Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20divionensis_20[genbank_20GCA_5F000826405.1_202015-01- 07] 107,714 sequences; 84,769,362 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq95767 84.2 1e-11 >seq95767 Length=2073 Score = 84.2 bits (92), Expect = 1e-11 Identities = 74/90 (82%), Gaps = 2/90 (2%) Strand=Plus/Minus Query 11443 TAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 ||||||| |||| |||| || |||||||||| ||||||| ||||||||||||| | Sbjct 1062 TAAAAAAAGAAAT-GGCCAGTGTGGGGATCGAACCCACGACCTTGGCGTTATTAGCACCA 1004 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCCGTC 11532 |||||| ||||||| |||||| ||||||| Sbjct 1003 CGCTCT-ACCAACTAAGCTAACCGGCCGTC 975 Lambda K H 0.639 0.410 0.921 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261147923668264