Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20culbertsoni_20[genbank_20GCA_5F000826265.1_202015-01- 06] 72,411 sequences; 55,543,795 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq72197 86.0 6e-12 >seq72197 Length=52184 Score = 86.0 bits (94), Expect = 6e-12 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 25166 TTAAACAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTC 25225 || ||||||||||| | ||||| || || | ||||| || | || || |||| || Sbjct 20642 TTCAACAACATGCAGATATTTGTTAAGACCCTGACCGGCAAGACCATTACCCTCGAGGTG 20701 Query 25226 GAAGCCAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCG 25285 || ||| ||| || |||||| | || || || || || || || ||||| || || Sbjct 20702 GAGTCCAGCGACACGATCGAGAACGTGAAGCARAAGATCCAGGACAAGGAGGGCATCCCC 20761 Query 25286 CCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGA 25329 ||||| ||||| | ||||||| || |||||| || ||||| || Sbjct 20762 CCCGACCAGCAGCGCCTCATTTTCGCCGGCAAGCAGCTCGAGGA 20805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444691528367520