Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20divionensis_20[genbank_20GCA_5F000826405.1_202015-01- 07] 107,714 sequences; 84,769,362 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq107665 82.4 2e-12 seq107350 82.4 2e-12 seq107028 82.4 2e-12 seq106591 82.4 2e-12 seq106475 82.4 2e-12 seq106352 82.4 2e-12 seq106303 82.4 2e-12 seq106262 82.4 2e-12 seq106231 82.4 2e-12 seq106189 82.4 2e-12 seq105414 82.4 2e-12 seq105018 82.4 2e-12 seq104843 82.4 2e-12 seq104122 82.4 2e-12 seq103585 82.4 2e-12 seq103584 82.4 2e-12 seq101252 82.4 2e-12 seq100797 82.4 2e-12 seq100775 82.4 2e-12 seq100774 82.4 2e-12 seq100725 82.4 2e-12 seq100678 82.4 2e-12 seq100677 82.4 2e-12 seq100454 82.4 2e-12 seq100140 82.4 2e-12 seq100001 82.4 2e-12 seq98707 82.4 2e-12 seq98538 82.4 2e-12 seq97399 82.4 2e-12 seq97398 82.4 2e-12 seq96735 82.4 2e-12 seq94344 82.4 2e-12 seq94049 82.4 2e-12 seq93912 82.4 2e-12 seq105767 80.6 8e-12 seq103461 80.6 8e-12 seq103460 80.6 8e-12 seq107163 78.8 3e-11 >seq107665 Length=4708 Score = 82.4 bits (90), Expect = 2e-12 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 2775 GTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 ||||||||| ||| ||||| |||||||||||||||||||||| ||||||||| ||||| Sbjct 3377 GTAGCTCAGCTGGTAGAGCGTTAGACTGAAGATCTAAAGGTCGCTGGTTCAAACCCGG 3320 >seq107350 Length=14004 Score = 82.4 bits (90), Expect = 2e-12 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 2775 GTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 ||||||||| ||| ||||| |||||||||||||||||||||| ||||||||| ||||| Sbjct 9647 GTAGCTCAGCTGGTAGAGCGTTAGACTGAAGATCTAAAGGTCGCTGGTTCAAACCCGG 9704 >seq107028 Length=22487 Score = 82.4 bits (90), Expect = 2e-12 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 2775 GTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 ||||||||| ||| ||||| |||||||||||||||||||||| ||||||||| ||||| Sbjct 295 GTAGCTCAGCTGGTAGAGCGTTAGACTGAAGATCTAAAGGTCGCTGGTTCAAACCCGG 238 >seq106591 Length=79777 Score = 82.4 bits (90), Expect = 2e-12 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 2775 GTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 ||||||||| ||| ||||| |||||||||||||||||||||| ||||||||| ||||| Sbjct 4796 GTAGCTCAGCTGGTAGAGCGTTAGACTGAAGATCTAAAGGTCGCTGGTTCAAACCCGG 4739 >seq106475 Length=60324 Score = 82.4 bits (90), Expect = 2e-12 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 2775 GTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 ||||||||| ||| ||||| |||||||||||||||||||||| ||||||||| ||||| Sbjct 1240 GTAGCTCAGCTGGTAGAGCGTTAGACTGAAGATCTAAAGGTCGCTGGTTCAAACCCGG 1297 >seq106352 Length=115961 Score = 82.4 bits (90), Expect = 2e-12 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 2775 GTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 ||||||||| ||| ||||| |||||||||||||||||||||| ||||||||| ||||| Sbjct 87847 GTAGCTCAGCTGGTAGAGCGTTAGACTGAAGATCTAAAGGTCGCTGGTTCAAACCCGG 87904 >seq106303 Length=3819 Score = 82.4 bits (90), Expect = 2e-12 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 2775 GTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 ||||||||| ||| ||||| |||||||||||||||||||||| ||||||||| ||||| Sbjct 1356 GTAGCTCAGCTGGTAGAGCGTTAGACTGAAGATCTAAAGGTCGCTGGTTCAAACCCGG 1299 >seq106262 Length=38862 