Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20culbertsoni_20[genbank_20GCA_5F000826265.1_202015-01- 06] 72,411 sequences; 55,543,795 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq72134 138 7e-27 seq71058 132 3e-25 seq72164 120 2e-21 seq72292 107 1e-17 seq71540 96.9 2e-14 seq71977 93.3 3e-13 seq71838 93.3 3e-13 seq71734 91.5 1e-12 seq71435 89.7 3e-12 seq69803 89.7 3e-12 seq69248 89.7 3e-12 seq69247 89.7 3e-12 seq72069 87.8 1e-11 seq68691 87.8 1e-11 >seq72134 Length=18862 Score = 138 bits (152), Expect = 7e-27 Identities = 493/769 (64%), Gaps = 10/769 (1%) Strand=Plus/Minus Query 879506 TGCCGATGGATCATTGATTACAAAGAAATTCAAATGGGAAAACAAATTGGTCAGGGTTCA 879565 ||||| ||||| || || ||||| || || ||| |||| ||||| || || | || || Sbjct 1518 TGCCGGTGGATTATCGACTACAACGAGATCCAAGTGGGCAAACAGATAGGGCTCGGGTCC 1459 Query 879566 TATGGCATTGTTTACAATGGTAAATGGAAAGGTGTTGAAGTTGCTGTTAAGAAATTTGTT 879625 || ||| | || |||| || || ||||| ||||| || || || || |||| || | Sbjct 1458 TACGGCGTGGTCTACAGGGGCAAGTGGAAGGGTGTCGAGGTCGCCGTCAAGAGGTTCATC 1399 Query 879626 AAACAAAAACTTTCCGAAAAACAAATGCTTGATTTTAGAGCTGAAGTTGCACTTTTATCT 879685 ||||| || ||| || | ||||| || || || ||||| | || | | || Sbjct 1398 AAACAGAAGCTTGATGAGCGCCGCATGCTAGAGTTCAGGGCTGAGATGGCCTTCCTTTCG 1339 Query 879686 GAACTAAGTCATCCTAATATTGTGGTATTTATTGGAGCTTGTTTAATGAAACCAGACATT 879745 || || || || || || ||| | || ||||| || || | | ||| || || | Sbjct 1338 GAGCTGCACCACCCCAACATCGTGCTCTTCATTGGCGCGTGCGTCAAGAAGCCCAACCTG 1279 Query 879746 TGTATTGTAACTGAATACATGAAAAATGGAAGTCTCAGAGATGTTCTTAAAAATACT--- 879802 || || || || |||| | |||| | || |||| ||| | ||| || | Sbjct 1278 TGCATCGTCACGGAATTCGTGAAGCAGGGTTCGCTCAAGGATATCCTTGGCAACGCCATG 1219 Query 879803 -CAAATTAAACTAGGATTTTCCACAAAAATGAAA-ATGCTTCTTGACGCAGCTAATGGTA 879860 | || || ||| || || || | ||||| ||||||| ||| | Sbjct 1218 GCCAAGCTCCCTTGGAAGCTC-----AAGTGTAGGATGCTCAGAAGCGCAGCTCTTGGAA 1164 Query 879861 TTAATTATTTACATACTTCACAACCGGTCATTGTTCATCGTGATATTAAACCAATGAATA 879920 | || ||| | ||| | || || || ||||| || | ||| | || ||| ||| Sbjct 1163 TCAACTATCTCCATTCGCTGCATCCAGTGATTGTCCACAGGGATCTCAAGCCATCGAACC 1104 Query 879921 TACTTGTTGATGAAAATTATAATGCTCGTGTTGCTGATTTTGGTTTTGCCAGGATTAAAG 879980 |||| || || || || | || | || || || ||||| || || | || |||| Sbjct 1103 TACTCGTAGACGAGAACTGGAACGTCAAGGTGGCCGACTTTGGCTTCGCGCGCATCAAAG 1044 Query 879981 CGGAAAATACTACTATGACAAGATGTGGTACTCCTTGTTGGACTGCTCCAGAAATCATTC 880040 ||| ||| | || ||||| | || || |||||||| ||||| || || ||||| ||| Sbjct 1043 AGGAGAATGCGACAATGACCCGCTGCGGCACTCCTTGCTGGACGGCGCCGGAAATACTTC 984 Query 880041 GTGGTGAAAAATATGACGAAAAGACCGATGTATTTTCATTTGGTATTGTTATGTGGGAAG 880100 | || ||||| |||||||||||| | || || || || ||||| | | |||||||| | Sbjct 983 GAGGCGAAAAGTATGACGAAAAGGCTGACGTCTTCTCGTTTGGCGTCATCATGTGGGAGG 