Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20divionensis_20[genbank_20GCA_5F000826405.1_202015-01- 07] 107,714 sequences; 84,769,362 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq105396 134 7e-27 >seq105396 Length=45554 Score = 134 bits (148), Expect = 7e-27 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 25921 CTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCT 25980 ||| ||| ||||||| || | ||| || | ||||| |||| || | |||||| |||| Sbjct 3327 CTCCACTCTCTCCATGAACAGATCGGGTACCCACAGAGCATGGAAGAGATCTCTGGCTCG 3386 Query 25981 CATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCA 26040 | ||||| || ||||| |||||||| || || || || ||||| || || | |||||| Sbjct 3387 CTGCTCTTCCTTGCCGTGGTTCTTTTTCAGCTCCAAAAACTCAAAGATGTCCGCGTGCCA 3446 Query 26041 TGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCT 26100 || || | |||||| || || || || || || || ||||||||||||||||| | Sbjct 3447 AGGCTCCAGATAGATTGCGAATGCTCCCTTCCTCTTGCCACCACCTTGATCTACGTAGCG 3506 Query 26101 TGCAGTTTCATTGAAAACTTTCAACATTGGAA 26132 ||| || |||||| | ||| || |||||||| Sbjct 3507 TGCTGTGTCATTGTACACTCGCAGCATTGGAA 3538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252707818102550