Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20culbertsoni_20[genbank_20GCA_5F000826265.1_202015-01- 06] 72,411 sequences; 55,543,795 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq71761 82.4 6e-11 >seq71761 Length=19511 Score = 82.4 bits (90), Expect = 6e-11 Identities = 141/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 ||| || || || || || || || ||||| ||||| | ||| | | || || | || Sbjct 8203 ATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGAGTGCGACCGTCCTCAAGCTG 8262 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 |||||| || || || | ||||| || ||||| ||||||||||| || || || || || Sbjct 8263 CTTACCGGCGAAGATAAGGCGCTGCTGGTCGGGGGGAATGCCTTCCTTGTCCTGGATCTT 8322 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 || || || | || | ||||| | || || || ||||| | || ||||| || Sbjct 8323 CTGCTTCACGTTCTCGATCGTGTCGCTGGACTCGACCTCGAGAGTAATGGTCTTGCCAGT 8382 Query 101446 TAAAGTTTTTACAAATATCTGCATG 101470 | || || || || ||||||||| Sbjct 8383 GAGGGTCTTGACGAAAATCTGCATG 8407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395928680720727