Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20culbertsoni_20[genbank_20GCA_5F000826265.1_202015-01- 06] 72,411 sequences; 55,543,795 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq71838 165 2e-35 seq71761 163 7e-35 seq72303 156 1e-32 seq71072 150 4e-31 seq72113 147 5e-30 seq71540 145 2e-29 seq68691 145 2e-29 seq72197 140 8e-28 seq68586 138 3e-27 seq21823 134 3e-26 seq27395 123 6e-23 seq71822 114 3e-20 seq8701 114 3e-20 seq18015 107 5e-18 seq72134 105 2e-17 seq11134 105 2e-17 seq71843 100 7e-16 seq72244 96.9 8e-15 seq45493 93.3 1e-13 seq49378 91.5 4e-13 seq19292 89.7 1e-12 seq51973 87.8 4e-12 seq18432 87.8 4e-12 seq37805 84.2 5e-11 >seq71838 Length=148749 Score = 165 bits (182), Expect = 2e-35 Identities = 160/206 (78%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || || || || || || |||||||| |||||||| || ||| Sbjct 73039 CAGATCTTCGTCAAGACCCTTACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTCCGAC 72980 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || || || |||||||||||||| || || |||||||| || ||||| Sbjct 72979 ACCATCGAAAATGTTAAGCAGAAGATTCAGGACAAGGAGGGCATCCCTCCTGATCAGCAG 72920 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || |||||||| ||||| ||||| || || || || ||| || Sbjct 72919 CGTCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCAGGACCCTCGCGGACTACAACATC 72860 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || ||||| Sbjct 72859 CAGAAGGAGTCCACCCTCCACCTTGT 72834 >seq71761 Length=19511 Score = 163 bits (180), Expect = 7e-35 Identities = 167/218 (77%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| ||||| | || || || || || || |||||||| || | ||| Sbjct 8175 CAGATCTTCGTCAAAACGTTGACTGGCAAGACCATTACTCTCGAGGTCGAGTCCAGCGAC 8116 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||||||||| || || ||||| |||||||| ||||| ||||| || |||||||| Sbjct 8115 ACGATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAAGGCATCCCCCCCGACCAGCAG 8056 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||| |||||||| || ||||| || || || | ||||| ||||| || ||| | Sbjct 8055 CGTCTTATTTTCGCCGGCAAGCAGCTTGAGGACGGTCGCACTCTGGCCGACTACAACATT 7996 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAG 178141 ||||| ||||| || || || ||||| ||| ||||||| Sbjct 7995 CAAAAGGAATCTACTCTCCACCTTGTGTTGCGACTCAG 7958 Score = 156 bits (172), Expect = 1e-32 Identities = 158/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || ||||| || || || || || |||||||| || | ||| Sbjct 8403 CAGATTTTCGTCAAGACCCTCACTGGCAAGACCATTACTCTCGAGGTCGAGTCCAGCGAC 8344 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||||||||| || || ||||| |||||||| ||||| || || || |||||||| Sbjct 8343 ACGATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAAGGCATTCCCCCCGACCAGCAG 8284 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||||||||| || ||||| || || || | ||||| ||||| || ||| || Sbjct 8283 CGCCTTATCTTCGCCGGTAAGCAGCTTGAGGACGGTCGCACTCTGGCCGACTACAACATC 8224 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || ||||| || Sbjct 8223 CAGAAGGAGTCGACTCTCCATCTCGT 8198 >seq72303 Length=46806 Score = 156 bits (172), Expect = 1e-32 Identities = 158/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || || || || || || |||||||||||||||||| | ||| Sbjct 30326 CAGATCTTCGTCAAGACCCTTACGGGCAAGACCATCACCCTCGAGGTGGAATCCAGCGAC 30385 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| |||||||| || || ||||| |||||||| || || || || || |||||||| Sbjct 30386 ACCATTGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAG 30445 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || ||||| || || || | ||||| ||||| || ||| || Sbjct 