924 Query 880101 TATTAACTGGTAAAGAACCTTTTGCAGGATATAATTTTATGAAAGTTTCTCTTGATATCT 880160 | | || | | | | || | || || || |||||| ||| || || ||| | Sbjct 923 TTCTCACGAGAAGACAGCCCTACGCCGGCCGAAACTTTATGGGAGTATCGCTCGATGTTC 864 Query 880161 TGGAAGGCGCAAGACCTCAAATACCTTCTGATTGTCCCATTAATCTAAAGAAACTCATTA 880220 | ||||| | | |||||||| || || ||||| | || | ||||| ||||| | Sbjct 863 TTGAAGGAAAACGGCCTCAAATCCCGAGCGACTGTCCGCTCGATTTCAAGAAGCTCATGA 804 Query 880221 AAAAGTGTTGGCACTCAAATGCGAACAAGAGACCTAGCATGGAAGAAGT 880269 | || || ||||| || || | ||| || || |||||||| || Sbjct 803 AGAAATGCTGGCATACAGATCCTGCCAAAAGGCCAGTAATGGAAGACGT 755 >seq71058 Length=57189 Score = 132 bits (146), Expect = 3e-25 Identities = 196/278 (71%), Gaps = 0/278 (0%) Strand=Plus/Minus Query 877979 CTCCGTCATCCAAATGTTGTGTTATTTATGGCTGCTTGCACAAAACCTCCCAAAATGTGT 878038 || || || || ||||| || ||||||||||| || | || || || || || |||| Sbjct 13335 CTTCGCCACCCCAATGTAGTCTTATTTATGGCCGCATCGACCAAGCCGCCGAAGCTGTGC 13276 Query 878039 ATTATCATGGAGCACATGTCACTTGGGTCAATGTATGAACTTTTAGAAAATGAACTTATT 878098 || | |||||| |||| | || |||||| |||| || || | | || || | ||| Sbjct 13275 ATAGTGATGGAGTTCATGGCTCTCGGGTCACTGTACGAGCTAATCCACAACGAGTTGATT 13216 Query 878099 CCAGATATTCCTCTAGAACTTAAAATTAAGATGGCATATCAAGCATCTAAAGGAATGCAT 878158 |||||||||||| | | || || | |||||| | ||||||| | || || |||||| Sbjct 13215 CCAGATATTCCTTTCGTGCTGAAGGTAAAGATGATACATCAAGCTGCCAAGGGGATGCAT 13156 Query 878159 TTCTTACACTCATCCGGCATTGTCCATAGAGATCTCAAGTCTCTTAATCTACTACTAGAT 878218 ||| | ||||| || ||||| | |||| | || || ||||| || ||||| || || || Sbjct 13155 TTCCTGCACTCGTCGGGCATCGCCCATCGCGACCTGAAGTCGCTCAATCTGCTTCTGGAC 13096 Query 878219 TCTAAATGGAATGTTAAAGTGAGTGATTTTGGTTTGAC 878256 || ||||| || ||||| || || ||| |||| Sbjct 13095 AACAAGTGGAACGTCAAAGTCTCCGACTTCGGTCTGAC 13058 >seq72164 Length=56620 Score = 120 bits (132), Expect = 2e-21 Identities = 192/276 (70%), Gaps = 0/276 (0%) Strand=Plus/Plus Query 877964 CGTGTCATGACTAAACTCCGTCATCCAAATGTTGTGTTATTTATGGCTGCTTGCACAAAA 878023 || ||||||| | || ||||| || || || ||| | || ||||| || ||||| || Sbjct 42876 CGGGTCATGAGCAGGCTGCGTCACCCGAACGTCGTGCTGTTCATGGCGGCGTGCACGAAG 42935 Query 878024 CCTCCCAAAATGTGTATTATCATGGAGCACATGTCACTTGGGTCAATGTATGAACTTTTA 878083 || |||| ||||| || ||||||| |||| | || || || | | || ||| | Sbjct 42936 CCGCCCACGATGTGCATCGTCATGGAATTCATGGCCCTCGGCTCCCTCCACGACCTTCTG 42995 Query 878084 GAAAATGAACTTATTCCAGATATTCCTCTAGAACTTAAAATTAAGATGGCATATCAAGCA 878143 | || || || |||||||| ||||| | || || | |||||||| | || || Sbjct 42996 CAGAACGAGCTCATTCCAGACATTCCGTATGGTCTCAAGGTCAAGATGGCCTTCCAGGCG 43055 Query 878144 TCTAAAGGAATGCATTTCTTACACTCATCCGGCATTGTCCATAGAGATCTCAAGTCTCTT 878203 | || || ||||| ||| | ||||| || ||||| || ||| | || ||||||||||| Sbjct 