Score = 82.4 bits (90), Expect = 2e-12 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 2775 GTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 ||||||||| ||| ||||| |||||||||||||||||||||| ||||||||| ||||| Sbjct 435 GTAGCTCAGCTGGTAGAGCGTTAGACTGAAGATCTAAAGGTCGCTGGTTCAAACCCGG 492 >seq106231 Length=7278 Score = 82.4 bits (90), Expect = 2e-12 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 2775 GTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 ||||||||| ||| ||||| |||||||||||||||||||||| ||||||||| ||||| Sbjct 6255 GTAGCTCAGCTGGTAGAGCGTTAGACTGAAGATCTAAAGGTCGCTGGTTCAAACCCGG 6198 >seq106189 Length=3815 Score = 82.4 bits (90), Expect = 2e-12 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 2775 GTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 ||||||||| ||| ||||| |||||||||||||||||||||| ||||||||| ||||| Sbjct 401 GTAGCTCAGCTGGTAGAGCGTTAGACTGAAGATCTAAAGGTCGCTGGTTCAAACCCGG 344 >seq105414 Length=10110 Score = 82.4 bits (90), Expect = 2e-12 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 2775 GTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 ||||||||| ||| ||||| |||||||||||||||||||||| ||||||||| ||||| Sbjct 429 GTAGCTCAGCTGGTAGAGCGTTAGACTGAAGATCTAAAGGTCGCTGGTTCAAACCCGG 372 >seq105018 Length=4173 Score = 82.4 bits (90), Expect = 2e-12 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 2775 GTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 ||||||||| ||| ||||| |||||||||||||||||||||| ||||||||| ||||| Sbjct 1854 GTAGCTCAGCTGGTAGAGCGTTAGACTGAAGATCTAAAGGTCGCTGGTTCAAACCCGG 1911 >seq104843 Length=2220 Score = 82.4 bits (90), Expect = 2e-12 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 2775 GTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 ||||||||| ||| ||||| |||||||||||||||||||||| ||||||||| ||||| Sbjct 1059 GTAGCTCAGCTGGTAGAGCGTTAGACTGAAGATCTAAAGGTCGCTGGTTCAAACCCGG 1002 >seq104122 Length=10816 Score = 82.4 bits (90), Expect = 2e-12 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 2775 GTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 ||||||||| ||| ||||| |||||||||||||||||||||| ||||||||| ||||| Sbjct 3794 GTAGCTCAGCTGGTAGAGCGTTAGACTGAAGATCTAAAGGTCGCTGGTTCAAACCCGG 3737 >seq103585 Length=4345 Score = 82.4 bits (90), Expect = 2e-12 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 2775 GTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 ||||||||| ||| ||||| |||||||||||||||||||||| ||||||||| ||||| Sbjct 3485 GTAGCTCAGCTGGTAGAGCGTTAGACTGAAGATCTAAAGGTCGCTGGTTCAAACCCGG 3428 >seq103584 Length=3787 Score = 82.4 bits (90), Expect = 2e-12 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 2775 GTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 ||||||||| ||| ||||| |||||||||||||||||||||| ||||||||| ||||| Sbjct 3457 GTAGCTCAGCTGGTAGAGCGTTAGACTGAAGATCTAAAGGTCGCTGGTTCAAACCCGG 3400 >seq101252 Length=1841 Score = 82.4 bits (90), Expect = 2e-12 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 2775 GTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 ||||||||| ||| ||||| |||||||||||||||||||||| ||||||||| ||||| Sbjct 1283 GTAGCTCAGCTGGTAGAGCGTTAGACTGAAGATCTAAAGGTCGCTGGTTCAAACCCGG 1340 >seq100797 Length=7082 Score = 82.4 bits (90), Expect = 2e-12 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 