30446 CGCCTCATCTTCGCCGGTAAGCAGCTTGAGGACGGTCGCACTCTGGCCGACTACAACATC 30505 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || ||||| || || || || Sbjct 30506 CAGAAGGAGTCAACTCTCCACCTCGT 30531 >seq71072 Length=54149 Score = 150 bits (166), Expect = 4e-31 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || ||||| || || || || || |||||||||||||| | ||| Sbjct 14045 CAGATCTTCGTCAAGACTCTTACCGGCAAGACTATTACCCTCGAGGTGGAGTCCAGCGAC 13986 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| |||||||| || || ||||| |||||||| || || || || || |||||||| Sbjct 13985 ACCATTGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAG 13926 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || |||||||| || || | || || ||||| || ||| | Sbjct 13925 CGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACCCTCGCCGACTACAACATT 13866 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 ||||| || || || || || ||||| Sbjct 13865 CAAAAGGAGTCGACTCTCCACCTTGT 13840 >seq72113 Length=77669 Score = 147 bits (162), Expect = 5e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || ||| | || || || || || || |||||||||||| | ||| Sbjct 39342 CAGATCTTCGTCAAGACTTTGACTGGCAAGACCATTACTCTCGAGGTGGAATCCAGCGAC 39401 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||||||||| || || ||||| |||||||| || || || || || |||||||| Sbjct 39402 ACGATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAG 39461 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||| |||||||| || ||||| || || || | ||||| ||||| || ||| || Sbjct 39462 CGCCTTATATTCGCCGGTAAGCAGCTTGAGGACGGTCGCACTCTGGCCGACTACAACATC 39521 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || ||||| || || || || Sbjct 39522 CAGAAGGAGTCAACTCTCCACCTCGT 39547 Score = 147 bits (162), Expect = 5e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || ||||| || || || || || || ||||||||||| | ||| Sbjct 39798 CAGATCTTCGTCAAGACTCTAACGGGCAAGACCATTACTCTCGAGGTGGAGTCCAGCGAC 39857 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||||||||| || || ||||| |||||||| || || || ||||| |||||||| Sbjct 39858 ACGATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATTCCTCCCGACCAGCAG 39917 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || |||||||| || || | || || || || || ||| || Sbjct 39918 CGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACCCTCGCTGACTACAACATC 39977 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 ||||| || || || || || || || Sbjct 39978 CAAAAGGAGTCTACCCTCCACCTCGT 40003 Score = 141 bits (156), Expect = 2e-28 Identities = 155/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || || || || || || || || ||||||||||| | ||| Sbjct 39570 CAGATCTTCGTCAAGACCCTTACGGGCAAGACCATTACTCTCGAGGTGGAGTCCAGCGAC 39629 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||||||||| || |||||||| |||||||| || || ||||| || |||||||| Sbjct 39630 ACGATCGAGAACGTGAAGCAAAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAG 39689 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || |||||||| || || | || || || || || ||| || Sbjct 39690 CGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCGCTGACTACAACATC 39749 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 39750 CAGAAGGAGTCTACCCTCCACCTCGT 39775 >seq71540 Length=49709 Score = 145 bits (160), Expect = 2e-29 Identities = 161/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || || || || || || || || |||||||||||||| |||||| Sbjct 42736 CAAATCTTTGTTAAGACGCTGACGGGGAAGACCATTACCCTCGAGGTGGAGTCTTCAGAC 42795 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || ||||| || |||||||| || ||||| || || ||||| || |||||||| Sbjct 42796 