Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20culbertsoni_20[genbank_20GCA_5F000826265.1_202015-01- 06] 72,411 sequences; 55,543,795 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq71838 102 3e-16 >seq71838 Length=148749 Score = 102 bits (112), Expect = 3e-16 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || || || || || ||||| || ||||| || || || || Sbjct 73042 ATGCAGATCTTCGTCAAGACCCTTACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTCC 72983 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| ||| | |||| || || ||||| || ||||| || || ||||||||||| Sbjct 72982 GACACCATCGAAAATGTTAAGCAGAAGATTCAGGACAAGGAGGGCATCCCTCCTGATCAG 72923 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || ||| | || || || || || ||||| || || | ||||| || || Sbjct 72922 CAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCAGGACCCTCGCGGACTACAAC 72863 Query 391230 ATTGATAAGGATGCAACACTTCAC 391253 || | ||||| | || || ||| Sbjct 72862 ATCCAGAAGGAGTCCACCCTCCAC 72839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1973885395766388