Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20healyi_20[genbank_20GCA_5F000826305.1_202015-01-07] 26,188 sequences; 75,318,243 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq25559 89.7 1e-12 >seq25559 Length=72922 Score = 89.7 bits (98), Expect = 1e-12 Identities = 141/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 157244 ACCCCGGGCTTGCTGTACTCGGCCACTCTATTCTCAAAAAAGTTGGTCTTTCCCTGGAGA 157303 || |||| |||| ||||||| | || | | ||| || ||||||||||| |||| ||| Sbjct 48032 ACGCCGGCCTTGGCGTACTCGCCGACGCGACGCTCGAAGAAGTTGGTCTTGCCCTCGAGG 47973 Query 157304 GAAATCATGTCCATCCACTCGAATGGGTTGGCGCAGTTGTACACCTTGTCGTACCCCAGC 157363 ||||| | |||||||| ||| ||||||| |||||| ||||||| | || || Sbjct 47972 GAAATGAGCTCCATCCAGGGGAACGGGTTGGTCTGGTTGTAGTGCTTGTCGCAGCCGAGA 47913 Query 157364 TGGTTCAGCCAGTAGTCCGCCACAAACTTGATGTACTCTGTCATGCTCTTCTCGCTGATA 157423 | || | |||||| || |||| |||||||| |||| | || | || Sbjct 47912 GCGACGAGAAGGCGGTCCGCGACGAACTCGATGTACTGGCACATGAGCGCGGCGTTCATG 47853 Query 157424 CCGATGAGCGCGACGGGAAGCG 157445 |||||||| |||||||| |||| Sbjct 47852 CCGATGAGGGCGACGGGGAGCG 47831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073406115133184