8487 Query 269212 ACGGCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTA 269271 ||| || || | |||||| | | | || || |||||| ||| ||||| || Sbjct 8486 GTGGCTCTTGGCTGTGAGAAGCATTTCCACAAGACCAACCCCTTCCCCTGGATGGAGCTT 8427 Query 269272 ATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTA 269321 || |||||||| || ||||| ||||||||||| ||||| |||| || Sbjct 8426 ATCTCGCTCGAGGGCAAGACCAACTTCTTCGAGCGTCGTGTTGGCGAGTA 8377 >seq30565 Length=160 Score = 95.1 bits (104), Expect = 3e-14 Identities = 87/110 (79%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||||| || || || |||||||| ||| |||||||| || || | ||||| || || Sbjct 23 GGGATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCAATGGTGTCGCTGGACTCC 82 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || ||||| ||||| || |||| |||||||||||| |||||||| Sbjct 83 ACTTCAAGGGTGATAGTCTTGCCAGTCAAAGTCTTGACGAAGATCTGCAT 132 >seq18015 Length=169 Score = 91.5 bits (100), Expect = 3e-13 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||||| || || || |||||||| ||| |||||||| || || | ||||| ||||| Sbjct 147 GGGATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATTGTGTCGCTGGATTCC 88 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| || || ||||| || |||| ||||||||||| |||||||| Sbjct 87 ACCTCGAGGGTAATGGTCTTGCCTGTCAAGGTCTTGACGAAGATCTGCAT 38 >seq71822 Length=82145 Score = 86.0 bits (94), Expect = 1e-11 Identities = 154/225 (68%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 288249 ACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAG 288308 |||||| || || | |||||||| | || || || ||||| || |||||||| || Sbjct 74658 ACCGCGCAGGCTTAAGACGAGATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCCAG 74599 Query 288309 CGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGAT 288368 |||| ||||| || | || || || |||||||| || ||||| || || || Sbjct 74598 GCTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGCTCGGGAGGAAT 74539 Query 288369 TCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTC 288428 || || || ||||| | | |||||| | | | | ||||| | | || || Sbjct 74538 GCCCTCCTTGGTCTGGACCTGCTGCTTCACGCTGTTGACCGTGTCGCTGGCCCCGACCTC 74479 Query 288429 GAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| ||||| ||||| ||||| || || |||||||||||| |||| Sbjct 74478 GAGAGTGATGGTCTTGCCGGTGAGGGTTTTGACGAATATCCGCAT 74434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178559956829658