43056 GCCAAGGGCATGCACTTCCTGCACTCGTCGGGCATCGTGCATCGCGACCTCAAGTCTCTC 43115 Query 878204 AATCTACTACTAGATTCTAAATGGAATGTTAAAGTG 878239 || || || || || || || ||||| || || ||| Sbjct 43116 AACCTGCTTCTCGACTCCAAGTGGAACGTCAAGGTG 43151 >seq72292 Length=30951 Score = 107 bits (118), Expect = 1e-17 Identities = 173/249 (69%), Gaps = 0/249 (0%) Strand=Plus/Plus Query 879881 CAACCGGTCATTGTTCATCGTGATATTAAACCAATGAATATACTTGTTGATGAAAATTAT 879940 || ||||| || || ||||| || |||| || || | || || |||||||| | Sbjct 26550 CATCCGGTTATCGTGCATCGCGACCTTAAGCCTTCTAACTTGCTGGTGGATGAAAACTGG 26609 Query 879941 AATGCTCGTGTTGCTGATTTTGGTTTTGCCAGGATTAAAGCGGAAAATACTACTATGACA 880000 || | | || || || ||||||||||| | || || | ||| || | || |||||| Sbjct 26610 AACGTTAAGGTGGCGGACTTTGGTTTTGCTCGAATCAAGGAGGAGAACGCGACAATGACA 26669 Query 880001 AGATGTGGTACTCCTTGTTGGACTGCTCCAGAAATCATTCGTGGTGAAAAATATGACGAA 880060 | ||||| || || || ||||| || ||||| ||||| || || || || |||||||| Sbjct 26670 CGTTGTGGCACGCCATGCTGGACGGCGCCAGAGATCATCCGCGGCGAGAAGTATGACGAG 26729 Query 880061 AAGACCGATGTATTTTCATTTGGTATTGTTATGTGGGAAGTATTAACTGGTAAAGAACCT 880120 |||| || || || || ||| | | ||||||||||| | || | ||| ||||| Sbjct 26730 CGCGCCGACGTGTTCTCCTTCGGTGTCATCATGTGGGAAGTGGTGACGCGCAAACAACCT 26789 Query 880121 TTTGCAGGA 880129 || || ||| Sbjct 26790 TTCGCTGGA 26798 >seq71540 Length=49709 Score = 96.9 bits (106), Expect = 2e-14 Identities = 155/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||| | || || | ||| || ||| || || || ||| || || || || || Sbjct 42954 ACGAAGTCTCAGCACCAAATGGAGGGTAGACTCCTTTTGAATATTGTAGTCGGCCAGGGT 42895 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | || ||||| ||||| |||||||||||||| || || || ||||| || || || Sbjct 42894 GCGGCCGTCCTCAAGCTGCTTGCCAGCAAAAATAAGTCGCTGCTGGTCAGGCGGGATGCC 42835 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 ||||||||||| |||||||| || || ||| || || || | | | | || | Sbjct 42834 CTCCTTGTCTTGTATCTTTTGCTTTACGTTTTCTATGGTGTCTGAAGACTCCA-CCTCGA 42776 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||||| || || || || || |||||||| || ||||| Sbjct 42775 GGGTAATGGTCTTCCCCGTCAGCGTCTTAACAAAGATTTG 42736 >seq71977 Length=10979 Score = 93.3 bits (102), Expect = 3e-13 Identities = 182/269 (68%), Gaps = 0/269 (0%) Strand=Plus/Minus Query 877982 CGTCATCCAAATGTTGTGTTATTTATGGCTGCTTGCACAAAACCTCCCAAAATGTGTATT 878041 ||||| || || || ||| | || ||||| || ||||| | || || ||||| || Sbjct 5695 CGTCACCCGAACGTGGTGCTGTTCATGGCGGCGTGCACGAGGCCGCCACGCATGTGCATC 5636 Query 878042 ATCATGGAGCACATGTCACTTGGGTCAATGTATGAACTTTTAGAAAATGAACTTATTCCA 878101 | |||||| |||| | || || || | || || || | | ||||| || ||||| Sbjct 5635 GTGATGGAGTTCATGGCCCTCGGCTCCCTCTACGAGCTGCTGCACAATGAGCTCATTCCG 5576 Query 878102 GATATTCCTCTAGAACTTAAAATTAAGATGGCATATCAAGCATCTAAAGGAATGCATTTC 