ACCATAGAAAACGTAAAGCAAAAGATACAAGACAAGGAGGGCATCCCGCCTGACCAGCAG 42855 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||||||| || || || || ||||| || || || | || || ||||| || || | Sbjct 42856 CGACTTATTTTTGCTGGCAAGCAGCTTGAGGACGGCCGCACCCTGGCCGACTACAATATT 42915 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 ||||| || || || || ||| | || ||||||| Sbjct 42916 CAAAAGGAGTCTACCCTCCATTTGGTGCTGAGACT 42950 >seq68691 Length=2609 Score = 145 bits (160), Expect = 2e-29 Identities = 134/170 (79%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 177960 ACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAA 178019 |||||||||||||| | |||||||| |||||||| || |||||||| |||||||| Sbjct 2 ACCCTCGAGGTGGAGTCCAGCGACACCATTGAGAACGTGAAGCAAAAGATCCAGGACAAG 61 Query 178020 GAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGA 178079 ||||| || || || |||||||| || |||||||||||||| || ||||| || || || Sbjct 62 GAAGGCATTCCCCCCGACCAGCAGCGCCTTATCTTCGCCGGTAAGCAGCTTGAGGACGGT 121 Query 178080 AGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 | ||||| ||||| || ||| |||| || || ||||| || || || || Sbjct 122 CGCACTCTGGCCGACTACAACATCCAGAAGGAGTCAACTCTCCACCTCGT 171 Score = 141 bits (156), Expect = 2e-28 Identities = 155/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || || || || || || || || ||||||||||| | ||| Sbjct 194 CAGATCTTCGTCAAGACCCTTACGGGCAAGACCATTACTCTCGAGGTGGAGTCCAGCGAC 253 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||||||||| || |||||||| |||||||| || || ||||| || |||||||| Sbjct 254 ACGATCGAGAACGTGAAGCAAAAGATCCAGGACAAGGAGGGCATCCCGCCCGACCAGCAG 313 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| ||||| || ||||| || || || | || || ||||| || ||| || Sbjct 314 CGCCTCATCTTTGCCGGCAAGCAGCTGGAGGACGGTCGCACCCTCGCCGACTACAACATC 373 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 ||||| || || || || || || || Sbjct 374 CAAAAGGAGTCGACTCTCCACCTCGT 399 Score = 141 bits (156), Expect = 2e-28 Identities = 155/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || || || |||||||||||||| | ||| Sbjct 422 CAGATCTTCGTCAAGACCCTCACCGGCAAGACTATTACCCTCGAGGTGGAGTCCAGCGAC 481 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| |||||||| || |||||||| |||||||| || || || || || |||||||| Sbjct 482 ACCATTGAGAACGTGAAGCAAAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAG 541 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| ||||| || || ||||| || || | || || || || || ||| || Sbjct 542 CGCCTCATCTTTGCCGGCAAGCAACTCGAGGACGGCCGCACGCTCGCTGACTACAACATC 601 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 ||||| || || || || || || || Sbjct 602 CAAAAGGAGTCTACCCTCCACCTCGT 627 >seq72197 Length=52184 Score = 140 bits (154), Expect = 8e-28 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || || || || || || || |||||||||||||| | ||| Sbjct 20654 CAGATATTTGTTAAGACCCTGACCGGCAAGACCATTACCCTCGAGGTGGAGTCCAGCGAC 20713 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||||||||| || || ||||| |||||||| || || ||||| || |||||||| Sbjct 20714 ACGATCGAGAACGTGAAGCARAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAG 20773 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || |||||||| || |||||||| || || | || ||||| || || ||| || Sbjct 20774 CGCCTCATTTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTTGCTGACTACAACATC 20833 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 20834 CAGAAGGAGTCGACTCTCCACCTCGT 20859 >seq68586 Length=2644 Score = 138 bits (152), Expect = 3e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || || || || || || |||||||| |||||||| | ||| Sbjct 2 CAGATCTTCGTCAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTGGAGTCCAGCGAC 