Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20healyi_20[genbank_20GCA_5F000826305.1_202015-01-07] 26,188 sequences; 75,318,243 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq22622 84.2 2e-11 >seq22622 Length=4454 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 || |||||||| || || || |||||||| ||| || | | |||| || | || Sbjct 1500 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGC 1441 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280 ||||| ||| | |||| ||| || |||||| || || || || ||||| || || Sbjct 1440 TTGCCGGCGAAGATCAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTC 1381 Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340 ||| || | || ||||||||||| || || || | || ||||| ||||| ||| Sbjct 1380 TGCTTCACGTTCTCAATGGTATCGCTCGACTCAACCTCGAGCGTGATGGTCTTACCGGTC 1321 Query 15341 AGAGTTTTTACAAAAATTTGCATA 15364 ||||| || || || || |||||| Sbjct 1320 AGAGTCTTGACGAAGATCTGCATA 1297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362063604622908