878161 || | || | | || || | |||||||| || || || | || || ||||| ||| Sbjct 5575 GAGCTGCCGCAGGCGCTCAAGGTGAAGATGGCGTACCAGGCGGCCAAGGGCATGCACTTC 5516 Query 878162 TTACACTCATCCGGCATTGTCCATAGAGATCTCAAGTCTCTTAATCTACTACTAGATTCT 878221 | ||||| || ||||| || || || ||||||||||| || || || || || || Sbjct 5515 CTTCACTCGTCGGGCATCGTGCACAGGGATCTCAAGTCGCTCAACCTGCTGCTGGACAAC 5456 Query 878222 AAATGGAATGTTAAAGTGAGTGATTTTGG 878250 || ||||| || || ||| || ||||| Sbjct 5455 AAGTGGAACGTCAAGGTGTCCGACTTTGG 5427 >seq71838 Length=148749 Score = 93.3 bits (102), Expect = 3e-13 Identities = 154/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| || ||||| ||||| || || || || || | || || || || || || Sbjct 72821 ACGGAGGCGGAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCGAGGGT 72880 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 ||| ||| || || ||||| || || || || ||||| || ||||||||||| || || Sbjct 72881 CCTGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCAGGAGGGATGCC 72940 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 |||||||| |||||||| || || ||| ||| || || || | | | | |||| Sbjct 72941 CTCCTTGTCCTGAATCTTCTGCTTAACATTTTCGATGGTGTCGGACGACTCCA-CCTCAA 72999 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 |||| ||||| || || || || ||||| ||||| || || Sbjct 73000 GGGTGATAGTCTTGCCCGTAAGGGTCTTGACGAAGATCTG 73039 >seq71734 Length=21317 Score = 91.5 bits (100), Expect = 1e-12 Identities = 215/322 (67%), Gaps = 2/322 (1%) Strand=Plus/Minus Query 879950 GTTGCTGATTTTGGTTTTGCCAGGATTAAAGCGGAAAATACTACTATGACAAGATGTGGT 880009 || || || |||||||| || | || || | ||| ||| | || ||||| | || || Sbjct 5527 GTGGCCGACTTTGGTTTCGCGCGCATCAAGGAGGAGAATGCCACAATGACGCGCTGCGGC 5468 Query 880010 ACTCCTTGTTGGACTGCTCCAGAAATCATTCGTGGTGAAAAATATGACGAAAAGACCGAT 880069 || || || ||||| || ||||| ||| | ||||| || || |||||||| | | |||| Sbjct 5467 ACGCCGTGCTGGACGGCGCCAGAGATCCTGCGTGGCGAGAAGTATGACGAGAGGGCCGAC 5408 Query 880070 GTATTTTCATTTGGTATTGTTATGTGGGAAGTATTAACTGGTAAAGAACCTTTTGCAGGA 880129 || | || || || || || |||||| | || | || | || || || || || ||| Sbjct 5407 GTTTACTCGTTCGGGATCGTCATGTGGCAGGTGCTGACGAGGAAGGAGCCCTTCGCTGGA 5348 Query 880130 TATAATTTTATGAAAGTTTCTCTTGATATCTTGGAAGGCGCAAGACCTCAAATACCTTCT 880189 || || ||| || || || || | | || ||| | ||||| || || Sbjct 5347 CGCAACTTCATGGGCGTGTCGCTGGACGTGCTCGAGGGCAAGCGTCCTCAGATTCCCGGA 5288 Query 880190 GATTGTCC-CATTAATCTAAAGAAACTCATTAAAAAGTGTTGGCACTCAAATGCGAACAA 880248 |||||||| || | | | ||||| | || || |||||||||||| | ||| || Sbjct 5287 GATTGTCCGCAAGACT-TCAAGAAGGTGATGAAGAAGTGTTGGCACGCTTCAGCGGCAAA 5229 Query 880249 GAGACCTAGCATGGAAGAAGTG 880270 ||| || | |||||||| ||| Sbjct 5228 GAGGCCCAAGATGGAAGATGTG 5207 >seq71435 Length=6145 Score = 89.7 bits (98), Expect = 3e-12 