61 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||||||||| || || ||||| || ||||| || || ||||| || |||||||| Sbjct 62 ACGATCGAGAACGTGAAGCAGAAGATCCAAGACAAGGAGGGCATCCCGCCCGACCAGCAG 121 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || || |||||||| || || | || ||||| || || ||| || Sbjct 122 CGCCTCATCTTCGCGGGCAAGCAGCTCGAGGACGGCCGCACCCTTGCTGACTACAACATC 181 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 182 CAGAAGGAGTCGACGCTCCACCTCGT 207 Score = 132 bits (146), Expect = 1e-25 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| ||||| | || || || || || || ||||||||||| | ||| Sbjct 458 CAGATCTTCGTCAAAACGTTGACTGGCAAGACCATTACTCTCGAGGTGGAGTCCAGCGAC 517 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||||||||| || || ||||| |||||||| || || || || || |||||||| Sbjct 518 ACGATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAG 577 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||| ||||| || || |||||||| || || | || || || || || ||| || Sbjct 578 CGTCTTATTTTCGCTGGCAAGCAGCTCGAGGACGGTCGCACCCTCGCTGACTACAACATC 637 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 ||||| || || || || || || || Sbjct 638 CAAAAGGAGTCTACCCTCCACCTCGT 663 >seq21823 Length=199 Score = 134 bits (148), Expect = 3e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || ||| | || || || || || || ||||||||||| | ||| Sbjct 198 CAGATCTTCGTCAAGACTTTGACTGGCAAGACCATTACTCTCGAGGTGGAGTCCAGCGAC 139 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||||||| | || || ||||| |||||||| || || ||||| || |||||||| Sbjct 138 ACGATCGAGAACCTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAGCAG 79 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||| |||||||| || |||||||| || || | || || ||||| || ||| || Sbjct 78 CGCCTTATTTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCGCCGACTACAACATC 19 Query 178104 CAAAAAGAATCAACACT 178120 || || || || || || Sbjct 18 CAGAAGGAGTCGACTCT 2 >seq27395 Length=133 Score = 123 bits (136), Expect = 6e-23 Identities = 106/131 (81%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 177966 GAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGA 178025 || ||||| ||||| ||||| ||||||||||| || || ||||| |||||||| || || Sbjct 132 GAAGTGGAGAGCTCGGACACGATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGC 73 Query 178026 ATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACT 178085 |||||||| |||||||| || ||||| |||||||| || |||||||| || || | || Sbjct 72 ATCCCTCCCGACCAGCAGCGCCTTATTTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACC 13 Query 178086 CTTGCCGATTA 178096 ||||| || || Sbjct 12 CTTGCTGACTA 2 >seq71822 Length=82145 Score = 114 bits (126), Expect = 3e-20 Identities = 155/215 (72%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 177927 ATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGT---GGAAAGCTCAGAC 177983 || ||||| ||||| ||||| || || || ||||| |||||||| || ||| ||| Sbjct 74440 ATATTCGTCAAAACCCTCACCGGCAAGACCATCACTCTCGAGGTCGGGGCCAGC---GAC 74496 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || | | ||| || || || | ||| ||| || || || ||||| || ||||| Sbjct 74497 ACGGTCAACAGCGTGAAGCAGCAGGTCCAGACCAAGGAGGGCATTCCTCCCGAGCAGCAG 74556 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||||||||| || |||||||| || || | | || ||||| || ||| || Sbjct 74557 CGCCTTATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCAGCCTGGCCGACTACAACATC 74616 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 || || || || || || ||||| || || || || Sbjct 74617 CAGAAGGAGTCGACTCTCCATCTCGTCTTAAGCCT 74651 >seq8701 Length=130 Score = 114 bits (126), Expect = 3e-20 