Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20culbertsoni_20[genbank_20GCA_5F000826265.1_202015-01- 06] 72,411 sequences; 55,543,795 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq71761 82.4 6e-11 >seq71761 Length=19511 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| || || || ||||| |||||||||||||||||||| | || || || || Sbjct 8178 ATGCAGATCTTCGTCAAAACGTTGACTGGCAAGACCATTACTCTCGAGGTCGAGTCCAGC 8119 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | | | | ||||| || || || ||||| |||||| | ||| || || Sbjct 8118 GACACGATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAAGGCATCCCCCCCGACCAG 8059 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || | ||||||| || ||||| || | || || | ||| ||| ||| |||||| Sbjct 8058 CAGCGTCTTATTTTCGCCGGCAAGCAGCTTGAGGACGGTCGCACTCTGGCCGACTACAAC 7999 Query 106440 ATACAAAAAGAATCTACACTACA 106462 || ||||| |||||||| || || Sbjct 7998 ATTCAAAAGGAATCTACTCTCCA 7976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 401974540481888