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 878087 AATGAACTTATTCCAGATATTCCTCTAGAACTTAAAATTAAGATGGCATATCAAGCATCT 878146 ||||| || |||||||| ||||| | | || | |||||||| || || || | Sbjct 5320 AATGAGCTCATTCCAGACATTCCGTTCATGTTGAAGAACAAGATGGCCTACCAGGCGGCC 5379 Query 878147 AAAGGAATGCATTTCTTACACTCATCCGGCATTGTCCATAGAGATCTCAAGTCTCTTAAT 878206 || || ||||| ||| | ||||| || ||||| || ||| | || ||||||||||| ||| Sbjct 5380 AAGGGCATGCACTTCCTGCACTCGTCGGGCATCGTGCATCGCGACCTCAAGTCTCTCAAT 5439 Query 878207 CTACTACTAGATTCTAAATGGAATGTTAAAGT 878238 || || || || || |||||||| || || || Sbjct 5440 CTGCTCCTCGACTCCAAATGGAACGTCAAGGT 5471 >seq69803 Length=9737 Score = 89.7 bits (98), Expect = 3e-12 Identities = 151/218 (69%), Gaps = 8/218 (4%) Strand=Plus/Plus Query 879888 TCATTGTTCATCGTGATATTAAACCAATGAATATACTTGTTGATGAAAATTATAATGCTC 879947 ||||||| |||||||| | || || ||| | || || || || ||| ||| | Sbjct 6833 TCATTGTACATCGTGACCTGAAGCCTTCGAACCTGCTCGTGGACGAGAAT----ATGAAC 6888 Query 879948 GTG----TTGCTGATTTTGGTTTTGCCAGGATTAAAGCGGAAAATACTACTATGACAAGA 880003 ||| | || || || || |||||| | || || | ||| ||| | || ||||| | Sbjct 6889 GTGAAGGTGGCCGACTTCGGATTTGCCCGCATCAAGGAGGAGAATGCCACCATGACCCGG 6948 Query 880004 TGTGGTACTCCTTGTTGGACTGCTCCAGAAATCATTCGTGGTGAAAAATATGACGAAAAG 880063 ||||| || || || ||||| || || || | || || || |||||||| |||||| Sbjct 6949 TGTGGCACGCCCTGCTGGACAGCGCCTGAGGTGATCCGAGGCGAAAAATACTCGGAAAAG 7008 Query 880064 ACCGATGTATTTTCATTTGGTATTGTTATGTGGGAAGT 880101 ||||| ||||||||||| || | ||||||||||| Sbjct 7009 GCCGATTGCTTTTCATTTGGCATCATCATGTGGGAAGT 7046 >seq69248 Length=10091 Score = 89.7 bits (98), Expect = 3e-12 Identities = 151/218 (69%), Gaps = 8/218 (4%) Strand=Plus/Plus Query 879888 TCATTGTTCATCGTGATATTAAACCAATGAATATACTTGTTGATGAAAATTATAATGCTC 879947 ||||||| |||||||| | || || ||| | || || || || ||| ||| | Sbjct 1295 TCATTGTACATCGTGACCTGAAGCCTTCGAACCTGCTCGTGGACGAGAAT----ATGAAC 1350 Query 879948 GTG----TTGCTGATTTTGGTTTTGCCAGGATTAAAGCGGAAAATACTACTATGACAAGA 880003 ||| | || || || || |||||| | || || | ||| ||| | || ||||| | Sbjct 1351 GTGAAGGTGGCCGACTTCGGATTTGCCCGCATCAAGGAGGAGAATGCCACCATGACCCGG 1410 Query 880004 TGTGGTACTCCTTGTTGGACTGCTCCAGAAATCATTCGTGGTGAAAAATATGACGAAAAG 880063 ||||| || || || ||||| || || || | || || || |||||||| |||||| Sbjct 1411 TGTGGCACGCCCTGCTGGACAGCGCCTGAGGTGATCCGAGGCGAAAAATACTCGGAAAAG 1470 Query 880064 ACCGATGTATTTTCATTTGGTATTGTTATGTGGGAAGT 880101 ||||| ||||||||||| || | ||||||||||| Sbjct 1471 GCCGATTGCTTTTCATTTGGCATCATCATGTGGGAAGT 1508 >seq69247 Length=10429 Score = 89.7 bits (98), Expect = 3e-12 Identities = 151/218 (69%), Gaps = 8/218 (4%) Strand=Plus/Plus Query 879888 TCATTGTTCATCGTGATATTAAACCAATGAATATACTTGTTGATGAAAATTATAATGCTC 879947 ||||||| |||||||| | || || ||| | || || || || ||| ||| | Sbjct 1295 