Identities = 102/128 (80%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 177969 GTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATC 178028 ||||| ||||| ||||| ||||||||||| || || ||||| |||||||| || || || Sbjct 2 GTGGAGAGCTCGGACACGATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATT 61 Query 178029 CCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTT 178088 || || |||||||| || ||||| |||||||| || |||||||| || || | || ||| Sbjct 62 CCCCCTGACCAGCAGCGCCTTATTTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTT 121 Query 178089 GCCGATTA 178096 || || || Sbjct 122 GCTGACTA 129 >seq18015 Length=169 Score = 107 bits (118), Expect = 5e-18 Identities = 101/129 (78%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || | ||||| || || || ||||||||||||||| | ||| Sbjct 41 CAGATCTTCGTCAAGACCTTGACAGGCAAGACCATTACCCTCGAGGTGGAATCCAGCGAC 100 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||||||||| || || ||||| |||||||| || || |||||||| |||||||| Sbjct 101 ACAATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGTATCCCTCCCGACCAGCAG 160 Query 178044 CGACTTATC 178052 || || ||| Sbjct 161 CGCCTCATC 169 >seq72134 Length=18862 Score = 105 bits (116), Expect = 2e-17 Identities = 145/201 (72%), Gaps = 4/201 (2%) Strand=Plus/Plus Query 314836 TTCTGGTGACAACCTCCCATATCAATACTCCCAAAGAGAAGATGTCTGCTTTCTCATCGT 314895 |||| |||| ||||||||| || | || || || ||||||| ||| || || || || | Sbjct 912 TTCTCGTGAGAACCTCCCACATGATGACGCCAAACGAGAAGACGTCAGCCTTTTCGTCAT 971 Query 314896 ATTTTTCTCCTCTCAGCACTTCGGGAGCTGTGTAGCATGGAGAGCCACAACTTGTTTGTG 314955 | ||||| |||| || | ||| || || || |||| |||| ||| || | || || Sbjct 972 ACTTTTCGCCTCGAAGTATTTCCGGCGCCGTCCAGCAAGGAGTGCCGCAGCGGGTCATTG 1031 Query 314956 TAGCGCAACTT--TCTTTGAGGCGAGCGAACCCAAAGTCTGAAATTTTGGCGTTCCAGTT 315013 | |||| | ||||||| ||| ||||| |||||||| | | ||| |||||||||| Sbjct 1032 T--CGCATTCTCCTCTTTGATGCGCGCGAAGCCAAAGTCGGCCACCTTGACGTTCCAGTT 1089 Query 315014 CTCATCTACCAAAACGTTCGA 315034 ||| ||||| | | |||||| Sbjct 1090 CTCGTCTACGAGTAGGTTCGA 1110 >seq11134 Length=112 Score = 105 bits (116), Expect = 2e-17 Identities = 90/111 (81%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 177942 CTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAA 178001 || || || || || |||||||||||||||||| | |||||||| |||||||| || Sbjct 111 CTTACGGGCAAGACCATCACCCTCGAGGTGGAATCCAGCGACACCATTGAGAACGTGAAG 52 Query 178002 CAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATC 178052 |||||||| |||||||| || || |||||||| |||||||| || || ||| Sbjct 51 CAAAAGATCCAGGACAAGGAGGGTATCCCTCCCGACCAGCAGCGCCTCATC 1 >seq71843 Length=18661 Score = 100 bits (110), Expect = 7e-16 Identities = 87/108 (81%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 178022 AGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAG 178081 |||||||||||| |||||||| || |||||||||||||| || |||||||| ||||| | Sbjct 3323 AGGAATCCCTCCTGACCAGCAGCGTCTTATCTTCGCCGGCAAGCAGCTCGAGGATGGCCG 3382 Query 178082 GACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 |||||||| || || ||| |||| || || || || || || || || Sbjct 3383 CACTCTTGCTGACTACAACATCCAGAAGGAGTCCACTCTCCACCTGGT 3430 Score = 98.7 bits (108), Expect = 2e-15 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| || ||||| || || || ||||||||||||||||| || ||| Sbjct 3162 CAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTGGAGTCGTCCGAC 3221 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAAT 178027 ||||||||||| || || || |||||||||||||| || || || Sbjct 3222 ACCATCGAGAATGTGAAGCAGAAGATTCAGGACAAGGAGGGTAT 3265 >seq72244 Length=57428 Score = 96.9 bits (106), Expect = 