Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20culbertsoni_20[genbank_20GCA_5F000826265.1_202015-01- 06] 72,411 sequences; 55,543,795 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq71761 105 6e-18 >seq71761 Length=19511 Score = 105 bits (116), Expect = 6e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || || |||||||| || || ||||| |||||||| |||| ||| | | Sbjct 8178 ATGCAGATCTTCGTCAAAACGTTGACTGGCAAGACCATTACTCTCGAGGTCGAGTCCAGC 8119 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || ||| | || || |||||||| ||||| |||||| | ||| || || Sbjct 8118 GACACGATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAAGGCATCCCCCCCGACCAG 8059 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || | ||||||| || || || ||||| ||||| | | || |||| || |||||| Sbjct 8058 CAGCGTCTTATTTTCGCCGGCAAGCAGCTTGAGGACGGTCGCACTCTGGCCGACTACAAC 7999 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACT 110490 |||||||| |||||||| | ||| | ||||| |||| Sbjct 7998 ATTCAAAAGGAATCTACTCTCCACCTTGTGTTGCGACT 7961 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412477263546623