TCATTGTACATCGTGACCTGAAGCCTTCGAACCTGCTCGTGGACGAGAAT----ATGAAC 1350 Query 879948 GTG----TTGCTGATTTTGGTTTTGCCAGGATTAAAGCGGAAAATACTACTATGACAAGA 880003 ||| | || || || || |||||| | || || | ||| ||| | || ||||| | Sbjct 1351 GTGAAGGTGGCCGACTTCGGATTTGCCCGCATCAAGGAGGAGAATGCCACCATGACCCGG 1410 Query 880004 TGTGGTACTCCTTGTTGGACTGCTCCAGAAATCATTCGTGGTGAAAAATATGACGAAAAG 880063 ||||| || || || ||||| || || || | || || || |||||||| |||||| Sbjct 1411 TGTGGCACGCCCTGCTGGACAGCGCCTGAGGTGATCCGAGGCGAAAAATACTCGGAAAAG 1470 Query 880064 ACCGATGTATTTTCATTTGGTATTGTTATGTGGGAAGT 880101 ||||| ||||||||||| || | ||||||||||| Sbjct 1471 GCCGATTGCTTTTCATTTGGCATCATCATGTGGGAAGT 1508 >seq72069 Length=69944 Score = 87.8 bits (96), Expect = 1e-11 Identities = 214/322 (66%), Gaps = 2/322 (1%) Strand=Plus/Minus Query 879950 GTTGCTGATTTTGGTTTTGCCAGGATTAAAGCGGAAAATACTACTATGACAAGATGTGGT 880009 || || || ||||| || || | || || | ||| ||| | || ||||| | ||||| Sbjct 27426 GTGGCCGACTTTGGCTTCGCGCGCATCAAGGAGGAGAATGCCACAATGACGCGCTGTGGC 27367 Query 880010 ACTCCTTGTTGGACTGCTCCAGAAATCATTCGTGGTGAAAAATATGACGAAAAGACCGAT 880069 || || || ||||| || ||||| ||| | || || | || |||||||| | | |||| Sbjct 27366 ACGCCGTGCTGGACAGCGCCAGAGATCCTGCGCGGCGCGAAGTATGACGAGAGGGCCGAC 27307 Query 880070 GTATTTTCATTTGGTATTGTTATGTGGGAAGTATTAACTGGTAAAGAACCTTTTGCAGGA 880129 || | || || || || || |||||| | | | || | || || ||||| || || Sbjct 27306 GTTTACTCGTTCGGAATCGTCATGTGGCAGGGGCTGACAAGGAAGGAGCCTTTCGCTGGT 27247 Query 880130 TATAATTTTATGAAAGTTTCTCTTGATATCTTGGAAGGCGCAAGACCTCAAATACCTTCT 880189 | || || ||| || || || || | |||| ||| | ||||| || || Sbjct 27246 CACAACTTCATGGGCGTGTCGCTGGACGTGCTGGAGGGCAAGCGTCCTCAGATTCCCGAC 27187 Query 880190 GATTGTCCCATTA-ATCTAAAGAAACTCATTAAAAAGTGTTGGCACTCAAATGCGAACAA 880248 || ||||| || | | || |||||| | || || |||||||||||| | ||| || Sbjct 27186 GACTGTCC-ATAAGACCTGAAGAAAGTGATGAAGAAGTGTTGGCACGCTTCAGCGGCAAA 27128 Query 880249 GAGACCTAGCATGGAAGAAGTG 880270 | | || | |||||||| ||| Sbjct 27127 GCGGCCCAAGATGGAAGATGTG 27106 >seq68691 Length=2609 Score = 87.8 bits (96), Expect = 1e-11 Identities = 125/176 (71%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 || || ||||| || || | | || || |||||||| || ||||| || || || || Sbjct 597 TTGTAGTCAGCGAGCGTGCGGCCGTCCTCGAGTTGCTTGCCGGCAAAGATGAGGCGCTGC 538 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 || || || ||||| || |||||||| || |||||||| || || ||||| || || Sbjct 537 TGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTTTGCTTCACGTTCTCAATGGTGTCG 478 Query 480714 GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || ||||||||||| || |||||||| ||||| ||||| || || Sbjct 477 CTGGACTCCACCTCGAGGGTAATAGTCTTGCCGGTGAGGGTCTTGACGAAGATCTG 422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3265073140871828