8e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || ||||| | ||| | || || ||||| ||||| |||||||| | ||| Sbjct 28945 CAAATCTTTGTGAAGGCGCTCTCGGGGCGCACAATCACTCTCGAAGTGGAAAGTTGCGAC 28886 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| ||| || ||||| || | || ||||| ||||| | || || | || Sbjct 28885 ACCATAGAGGCAGTGAAACAGAAAGTGCACGACAAGGAAGGCGTACCGAAAGAACTACAG 28826 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||| |||| |||||| || ||||||||||| || | || || || || || ||| | Sbjct 28825 CGACTCATCTGCGCCGGCAAGCAGCTCGAAGACGGGAAAACGCTGGCTGACTACAACATT 28766 Query 178104 CAAAAAGAATC 178114 || |||||||| Sbjct 28765 CAGAAAGAATC 28755 >seq45493 Length=112 Score = 93.3 bits (102), Expect = 1e-13 Identities = 78/96 (81%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 177983 CACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCA 178042 ||| ||||||||||| || || ||||| |||||||| || || || ||||| |||||||| Sbjct 1 CACGATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATTCCTCCCGACCAGCA 60 Query 178043 ACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGG 178078 || ||||| ||||| || || |||||||| || || Sbjct 61 GCGTCTTATTTTCGCTGGCAAGCAGCTCGAGGACGG 96 >seq49378 Length=103 Score = 91.5 bits (100), Expect = 4e-13 Identities = 82/103 (80%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 177989 CGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACT 178048 ||||||||| || || ||||| |||||||| || || ||||| || |||||||| || || Sbjct 1 CGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGCCT 60 Query 178049 TATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCC 178091 ||||||||||| || ||||| || || || | ||||| ||| Sbjct 61 CATCTTCGCCGGTAAGCAGCTTGAGGACGGTCGCACTCTGGCC 103 >seq19292 Length=109 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 178026 ATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACT 178085 || ||||| |||||||| || ||||||||||||||||| ||||| || || || | || Sbjct 2 ATTCCTCCCGACCAGCAGCGCCTTATCTTCGCCGGAAAGCAGCTGGAGGACGGCCGCACC 61 Query 178086 CTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 ||||| || || ||| ||||||| || || || || || ||||| Sbjct 62 CTTGCTGACTACAACATCCAAAAGGAGTCTACCCTTCACCTTGT 105 >seq51973 Length=91 Score = 87.8 bits (96), Expect = 4e-12 Identities = 74/91 (81%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 177962 CCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGA 178021 |||||||||||| | ||||| ||||||||||| || |||||||| |||||||| || Sbjct 91 CCTCGAGGTGGAGTCCAGCGACACGATCGAGAACGTGAAGCAAAAGATCCAGGACAAGGA 32 Query 178022 AGGAATCCCTCCGGACCAGCAACGACTTATC 178052 || |||||||| |||||||| || || ||| Sbjct 31 GGGTATCCCTCCCGACCAGCAGCGCCTCATC 1 >seq18432 Length=100 Score = 87.8 bits (96), Expect = 4e-12 Identities = 75/93 (81%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 177986 CATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045 ||| |||||||| || || ||||| |||||||| || || || || || |||||||| || Sbjct 1 CATTGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAGCG 60 Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGG 178078 |||||||||||||| || ||||| || || || Sbjct 61 CCTTATCTTCGCCGGTAAGCAGCTTGAGGACGG 93 >seq37805 Length=113 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || ||||| || || || || || || || || ||||| ||||| ||| Sbjct 104 CAGATCTTCGTCAAGACTCTTACCGGCAAGACCATTACTCTGGAAGTGGAGAGCTCGGAC 45 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAAT 178027 || ||||||||||| || || ||||| |||||||| || || || Sbjct 44 ACGATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCAT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1202614419194734