2775 GTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 ||||||||| ||| ||||| |||||||||||||||||||||| ||||||||| ||||| Sbjct 3100 GTAGCTCAGCTGGTAGAGCGTTAGACTGAAGATCTAAAGGTCGCTGGTTCAAACCCGG 3157 >seq100775 Length=5246 Score = 82.4 bits (90), Expect = 2e-12 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 2775 GTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 ||||||||| ||| ||||| |||||||||||||||||||||| ||||||||| ||||| Sbjct 494 GTAGCTCAGCTGGTAGAGCGTTAGACTGAAGATCTAAAGGTCGCTGGTTCAAACCCGG 437 >seq100774 Length=5210 Score = 82.4 bits (90), Expect = 2e-12 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 2775 GTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 ||||||||| ||| ||||| |||||||||||||||||||||| ||||||||| ||||| Sbjct 488 GTAGCTCAGCTGGTAGAGCGTTAGACTGAAGATCTAAAGGTCGCTGGTTCAAACCCGG 431 >seq100725 Length=15711 Score = 82.4 bits (90), Expect = 2e-12 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 2775 GTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 ||||||||| ||| ||||| |||||||||||||||||||||| ||||||||| ||||| Sbjct 9690 GTAGCTCAGCTGGTAGAGCGTTAGACTGAAGATCTAAAGGTCGCTGGTTCAAACCCGG 9747 >seq100678 Length=4960 Score = 82.4 bits (90), Expect = 2e-12 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 2775 GTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 ||||||||| ||| ||||| |||||||||||||||||||||| ||||||||| ||||| Sbjct 4522 GTAGCTCAGCTGGTAGAGCGTTAGACTGAAGATCTAAAGGTCGCTGGTTCAAACCCGG 4465 >seq100677 Length=4883 Score = 82.4 bits (90), Expect = 2e-12 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 2775 GTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 ||||||||| ||| ||||| |||||||||||||||||||||| ||||||||| ||||| Sbjct 4528 GTAGCTCAGCTGGTAGAGCGTTAGACTGAAGATCTAAAGGTCGCTGGTTCAAACCCGG 4471 >seq100454 Length=1772 Score = 82.4 bits (90), Expect = 2e-12 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 2775 GTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 ||||||||| ||| ||||| |||||||||||||||||||||| ||||||||| ||||| Sbjct 860 GTAGCTCAGCTGGTAGAGCGTTAGACTGAAGATCTAAAGGTCGCTGGTTCAAACCCGG 917 >seq100140 Length=5014 Score = 82.4 bits (90), Expect = 2e-12 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 2775 GTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 ||||||||| ||| ||||| |||||||||||||||||||||| ||||||||| ||||| Sbjct 4303 GTAGCTCAGCTGGTAGAGCGTTAGACTGAAGATCTAAAGGTCGCTGGTTCAAACCCGG 4246 >seq100001 Length=4167 Score = 82.4 bits (90), Expect = 2e-12 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 2775 GTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 ||||||||| ||| ||||| |||||||||||||||||||||| ||||||||| ||||| Sbjct 2314 GTAGCTCAGCTGGTAGAGCGTTAGACTGAAGATCTAAAGGTCGCTGGTTCAAACCCGG 2257 >seq98707 Length=10784 Score = 82.4 bits (90), Expect = 2e-12 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 2775 GTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 ||||||||| ||| ||||| |||||||||||||||||||||| ||||||||| ||||| Sbjct 7009 GTAGCTCAGCTGGTAGAGCGTTAGACTGAAGATCTAAAGGTCGCTGGTTCAAACCCGG 7066 >seq98538 Length=1677 Score = 82.4 bits (90), Expect = 2e-12 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 2775 GTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 ||||||||| ||| ||||| |||||||||||||||||||||| ||||||||| ||||| Sbjct 589 GTAGCTCAGCTGGTAGAGCGTTAGACTGAAGATCTAAAGGTCGCTGGTTCAAACCCGG 532 >seq97399 Length=2776 Score = 82.4 bits (90), Expect = 2e-12 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 2775 GTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 ||||||||| ||| ||||| |||||||||||||||||||||| ||||||||| ||||| Sbjct 2288 GTAGCTCAGCTGGTAGAGCGTTAGACTGAAGATCTAAAGGTCGCTGGTTCAAACCCGG 2345 >seq97398 Length=2765 Score = 82.4 bits (90), Expect = 2e-12 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 2775 GTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 ||||||||| ||| ||||| |||||||||||||||||||||| ||||||||| ||||| Sbjct 2288 GTAGCTCAGCTGGTAGAGCGTTAGACTGAAGATCTAAAGGTCGCTGGTTCAAACCCGG 2345 >seq96735 Length=3729 Score = 82.4 bits (90), Expect = 2e-12 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 2775 GTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 ||||||||| ||| ||||| |||||||||||||||||||||| ||||||||| ||||| Sbjct 2752 GTAGCTCAGCTGGTAGAGCGTTAGACTGAAGATCTAAAGGTCGCTGGTTCAAACCCGG 2809 >seq94344 Length=2204 Score = 82.4 bits (90), Expect = 2e-12 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 2775 GTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 ||||||||| ||| ||||| |||||||||||||||||||||| ||||||||| ||||| Sbjct 1175 GTAGCTCAGCTGGTAGAGCGTTAGACTGAAGATCTAAAGGTCGCTGGTTCAAACCCGG 1232 >seq94049 Length=3286 Score = 82.4 bits (90), Expect = 2e-12 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 2775 GTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 ||||||||| ||| ||||| |||||||||||||||||||||| ||||||||| ||||| Sbjct 163 GTAGCTCAGCTGGTAGAGCGTTAGACTGAAGATCTAAAGGTCGCTGGTTCAAACCCGG 106 >seq93912 Length=1558 Score = 82.4 bits (90), Expect = 2e-12 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 2775 GTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 ||||||||| ||| ||||| |||||||||||||||||||||| ||||||||| ||||| Sbjct 253 GTAGCTCAGCTGGTAGAGCGTTAGACTGAAGATCTAAAGGTCGCTGGTTCAAACCCGG 196 >seq105767 Length=20489 Score = 80.6 bits (88), Expect = 8e-12 Identities = 52/57 (91%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 |||||||| ||| ||||| |||||||||||||||||||||| ||||||||| ||||| Sbjct 18130 TAGCTCAGCTGGTAGAGCGTTAGACTGAAGATCTAAAGGTCGCTGGTTCAAACCCGG 18186 >seq103461 Length=4700 Score = 80.6 bits (88), Expect = 8e-12 Identities = 52/57 (91%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 |||||||| ||| ||||| |||||||||||||||||||||| ||||||||| ||||| Sbjct 1639 TAGCTCAGCTGGTAGAGCGTTAGACTGAAGATCTAAAGGTCGCTGGTTCAAACCCGG 1583 >seq103460 Length=4754 Score = 80.6 bits (88), Expect = 8e-12 Identities = 52/57 (91%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 |||||||| ||| ||||| |||||||||||||||||||||| ||||||||| ||||| Sbjct 1639 TAGCTCAGCTGGTAGAGCGTTAGACTGAAGATCTAAAGGTCGCTGGTTCAAACCCGG 1583 >seq107163 Length=2951 Score = 78.8 bits (86), Expect = 3e-11 Identities = 52/58 (90%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 2775 GTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 ||||||||| ||| ||||| |||||||||||||||||||||| |||||||| ||||| Sbjct 1558 GTAGCTCAGCTGGTAGAGCGTTAGACTGAAGATCTAAAGGTCGTTGGTTCAAACCCGG 1615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15830927239530